mRNA_M-pyrifera_M_contig107055.1510.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107055.1510.1 vs. uniprot
Match: A0A452DSG1_CAPHI (Anaphase-promoting complex subunit 10 n=2 Tax=Boreoeutheria TaxID=1437010 RepID=A0A452DSG1_CAPHI) HSP 1 Score: 147 bits (371), Expect = 1.830e-42 Identity = 65/133 (48.87%), Postives = 93/133 (69.92%), Query Frame = 1 Query: 1 TSSHRCINDRAVWNLSGARPGNGVDELLDDDLSTFWQSDGSQPHLITLRFYERETVLGIALYVDYASDESYCPQKLSIRAGHILHNLRVVRDVELDRPTGWVWIPLSDPDLEGVRPLRVHLVQVAITQMHQSG 399 T + R I +AVW+LS +PG GVD+L DD+L T+WQSDGSQPHL+ ++F + TV + +YVDY SDESY P K+S+R G+ HNL+ +R +EL PTGW+ +PL+D +P R ++Q+A+ HQ+G Sbjct: 19 TGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFGRKTTVKALCIYVDYKSDESYTPSKISVRVGNSFHNLQEIRQLELVEPTGWIHVPLTD---NHKKPTRTFMIQIAVLANHQNG 148
BLAST of mRNA_M-pyrifera_M_contig107055.1510.1 vs. uniprot
Match: A0A8B9I867_9AVES (Anaphase-promoting complex subunit 10 n=5 Tax=Neognathae TaxID=8825 RepID=A0A8B9I867_9AVES) HSP 1 Score: 147 bits (372), Expect = 2.600e-42 Identity = 64/133 (48.12%), Postives = 94/133 (70.68%), Query Frame = 1 Query: 1 TSSHRCINDRAVWNLSGARPGNGVDELLDDDLSTFWQSDGSQPHLITLRFYERETVLGIALYVDYASDESYCPQKLSIRAGHILHNLRVVRDVELDRPTGWVWIPLSDPDLEGVRPLRVHLVQVAITQMHQSG 399 T + R I +AVW+LS +PG GVD+L DD+L T+WQSDGSQPHL+ ++F + TV + +Y DY SDESY P K+S+R G+ HNL+ +R +EL P+GW+ +PL+DP +P+R ++Q+A+ HQ+G Sbjct: 31 TGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDPHK---KPIRTFMIQIAVLANHQNG 160
BLAST of mRNA_M-pyrifera_M_contig107055.1510.1 vs. uniprot
Match: A0A8K1FCQ9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCQ9_PYTOL) HSP 1 Score: 146 bits (368), Expect = 3.540e-42 Identity = 67/129 (51.94%), Postives = 96/129 (74.42%), Query Frame = 1 Query: 13 RCINDRAVWNLSGARPGNGVDELLDDDLSTFWQSDGSQPHLITLRFYERETVLGIALYVDYASDESYCPQKLSIRAGHILHNLRVVRDVELDRPTGWVWIPLSDPDLEGVRPLRVHLVQVAITQMHQSG 399 R I D AVW+LS A+PGNGVD+L D+++ T+WQSDGSQPHLI ++F+++ T+ IALY+D+ DESY P+K+SIRAG +H+L+ + +++ P GWV I L+ PD + PLR +QVA+ MHQ+G Sbjct: 6 REIGDDAVWSLSSAKPGNGVDQLRDNNVDTYWQSDGSQPHLINIQFFKKMTISEIALYLDHKLDESYTPRKISIRAGSTVHDLKEILAQDIEEPNGWVSIQLAGPD-DPETPLRTFFLQVAVLAMHQNG 133
BLAST of mRNA_M-pyrifera_M_contig107055.1510.1 vs. uniprot
Match: A0A8B9FEL8_9PSIT (Anaphase-promoting complex subunit 10 n=7 Tax=Neognathae TaxID=8825 RepID=A0A8B9FEL8_9PSIT) HSP 1 Score: 144 bits (364), Expect = 1.390e-41 Identity = 63/133 (47.37%), Postives = 93/133 (69.92%), Query Frame = 1 Query: 1 TSSHRCINDRAVWNLSGARPGNGVDELLDDDLSTFWQSDGSQPHLITLRFYERETVLGIALYVDYASDESYCPQKLSIRAGHILHNLRVVRDVELDRPTGWVWIPLSDPDLEGVRPLRVHLVQVAITQMHQSG 399 T + R I +AVW+LS +PG GVD+L DD+L T+WQSDGSQPHL+ ++F + TV + +Y DY SDESY P K+S+R G+ HNL+ +R +EL P+GW+ +PL+D +P+R ++Q+A+ HQ+G Sbjct: 19 TGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDTHK---KPIRTFMIQIAVLANHQNG 148
