mRNA_M-pyrifera_M_contig106640.1434.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig106640.1434.1
Unique NamemRNA_M-pyrifera_M_contig106640.1434.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig106640.1434.1 vs. uniprot
Match: Q387R7_TRYB2 (Class 3 lipase, putative n=3 Tax=Trypanosoma brucei TaxID=5691 RepID=Q387R7_TRYB2)

HSP 1 Score: 88.2 bits (217), Expect = 7.010e-18
Identity = 52/123 (42.28%), Postives = 71/123 (57.72%), Query Frame = 1
Query:    7 RYHPGFFERA-SLFPSTG--LAEKVAAGAELFFVGHSLGGAVASVVTIEMLGRHPSIARERVRCITAGSPLVGDSGIRKRCEQLGITGNLFHMVEPGDAVPRLLSFIGAAKNFANGCSGKLRG 366
            R H GF   A +L P     + E +  G  L F GHSLGGAVA++V +++L  HP +AR+RVRC T G+PLVGD  + +  ++ G+T N  H+V   D VPRLL        +  GC  +L G
Sbjct:  317 RVHAGFIREAENLVPQMEEFVGEAIHHGYRLVFSGHSLGGAVATLVALQLLQTHPDLARDRVRCFTFGAPLVGDRQLTELVQRFGLTPNFHHIVHQLDIVPRLL----CTYEWLRGCVDELAG 435          
BLAST of mRNA_M-pyrifera_M_contig106640.1434.1 vs. uniprot
Match: A0A8B7DAN2_HYDVU (uncharacterized protein LOC101241641 isoform X1 n=5 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7DAN2_HYDVU)

HSP 1 Score: 73.2 bits (178), Expect = 1.370e-12
Identity = 44/114 (38.60%), Postives = 62/114 (54.39%), Query Frame = 1
Query:    1 TGRYHPGFFERASLFP-STGLAEKVAAGAELFFVGHSLGGAVASVVTIEMLGRHP--------SIARERVRCITAGSPLVGDSGIRKRCEQLGITGNLFHMVEPGDAVPRLLSF 315
            TG++H GF  RA  FP    L  K  A     F GHS+GGAVA++V I  +            S    ++ C T G+PLVGD  +++ C++ GI+  L+H V   D +PRLLS+
Sbjct:  179 TGKFHAGFLNRAKKFPLQKVLNNKDFAEKSFVFCGHSMGGAVATIVAIFAIVEEEKKRKATGKSDKNRQITCFTFGAPLVGDLKLKQFCDENGISKYLYHSVNFMDPIPRLLSY 292          
BLAST of mRNA_M-pyrifera_M_contig106640.1434.1 vs. uniprot
Match: A0A176VWQ2_MARPO (Lipase_3 domain-containing protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176VWQ2_MARPO)

HSP 1 Score: 68.6 bits (166), Expect = 5.370e-11
Identity = 46/124 (37.10%), Postives = 62/124 (50.00%), Query Frame = 1
Query:    4 GRYHPGFFERASLFPSTGLAEKVAAGAELFFVGHSLGGAVASVVTIEML-GRHPSIARERVRCITAGSPLVGDSGIRKRCEQLGITGNLFHMVEPGDAVPRLLSFIGAAKNFANGCSGKLRGAV 372
            G  H GF ERA   P     + + AG E+ F GHSLGGAVAS++T+ +L   +     E+VRCIT GSPL   S + +            H+V   D VP++L F+ A +         L G V
Sbjct:  105 GAAHWGFAERAESVPIDFFRKLLDAGEEIIFTGHSLGGAVASLLTLRVLESSNERSVDEQVRCITFGSPLFASSRLAEMINDK-YKDIFIHIVSRRDCVPKILPFVSALQKLVYSDEDHLEGLV 227          
BLAST of mRNA_M-pyrifera_M_contig106640.1434.1 vs. uniprot
Match: C3ZTR0_BRAFL (sn-1-specific diacylglycerol lipase n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZTR0_BRAFL)

HSP 1 Score: 67.0 bits (162), Expect = 1.970e-10
Identity = 43/107 (40.19%), Postives = 57/107 (53.27%), Query Frame = 1
Query:    4 GRYHPGFFERASLFPSTGLAEKVAAG---AELFFVGHSLGGAVASVVTIEMLGRHPSIAR--ERVRCITAGSPLVGDSGIRKRCEQLGITGNLFHMVEPGDAVPRLL 309
            G+ H GF + AS FP   +  K   G   A +   GHS+GGAVA +VT+ ML      AR  E+V  I  G+P  GD  +R   E+  ++ NL  +V   D VPRLL
Sbjct:  210 GKCHAGFLKLASCFPVDPILRKYVYGDNCARIVVCGHSMGGAVAHIVTLTMLADLKRCARDTEKVLSIAIGAPFFGDIEMRNYAEKHDLSDNLLTIVNQNDPVPRLL 316          
BLAST of mRNA_M-pyrifera_M_contig106640.1434.1 vs. uniprot
Match: F9W5Q2_TRYCI (WGS project CAEQ00000000 data, annotated contig 1358 n=1 Tax=Trypanosoma congolense (strain IL3000) TaxID=1068625 RepID=F9W5Q2_TRYCI)

