mRNA_M-pyrifera_M_contig107040.1505.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107040.1505.1 vs. uniprot
Match: A0A061RY46_9CHLO (Arm repeat-containing protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RY46_9CHLO) HSP 1 Score: 112 bits (281), Expect = 1.010e-26 Identity = 70/208 (33.65%), Postives = 111/208 (53.37%), Query Frame = 1 Query: 7 LAPYVPELMSTFLENRSNVEPETRQYFAQKTDEIGITPEEMENLRVSLSKSSPMSETLDICAERVGPSNVKQVAVMLLHLVRHGVGMPTHVGTANFVARLCRSAGGAFKRYASKLIKPALEHL-CSPSSAIRKAYAGTLAAIASIVPSSHTSALLVELRRLY--CEKGELLHRQATIVTLQALAHAATVKLKDNNVDCVPLAFLGTCD 621 L ++PEL+ LE+ S +E + Y Q + G++ + +E+ RVS SKS+PMS+TLD+CA + P ++ + L+ L++ GVG+ T GTANFVA+L G + + LIK L PS+A+R++YA T A +A S + LL E ++ + G+ + ++ +A A L N +PLAFL D Sbjct: 19 LQAHIPELVPAMLESLSQLEDQRLNYLEQHAERYGVSADRLESARVSASKSTPMSDTLDLCARQCRPDTLEGLVPKLVALIKRGVGLNTRCGTANFVAQLSMRHGSDMRPHTGTLIKALLAAARTDPSAAVRRSYASTAAQLARFASXSRAAKLLEEAADVFRGADAGDRDSKVLAGTIVREMARHAPDVLSGNAAAVMPLAFLAKTD 226
BLAST of mRNA_M-pyrifera_M_contig107040.1505.1 vs. uniprot
Match: A0A7S4IHA2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IHA2_9EUKA) HSP 1 Score: 101 bits (252), Expect = 1.830e-23 Identity = 49/117 (41.88%), Postives = 74/117 (63.25%), Query Frame = 1 Query: 4 LLAPYVPELMSTFLENRSNVEPETRQYFAQKTDEIGITPEEMENLRVSLSKSSPMSETLDICAERVGPSNVKQVAVMLLHLVRHGVGMPTHVGTANFVARLCRSAGGAFKRYASKLI 354 L+AP+VP L LEN S EP Y QKT+E GIT +++E+ R++ S S+PM++TLDICA + +NV++V L L+ +G+G+PT GTA F+ + R +Y+ +LI Sbjct: 66 LIAPHVPMLSQILLENLSFFEPMEFNYLQQKTEEYGITKDQLESARLAFSNSTPMNDTLDICARHIDANNVREVCSKLFTLISNGIGLPTQAGTAKFLTNITRQHPELISKYSGRLI 182
BLAST of mRNA_M-pyrifera_M_contig107040.1505.1 vs. uniprot
Match: L1JC14_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JC14_GUITC) HSP 1 Score: 105 bits (261), Expect = 1.580e-22 Identity = 60/210 (28.57%), Postives = 113/210 (53.81%), Query Frame = 1 Query: 7 LAPYVPELMSTFLENRSNVEPETRQYFAQKTDEIGITPEEMENLRVSLSKSSPMSETLDICAERVGPSNVKQVAVMLLHLVRHGVGMPTHVGTANFVARLC---RSAGGAFKRYASKLIKPALEHLCSPSSAIRKAYAGTLAAIASIVPSSHTSALLVELRRLYCEKG-ELLHRQATI-VTLQALAHAATVKLKDNNVDCVPLAFLGTCD 621 L P++PEL LE+ S++EP+ Y ++ + E +E R+S S++SPM++TLD+C + ++ L+H+++HGVG+PT G A FV++LC + ++++S+L++ S+ +R+A A A +A + ++ ++ +R++Y +KG + +ATI V L+ L A + +PL +G D Sbjct: 1123 LRPFIPELSLVLLESLSSLEPQMNTYLQLNAEKFDVAGETVERARLSASRNSPMADTLDMCVRYMNGEAAEETIPKLVHVIQHGVGLPTRCGVAKFVSQLCLIQQEVPAVLRKHSSRLLRALCSAFSDRSTVVRQAMASAAARVAGVSKENNIEEFVLNMRKMYVDKGMDDAALRATIGVALKELVLQARDSSSVSMQKVIPLVIVGKED 1332