BLAST of mRNA_M-pyrifera_M_contig107055.1510.1 vs. uniprot
Match: G3W7S4_SARHA (Anaphase-promoting complex subunit 10 n=3 Tax=Tetrapoda TaxID=32523 RepID=G3W7S4_SARHA) HSP 1 Score: 144 bits (364), Expect = 1.430e-41 Identity = 63/133 (47.37%), Postives = 93/133 (69.92%), Query Frame = 1 Query: 1 TSSHRCINDRAVWNLSGARPGNGVDELLDDDLSTFWQSDGSQPHLITLRFYERETVLGIALYVDYASDESYCPQKLSIRAGHILHNLRVVRDVELDRPTGWVWIPLSDPDLEGVRPLRVHLVQVAITQMHQSG 399 T + R I +AVW+LS +PG GVD+L DD+L T+WQSDGSQPHL+ ++F + TV + +Y DY SDESY P K+S+R G+ HNL+ +R +EL P+GW+ +PL+D +P+R ++Q+A+ HQ+G Sbjct: 19 TGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDSHK---KPIRTFMIQIAVLANHQNG 148
BLAST of mRNA_M-pyrifera_M_contig107055.1510.1 vs. uniprot
Match: A0A5D6Y3X3_9STRA (Anaphase-promoting complex subunit 10 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3X3_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.560e-41 Identity = 65/132 (49.24%), Postives = 92/132 (69.70%), Query Frame = 1 Query: 7 SHRCINDRAVWNLSGARPGNGVDELLDDDLSTFWQSDGSQPHLITLRFYERETVLGIALYVDYASDESYCPQKLSIRAGHILHNLRVVRDVELDRPTGWVWIPLSDPDLEGVR-PLRVHLVQVAITQMHQSG 399 + R + D AVW+LS A+PGNGVD+L D+++ T+WQSDGSQPHLI ++F + ++ +ALY+DY DESY P+KLS+R G LH+LR + + P+GWV IPL D + PLR +Q+A+ MHQ+G Sbjct: 6 ARREVGDEAVWSLSTAKPGNGVDQLRDNNVDTYWQSDGSQPHLINIQFQRKTALVALALYLDYKLDESYTPKKLSLRCGATLHDLREIHTQSIAEPSGWVTIPLRAADSDDTEAPLRTFFLQIAVVAMHQNG 137
BLAST of mRNA_M-pyrifera_M_contig107055.1510.1 vs. uniprot
Match: A0A091JHC0_EGRGA (Anaphase-promoting complex subunit 10 n=247 Tax=Aves TaxID=8782 RepID=A0A091JHC0_EGRGA) HSP 1 Score: 144 bits (364), Expect = 2.100e-41 Identity = 63/133 (47.37%), Postives = 93/133 (69.92%), Query Frame = 1 Query: 1 TSSHRCINDRAVWNLSGARPGNGVDELLDDDLSTFWQSDGSQPHLITLRFYERETVLGIALYVDYASDESYCPQKLSIRAGHILHNLRVVRDVELDRPTGWVWIPLSDPDLEGVRPLRVHLVQVAITQMHQSG 399 T + R I +AVW+LS +PG GVD+L DD+L T+WQSDGSQPHL+ ++F + TV + +Y DY SDESY P K+S+R G+ HNL+ +R +EL P+GW+ +PL+D +P+R ++Q+A+ HQ+G Sbjct: 19 TGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDTHK---KPIRTFMIQIAVLANHQNG 148
BLAST of mRNA_M-pyrifera_M_contig107055.1510.1 vs. uniprot
Match: F7DUE6_ORNAN (Anaphase-promoting complex subunit 10 n=90 Tax=Euteleostomi TaxID=117571 RepID=F7DUE6_ORNAN) HSP 1 Score: 144 bits (364), Expect = 2.100e-41 Identity = 63/133 (47.37%), Postives = 93/133 (69.92%), Query Frame = 1 Query: 1 TSSHRCINDRAVWNLSGARPGNGVDELLDDDLSTFWQSDGSQPHLITLRFYERETVLGIALYVDYASDESYCPQKLSIRAGHILHNLRVVRDVELDRPTGWVWIPLSDPDLEGVRPLRVHLVQVAITQMHQSG 399 T + R I +AVW+LS +PG GVD+L DD+L T+WQSDGSQPHL+ ++F + TV + +Y DY SDESY P K+S+R G+ HNL+ +R +EL P+GW+ +PL+D +P+R ++Q+A+ HQ+G Sbjct: 19 TGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDAHK---KPIRTFMIQIAVLANHQNG 148
