mRNA_M-pyrifera_M_contig10693.1486.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10693.1486.1 vs. uniprot
Match: A0A835YY77_9STRA (Cytochrome c biogenesis protein, thiol reduction transmembrane region, CcdA n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY77_9STRA) HSP 1 Score: 219 bits (559), Expect = 1.560e-69 Identity = 119/169 (70.41%), Postives = 138/169 (81.66%), Query Frame = 1
Query: 61 GLATVLSLLGLSATFAGKVMGSTTAGSELATL-LPLGASAFAVAMGLNVLELVQLDLPSFEGGLDFMTSLPRNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLSYSIGYTTPLMAAGTASGVLSRLMSTNGLNWITPASGALLISYGTYNGLNAMF 564
GLATVLS+LGLSAT+AGK+ GST G + L LPL +S A+A GLN+LEL+ LPS+E G++ SLPR RAY LGASSALVASPCCTPVLASILGF+A+SQDPALGL LLL+YS+GYTTPLMAAGTASG LSR+MS +GL WITP S A LISYGT+ GL A+F
Sbjct: 50 GLATVLSVLGLSATYAGKLFGSTGLGGDTGGLALPLVSSVIAIAAGLNLLELLNFTLPSWEAGVESFNSLPRVGRAYALGASSALVASPCCTPVLASILGFVASSQDPALGLALLLAYSLGYTTPLMAAGTASGALSRIMSASGLTWITPVSAAALISYGTFTGLGAIF 218
BLAST of mRNA_M-pyrifera_M_contig10693.1486.1 vs. uniprot
Match: A0A4D9CLR8_9STRA (DsbD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLR8_9STRA) HSP 1 Score: 172 bits (437), Expect = 4.800e-49 Identity = 99/170 (58.24%), Postives = 127/170 (74.71%), Query Frame = 1
Query: 61 GLATVLSLLGLSATFAGKVMGSTTAGSELATLLPLGASAFAVAMGLNVLELVQLDLPSFEGGLDFMTSLPRNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLSYSIGYTTPLMAAGTASGVLSRLMST--NGLNWITPASGALLISYGTYNGLNAMF 564
GLAT LS+LGLSAT AGK+ GS AG+ L LPL ASA A+ MGLN+L+LV L LPSF+ L + P + +A+LLGA+SAL+ASPC TPVLASILGF+A S +P LG LL SYS+GY+TPL+ AG SG ++ ++ +G +W+TPA+GALLISYGTY+ L +F
Sbjct: 225 GLATSLSVLGLSATLAGKLFGSAGAGA-LGAALPLTASAVAIVMGLNLLDLVSLRLPSFDAALQ-LERFPPSLQAFLLGATSALIASPCSTPVLASILGFVAASGEPYLGAGLLFSYSLGYSTPLLLAGLLSGTVTSFIAKRGDGFSWVTPATGALLISYGTYSSLATLF 392
BLAST of mRNA_M-pyrifera_M_contig10693.1486.1 vs. uniprot
Match: A0A7S2UUE9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUE9_9STRA) HSP 1 Score: 162 bits (411), Expect = 5.270e-45 Identity = 97/175 (55.43%), Postives = 124/175 (70.86%), Query Frame = 1
Query: 61 GLATVLSLLGLSATFAGKVMGSTTAGSELATLLPLGASAFAVAMGLNVLELVQLDLPSFEGGLD-------FMTSLPRNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLSYSIGYTTPLMAAGTASGVLSRLMSTNGLNWITPASGALLISYGTYNGLNAMF 564
GLA+ L+ LG++AT AGKV G T G + + LP+ A A AV MGL++L+L+ L LPS GG+D + LPR RA+ LGASSAL+++PC TPVLA+ILGF+ATS DP LG LLL+Y+ GYTTPLM AG ASG S MS+ GL W+TP +GA+LI YG + LNA+F
Sbjct: 240 GLASSLAALGVTATMAGKVYGQTL-GPQNGSTLPVLAGALAVVMGLSLLDLLSLPLPS-AGGMDGSSADEGLLDRLPRPLRAFGLGASSALISTPCSTPVLAAILGFVATSADPLLGGGLLLAYTAGYTTPLMIAGVASGKASEAMSSKGLTWVTPLTGAILIFYGINSVLNALF 412
BLAST of mRNA_M-pyrifera_M_contig10693.1486.1 vs. uniprot
Match: A0A0G4H6S3_VITBC (DsbD domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H6S3_VITBC) HSP 1 Score: 153 bits (387), Expect = 1.270e-42 Identity = 91/194 (46.91%), Postives = 130/194 (67.01%), Query Frame = 1
Query: 1 NRPPPTPPPHSSYWGMSQPQGLATVLSLLGLSATFAGK-VMGSTTAGSELATLLPLGASAFAVAMGLNVLELVQLDLPSFEGG-LDFMTSLPRNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLSYSIGYTTPLMAAGTASGVLSRLMSTN----GLNWITPASGALLISYGTYNGLNAMF 564
+RPPP P S + GLAT LS LGL A+ G + G T+ +E ++P+ AS AV MGLNVL LV + P+F+GG LD LP+ + +L G +SAL+A+PC TPVL ++LG++A++ DP LG LL +Y++GY +P++AAGTASG L++L++ GL WITP +G LL+ YGT++ LNA+F