BLAST of mRNA_M-pyrifera_M_contig107040.1505.1 vs. uniprot
Match: A0A2P6NZG9_9EUKA (Proteasome-associated protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NZG9_9EUKA) HSP 1 Score: 104 bits (260), Expect = 2.160e-22 Identity = 57/165 (34.55%), Postives = 91/165 (55.15%), Query Frame = 1 Query: 1 SLLAPYVPELMSTFLENRSNVEPETRQYFAQKTDEIGITPEEMENLRVSLSKSSPMSETLDICAERVGPSNVKQVAVMLLHLVRHGVGMPTHVGTANFVARLCRSAGGAFKRYASKLIKPALEHLCSPSSAIRKAYAGTLAAIASIVPSSHTSALLVELRRLYCE 495 ++LAP++P L+ LE S +E + Y A T +GI+ E+ E R+S+SK SP++ETLDIC + + N+ +V ++ ++ GVG+PT V TA F+ +L +A K++ L + S IRKAYAG L +A +L +L +LY + Sbjct: 1258 NMLAPHIPNLVGVLLEGLSAMENSSLNYMAFHTQSMGISQEQFEEARISISKFSPLNETLDICIKYIDEKNIGEVVGKIVETIKTGVGLPTKVATAKFIVQLVLQKQELLSPHAGKILNALLGSMREKSPVIRKAYAGALGNVAKFASPKVIKSLTEKLLQLYSD 1422
BLAST of mRNA_M-pyrifera_M_contig107040.1505.1 vs. uniprot
Match: I0YSD2_COCSC (ARM repeat-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YSD2_COCSC) HSP 1 Score: 102 bits (255), Expect = 1.000e-21 Identity = 66/206 (32.04%), Postives = 103/206 (50.00%), Query Frame = 1 Query: 7 LAPYVPELMSTFLENRSNVEPETRQYFAQKTDEIGITPEEMENLRVSLSKSSPMSETLDICAERVGPSNVKQVAVMLLHLVRHGVGMPTHVGTANFVARLCRSAGGAFKRYASKLIKPALEHLCSP-SSAIRKAYAGTLAAIASIVPSSHTSALLVELRRLYCEKGELLHRQATIVTLQALAHAATVKLKDNNVDCVPLAFLGTCD 621 + P + L+ LE+ S +E Y Q + IG+ +ENLRV+ SKSSPMS+TLD+CA ++++ + L L++ GVG+ T VG+A FVA L G + + L+K L + S+A+R++YA A I + + + E LY E G+ RQ + L+ L A + +PLAF+ D Sbjct: 1240 IRPQLARLVPAMLESLSGMEDTRLNYVEQHAERIGLDSGRLENLRVAASKSSPMSDTLDLCARYSDAASLEALVPALCQLLKRGVGVNTRVGSARFVASLATRMGSDIRPHTGTLLKAVLGAARNERSTAVRRSYAQAAATIVKYAAETRAAKFVAEATALYTEPGDREARQLAGLLLRELVRGAPDTFSAHAAAALPLAFVACQD 1445
BLAST of mRNA_M-pyrifera_M_contig107040.1505.1 vs. uniprot
Match: A0A061SLE9_9CHLO (Proteasome component ECM29 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SLE9_9CHLO) HSP 1 Score: 101 bits (251), Expect = 2.450e-21 Identity = 55/143 (38.46%), Postives = 86/143 (60.14%), Query Frame = 1 Query: 7 LAPYVPELMSTFLENRSNVEPETRQYFAQKTDEIGITPEEMENLRVSLSKSSPMSETLDICAERVGPSNVKQVAVMLLHLVRHGVGMPTHVGTANFVARLCRSAGGAFKRYASKLIKPALEHL-CSPSSAIRKAYAGTLAAIA 432 L ++PEL+ LE+ S +E + Y Q + G++ + +E+ RVS SKS+PMS+TLD+CA + P ++ + L+ L++ GVG+ T GTANFVA+L G + + LIK L PS+A+R++YA T A +A Sbjct: 346 LQAHIPELVPAMLESLSQLEDQRLNYLEQHAERYGVSADRLESARVSASKSTPMSDTLDLCARQCRPDTLEGLVPKLVALIKRGVGLNTRCGTANFVAQLSMRHGSDMRPHTGTLIKALLAAARTDPSAAVRRSYASTAAQLA 488