BLAST of mRNA_M-pyrifera_M_contig107055.1510.1 vs. uniprot
Match: A0A7N4PM23_SARHA (Anaphase-promoting complex subunit 10 n=22 Tax=Amniota TaxID=32524 RepID=A0A7N4PM23_SARHA) HSP 1 Score: 144 bits (364), Expect = 2.100e-41 Identity = 63/133 (47.37%), Postives = 93/133 (69.92%), Query Frame = 1 Query: 1 TSSHRCINDRAVWNLSGARPGNGVDELLDDDLSTFWQSDGSQPHLITLRFYERETVLGIALYVDYASDESYCPQKLSIRAGHILHNLRVVRDVELDRPTGWVWIPLSDPDLEGVRPLRVHLVQVAITQMHQSG 399 T + R I +AVW+LS +PG GVD+L DD+L T+WQSDGSQPHL+ ++F + TV + +Y DY SDESY P K+S+R G+ HNL+ +R +EL P+GW+ +PL+D +P+R ++Q+A+ HQ+G Sbjct: 19 TGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDSHK---KPIRTFMIQIAVLANHQNG 148
BLAST of mRNA_M-pyrifera_M_contig107055.1510.1 vs. uniprot
Match: A0A8B9RQR6_9AVES (Anaphase-promoting complex subunit 10 n=2 Tax=Neognathae TaxID=8825 RepID=A0A8B9RQR6_9AVES) HSP 1 Score: 144 bits (364), Expect = 2.510e-41 Identity = 63/133 (47.37%), Postives = 93/133 (69.92%), Query Frame = 1 Query: 1 TSSHRCINDRAVWNLSGARPGNGVDELLDDDLSTFWQSDGSQPHLITLRFYERETVLGIALYVDYASDESYCPQKLSIRAGHILHNLRVVRDVELDRPTGWVWIPLSDPDLEGVRPLRVHLVQVAITQMHQSG 399 T + R I +AVW+LS +PG GVD+L DD+L T+WQSDGSQPHL+ ++F + TV + +Y DY SDESY P K+S+R G+ HNL+ +R +EL P+GW+ +PL+D +P+R ++Q+A+ HQ+G Sbjct: 19 TGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDTHK---KPIRTFMIQIAVLANHQNG 148 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107055.1510.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107055.1510.1 >prot_M-pyrifera_M_contig107055.1510.1 ID=prot_M-pyrifera_M_contig107055.1510.1|Name=mRNA_M-pyrifera_M_contig107055.1510.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp TSSHRCINDRAVWNLSGARPGNGVDELLDDDLSTFWQSDGSQPHLITLRFback to top mRNA from alignment at M-pyrifera_M_contig107055:2..539- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107055.1510.1 ID=mRNA_M-pyrifera_M_contig107055.1510.1|Name=mRNA_M-pyrifera_M_contig107055.1510.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=538bp|location=Sequence derived from alignment at M-pyrifera_M_contig107055:2..539- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107055:2..539- >mRNA_M-pyrifera_M_contig107055.1510.1 ID=mRNA_M-pyrifera_M_contig107055.1510.1|Name=mRNA_M-pyrifera_M_contig107055.1510.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig107055:2..539- (Macrocystis pyrifera P11B4 male)back to top |