Sbjct: 108 SRPPPIPLSSSLMFAA----GLATALSSLGLGASLLGMGLFGQTSGPAE--RIVPVAASVLAVVMGLNVLNLVSISFPAFDGGELDEGRKLPKALQDFLFGVTSALIATPCSTPVLTALLGYVASTGDPLLGAALLFAYTLGYASPVVAAGTASGRLAQLLTQGEGREGLRWITPVTGGLLVGYGTFSTLNALF 295
BLAST of mRNA_M-pyrifera_M_contig10693.1486.1 vs. uniprot
Match: A0A067G6J2_CITSI (DsbD domain-containing protein n=6 Tax=Sapindales TaxID=41937 RepID=A0A067G6J2_CITSI) HSP 1 Score: 143 bits (361), Expect = 6.080e-39 Identity = 83/172 (48.26%), Postives = 112/172 (65.12%), Query Frame = 1
Query: 61 GLATVLSLLGLSATFAGKVMGSTTAGSELATLLPLGASAFAVAMGLNVLELVQLDLPSFEGGLD---FMTSLPRNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLSYSIGYTTPLMAAGTASGVLSRLMSTNGLN-WITPASGALLISYGTYNGLNAMF 564
GLAT L+LLG+ A+FAGK G ++ T LPL AS A+ MGLN+LE+++L LPSF D + P + +AYL G + AL ASPC TPVLA++LG++ATS+DP +G LLLSY+ GY PL+ A + +G L L+S + WI P SGALL+ G Y L+ +F
Sbjct: 106 GLATTLALLGVGASFAGKAYG------QIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLF 271
BLAST of mRNA_M-pyrifera_M_contig10693.1486.1 vs. uniprot
Match: UPI0019F72B38 (Sulfite exporter TauE/SafE family protein n=1 Tax=Synechococcales cyanobacterium C42_A2020_086 TaxID=2774344 RepID=UPI0019F72B38) HSP 1 Score: 142 bits (358), Expect = 7.870e-39 Identity = 84/170 (49.41%), Postives = 116/170 (68.24%), Query Frame = 1
Query: 61 GLATVLSLLGLSATFAGKVMGSTTAGSELATLLPLGASAFAVAMGLNVLELVQLDLPSFEGGLDFM-TSLPRNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLSYSIGYTTPLMAAGTASGVLSRLMSTNGLN-WITPASGALLISYGTYNGLNAMF 564
GLAT L+ LG++AT GKV G G LP+ SA A+ MGLN+LE+V L LPS+ GG+D++ T LP R+Y +G + LVASPC TPVLA++L +++T+QDP LG VLLL+Y+ GY PL+ AGT + + +L+ + WITPASGALLI +G ++ L +F
Sbjct: 80 GLATTLAALGIAATVVGKVYGQVGLG------LPIVVSAIAILMGLNLLEIVPLRLPSW-GGMDWISTDLPEGVRSYFIGLTFGLVASPCSTPVLATLLAWVSTTQDPLLGSVLLLAYTAGYVAPLILAGTFTASIKKLLELRRWSGWITPASGALLIGFGVFSLLFRLF 242
BLAST of mRNA_M-pyrifera_M_contig10693.1486.1 vs. uniprot
Match: A0A0D2U2J8_GOSRA (DsbD domain-containing protein n=20 Tax=Malvaceae TaxID=3629 RepID=A0A0D2U2J8_GOSRA) HSP 1 Score: 144 bits (362), Expect = 2.260e-38 Identity = 85/174 (48.85%), Postives = 113/174 (64.94%), Query Frame = 1
Query: 61 GLATVLSLLGLSATFAGKVMGSTTAGSELATLLPLGASAFAVAMGLNVLELVQLDLPSFEGGLDFMTS---LPRNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLSYSIGYTTPLMAAGTASGVLSRLMSTNGLN-WITPASGALLISYGTYNGLNAMFGA 570
GLAT L+LLG+ A+FAGK G ++ LPL AS AV MGLN+LE+++L LPSF D T+ LP +AYL G + AL ASPC TPVLA++LG++ATS+DP +G LLL+Y+ GY PL+ A + +G L L+S + WI P SGALL+ G Y L+ +F A
Sbjct: 176 GLATTLALLGIGASFAGKAYG------QIGQGLPLAASGLAVIMGLNLLEVIELQLPSFFSNFDPRTAAANLPSGVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVAPLLLAASFAGALQNLLSFRKFSAWINPVSGALLLGGGVYTFLDRLFPA 343
BLAST of mRNA_M-pyrifera_M_contig10693.1486.1 vs. uniprot
Match: A0A067GFW3_CITSI (DsbD domain-containing protein n=7 Tax=Citrus TaxID=2706 RepID=A0A067GFW3_CITSI) HSP 1 Score: 143 bits (361), Expect = 2.730e-38 Identity = 83/172 (48.26%), Postives = 112/172 (65.12%), Query Frame = 1
Query: 61 GLATVLSLLGLSATFAGKVMGSTTAGSELATLLPLGASAFAVAMGLNVLELVQLDLPSFEGGLD---FMTSLPRNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLSYSIGYTTPLMAAGTASGVLSRLMSTNGLN-WITPASGALLISYGTYNGLNAMF 564