BLAST of mRNA_M-pyrifera_M_contig107040.1505.1 vs. uniprot
Match: UPI0018D9E8D2 (proteasome adapter and scaffold protein ECM29-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9E8D2) HSP 1 Score: 101 bits (251), Expect = 3.450e-21 Identity = 63/203 (31.03%), Postives = 105/203 (51.72%), Query Frame = 1 Query: 1 SLLAPYVPELMSTFLENRSNVEPETRQYFAQKTDEIGITPEEMENLRVSLSKSSPMSETLDICAERVGPSNVKQVAVMLLHLVRHGVGMPTHVGTANFVARLCRSAGGAFKRYASKLIKPALEHLCSPSSAIRKAYAGTLAAIASIVPSSHTSALLVELRRLYCEKGELLHRQATIVTLQALAHAATVKLKDNNVDCVPLAFL 609 S L P++ L++ LE+ S +E + Y + + + E+++N R+++SKSSPM E +++CA+ V + ++ + L+R G+GM T G ++F+ LC YA KL+ L L S A+RK+ A + + +I S L+ L+ Y EK + A VTLQA++ K +N +PLAFL Sbjct: 1336 SRLKPHMAVLVTAQLESLSGLEHQAMNYMSLHVGQNQDSQEKLDNARIAMSKSSPMMEMINMCAQYVDADVLVELVSRICDLIRSGIGMGTKAGCSSFIILLCHQCPLDLSPYAGKLLSAFLTGLNDKSPAVRKSNATAIGHLIAIAKDSSVQKLITRLKTWYTEKDDEALHTACGVTLQAMSRHCPDTFKKHNALAMPLAFL 1538
BLAST of mRNA_M-pyrifera_M_contig107040.1505.1 vs. uniprot
Match: A0A1Y2FE97_9FUNG (ARM repeat-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2FE97_9FUNG) HSP 1 Score: 100 bits (248), Expect = 8.630e-21 Identity = 64/207 (30.92%), Postives = 109/207 (52.66%), Query Frame = 1 Query: 4 LLAPYVPELMSTFLENRSNVEPETRQYFAQKTDEIGITPEEMENLRVSLSKSSPMSETLDICAERVGPSNVKQVAVMLLHLVRHGVGMPTHVGTANFVARLCRSAGGAFKRYASKLIKPALEHLCSPSSAIRKAYAGTLAAIASIVPSSHTSALLVELRRLYCEKGELLHRQATIVTLQALAHAATVKLKDNNVDCV-PLAFLGTCD 621 LL P++ ++S LE+ S++EP+ Y + TD + ++++NLR+S +KSSP+ E ++ C E + +K +A L L+R VG P+ GTA FV L K YA ++K + IRK Y+ ++ +A I S + ++ + Y E + R V L+ +++ A+ ++KDN + V PLA G+CD Sbjct: 1278 LLKPHITNIISILLESLSSLEPQAINYLSFHTD----STQQLDNLRLSATKSSPLIEAVENCIEYIDDDVMKTLAPELCTLIRKSVGFPSKAGTARFVVSLTLRKPLIVKPYADNILKALASTQSDRNMTIRKLYSSSIGYVAHISSYQALSKFIKKVTKQYIENDDEETRSMAAVVLKEISNHASDQIKDNCLKIVLPLAIFGSCD 1480
BLAST of mRNA_M-pyrifera_M_contig107040.1505.1 vs. uniprot
Match: A0A1Y1VKM1_9FUNG (ARM repeat-containing protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VKM1_9FUNG) HSP 1 Score: 99.8 bits (247), Expect = 1.170e-20 Identity = 64/207 (30.92%), Postives = 110/207 (53.14%), Query Frame = 1 Query: 4 LLAPYVPELMSTFLENRSNVEPETRQYFAQKTDEIGITPEEMENLRVSLSKSSPMSETLDICAERVGPSNVKQVAVMLLHLVRHGVGMPTHVGTANFVARLCRSAGGAFKRYASKLIKPALEHLCSPSSAIRKAYAGTLAAIASIVPSSHTSALLVELRRLYCEKGELLHRQATIVTLQALAHAATVKLKDNNVDCV-PLAFLGTCD 621 LL P++ +++S LE+ S++EP+ Y + TD + ++++NLR++ +KSSP+ E ++ C E V +K +A L L++ VG P+ GTA FV + K YA ++K + IRK Y+ ++ IA I S + ++ + Y E E R V L+ +++ A+ ++KDN + V PLA G+CD Sbjct: 1279 LLKPHITDIISILLESLSSLEPQAINYLSFHTD----STQQLDNLRLNATKSSPIIEAVENCIEYVDDEVMKTLAPELCTLIKKSVGFPSKAGTARFVVSITLRKPLIVKPYADNILKALASTQSDRNMTIRKLYSSSIGYIAHITSYQALSKFIKKITKQYVENDEEETRTMAAVVLKEVSNHASDQIKDNCLKIVLPLAIFGSCD 1481
BLAST of mRNA_M-pyrifera_M_contig107040.1505.1 vs. uniprot
Match: A0A6B2KWN2_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KWN2_9EUKA) HSP 1 Score: 97.1 bits (240), Expect = 9.940e-20 Identity = 71/207 (34.30%), Postives = 107/207 (51.69%), Query Frame = 1 Query: 4 LLAPYVPELMSTFLENRSNVEPETRQYFAQKTDEIGITPEEMENLRVSLSKSSPMSETLDICAERVGPSNVKQVAVMLLHLVRHGVGMPTHVGTANFVARLCRSAGGAFKRYASKLIKPALEHLCSPSSAIRKAYAGTLAAIASIVPSSHTSALLVELRRLYC-EKGELLHRQATIVTLQALAHAATVKLKDNNVDCVPLAFLGTCD 621 LL P+V L++T LE +N+EP Y +++GI+ EE E+ R+S+SK SP++ETLD+C ++V N++ + +LL L+ VG+ + VG A F RL K Y KL+ + S S ++R+AYA + +A I S +LL +Y E+ E R L L A KL+ N VPL F+ D Sbjct: 1076 LLKPHVSLLVNTLLEALTNLEPTQFNYLQIHAEKMGIS-EEFESARLSVSKFSPLNETLDLCVDQVDEENIESLVSVLLDLLGGSVGLTSRVGAAQFTIRLSIIKTKFIKPYLKKLLLKLQRSVNSKSPSVRQAYAQCMGYLAKISTSRQVESLLDYFVDIYNKEEQEEGSRVVVGEALLQLIKLAPDKLQPLNTKLVPLVFVARFD 1281 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107040.1505.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107040.1505.1 >prot_M-pyrifera_M_contig107040.1505.1 ID=prot_M-pyrifera_M_contig107040.1505.1|Name=mRNA_M-pyrifera_M_contig107040.1505.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=197bp MSTFLENRSNVEPETRQYFAQKTDEIGITPEEMENLRVSLSKSSPMSETLback to top mRNA from alignment at M-pyrifera_M_contig107040:3..623+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107040.1505.1 ID=mRNA_M-pyrifera_M_contig107040.1505.1|Name=mRNA_M-pyrifera_M_contig107040.1505.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=621bp|location=Sequence derived from alignment at M-pyrifera_M_contig107040:3..623+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107040:3..623+ >mRNA_M-pyrifera_M_contig107040.1505.1 ID=mRNA_M-pyrifera_M_contig107040.1505.1|Name=mRNA_M-pyrifera_M_contig107040.1505.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1182bp|location=Sequence derived from alignment at M-pyrifera_M_contig107040:3..623+ (Macrocystis pyrifera P11B4 male)back to top |