GLAT L+LLG+ A+FAGK G ++ T LPL AS A+ MGLN+LE+++L LPSF D + P + +AYL G + AL ASPC TPVLA++LG++ATS+DP +G LLLSY+ GY PL+ A + +G L L+S + WI P SGALL+ G Y L+ +F
Sbjct: 170 GLATTLALLGVGASFAGKAYG------QIGTGLPLAASGLAIVMGLNLLEIIELQLPSFFDNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPLIGGTLLLSYTTGYVAPLLLAASFAGALQSLLSFRKFSSWINPMSGALLLGGGLYTFLDRLF 335
BLAST of mRNA_M-pyrifera_M_contig10693.1486.1 vs. uniprot
Match: A0A061FE90_THECC (Cytochrome c-type biogenesis ccda chloroplastic protein isoform 2 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061FE90_THECC) HSP 1 Score: 140 bits (354), Expect = 4.870e-38 Identity = 83/174 (47.70%), Postives = 111/174 (63.79%), Query Frame = 1
Query: 61 GLATVLSLLGLSATFAGKVMGSTTAGSELATLLPLGASAFAVAMGLNVLELVQLDLPSFEGGLD---FMTSLPRNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLSYSIGYTTPLMAAGTASGVLSRLMSTNGLN-WITPASGALLISYGTYNGLNAMFGA 570
GLAT L+LLG+ A+FAGK G ++ LPL AS AV MGLN+LE+++L LPSF D + P +AYL G + AL ASPC TPVLA++LG++ATS+DP +G LLL+Y+ GY PL+ A + +G L L+S + WI P SGALL+ G Y L+ +F A
Sbjct: 93 GLATTLALLGIGASFAGKAYG------QIGQGLPLAASGLAVIMGLNLLEVIELQLPSFFNNFDPRAAAANFPSGVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSLLLTYTTGYVAPLLLAASFAGALQSLLSLRKFSAWINPVSGALLLGGGVYTFLDRLFPA 260
BLAST of mRNA_M-pyrifera_M_contig10693.1486.1 vs. uniprot
Match: A0A2R6WGN2_MARPO (DsbD domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WGN2_MARPO) HSP 1 Score: 142 bits (358), Expect = 4.990e-38 Identity = 84/172 (48.84%), Postives = 112/172 (65.12%), Query Frame = 1
Query: 61 GLATVLSLLGLSATFAGKVMGSTTAGSELATLLPLGASAFAVAMGLNVLELVQLDLPSFEGGLD---FMTSLPRNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLSYSIGYTTPLMAAGTASGVLSRLMSTNGLN-WITPASGALLISYGTYNGLNAMF 564
GLAT L+LLG++A+ AGK G G LP+ S A+ MGLN+LE+++L LPSF G D +LP + +AYL G + AL ASPC TPVLAS+LG++ATSQDP +G LLL+Y+ GY PL+AA + +G + +LMS + WI P SGALL+ G Y L +F
Sbjct: 147 GLATTLALLGVAASLAGKAYGQVGQG------LPVAVSCVAMVMGLNLLEIIELQLPSFFGDFDPKAAAANLPTSVQAYLAGLTFALAASPCSTPVLASLLGYVATSQDPVIGGSLLLAYTCGYVAPLLAAASLAGAIQQLMSLRKYSAWINPTSGALLLGGGLYTFLVRVF 312 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10693.1486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10693.1486.1 >prot_M-pyrifera_M_contig10693.1486.1 ID=prot_M-pyrifera_M_contig10693.1486.1|Name=mRNA_M-pyrifera_M_contig10693.1486.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp NRPPPTPPPHSSYWGMSQPQGLATVLSLLGLSATFAGKVMGSTTAGSELAback to top mRNA from alignment at M-pyrifera_M_contig10693:6957..7917- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10693.1486.1 ID=mRNA_M-pyrifera_M_contig10693.1486.1|Name=mRNA_M-pyrifera_M_contig10693.1486.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=961bp|location=Sequence derived from alignment at M-pyrifera_M_contig10693:6957..7917- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10693:6957..7917- >mRNA_M-pyrifera_M_contig10693.1486.1 ID=mRNA_M-pyrifera_M_contig10693.1486.1|Name=mRNA_M-pyrifera_M_contig10693.1486.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1146bp|location=Sequence derived from alignment at M-pyrifera_M_contig10693:6957..7917- (Macrocystis pyrifera P11B4 male)back to top |