HSP 1 Score: 66.6 bits (161), Expect = 2.550e-10
Identity = 31/77 (40.26%), Postives = 49/77 (63.64%), Query Frame = 1
Query:   79 GAELFFVGHSLGGAVASVVTIEMLGRHPSIARERVRCITAGSPLVGDSGIRKRCEQLGITGNLFHMVEPGDAVPRLL 309
            G  L   GHSLGGAVA++VT+ +L  +P +   +++C T G+PLVGD  + K  ++ G++    H+V   D +P+LL
Sbjct:  399 GYRLVLSGHSLGGAVAALVTLRLLHTNPDLPEHKLKCFTFGAPLVGDDQLTKLVKEFGLSTRFQHVVHLCDIIPQLL 475          
BLAST of mRNA_M-pyrifera_M_contig106640.1434.1 vs. uniprot
Match: A0A1X0P712_9TRYP (Putative class 3 lipase n=1 Tax=Trypanosoma theileri TaxID=67003 RepID=A0A1X0P712_9TRYP)

HSP 1 Score: 65.9 bits (159), Expect = 4.730e-10
Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 1
Query:   79 GAELFFVGHSLGGAVASVVTIEMLGRHPSIARERVRCITAGSPLVGDSGIRKRCEQLGITGNLFHMVEPGDAVPRL 306
            G  L   GHSLGGAVA +V + +L  +P + + ++RC++ GSPLVG+  + +  EQ G   N  H+V   D +PR+
Sbjct:  393 GYRLVISGHSLGGAVAQIVALRLLMENPQLFKNKLRCVSFGSPLVGNYQLAQFVEQNGWKSNFHHIVYRSDVIPRI 468          
BLAST of mRNA_M-pyrifera_M_contig106640.1434.1 vs. uniprot
Match: C3YXR3_BRAFL (sn-1-specific diacylglycerol lipase (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YXR3_BRAFL)

HSP 1 Score: 65.5 bits (158), Expect = 6.940e-10
Identity = 42/110 (38.18%), Postives = 57/110 (51.82%), Query Frame = 1
Query:    4 GRYHPGFFERASLFPSTGLAEKVAAG------AELFFVGHSLGGAVASVVTIEMLGRHPSIAR--ERVRCITAGSPLVGDSGIRKRCEQLGITGNLFHMVEPGDAVPRLL 309
            G+ H GF + AS FP   +  K   G      A +   GHS+GGAVA +VT+ ML      +R  E+V  I  G+P  GD  +R   E+  ++ NL  +V   D VPRLL
Sbjct:  197 GKCHAGFLQLASCFPVDPILRKYVYGKDGDNCARIVVCGHSMGGAVAHIVTLNMLADLKRCSRDTEKVLSIAVGAPYFGDREMRDYAEKHDLSDNLLTIVNQNDPVPRLL 306          
BLAST of mRNA_M-pyrifera_M_contig106640.1434.1 vs. uniprot
Match: A0A8J1UVL6_OWEFU (Ofus.G20388 protein n=2 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UVL6_OWEFU)

HSP 1 Score: 63.5 bits (153), Expect = 3.190e-9
Identity = 39/118 (33.05%), Postives = 61/118 (51.69%), Query Frame = 1
Query:    4 GRYHPGFFERASLFPSTGLAEKVAAGAELFFVGHSLGGAVASVVTIEMLGRHP--SIARERVRCITAGSPLVGDSGIRKRCEQLGITGNLFHMVEPGDAVPRLLSFIGAAKNFANGCS 351
            GR H GF+E A + P   + +K   G  +   GHS+GGAVA +V +EML +     I      CI+ G+PLV   G+ +  ++  +     +++  GD VPRLL    + +  A+  S
Sbjct:  142 GRLHAGFYEIAEMIPVETILQKYR-GYRIVICGHSMGGAVAQIVALEMLVQMDIKQIKDTTTCCISFGAPLVATKGVTEFVDKHEMASKFVNVINQGDPVPRLLMLSQSLQQVASSSS 258          
BLAST of mRNA_M-pyrifera_M_contig106640.1434.1 vs. uniprot
Match: UPI0004F431A2 (putative class 3 lipase n=1 Tax=Trypanosoma grayi TaxID=71804 RepID=UPI0004F431A2)

HSP 1 Score: 63.2 bits (152), Expect = 3.900e-9
Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 1
Query:   79 GAELFFVGHSLGGAVASVVTIEMLGRHPSIARERVRCITAGSPLVGDSGIRKRCEQLGITGNLFHMVEPGDAVPRL 306
            G  L   GHSLGGAVA +VT  ML  H  + ++++ CIT G+PLVG+  + +R E+ G      H+V   D VPRL
Sbjct:  215 GYRLVCTGHSLGGAVAQLVTFRMLCSHTEL-KDKLTCITFGTPLVGNYQLAQRVERCGWRSKFHHVVYRSDVVPRL 289          
BLAST of mRNA_M-pyrifera_M_contig106640.1434.1 vs. uniprot
Match: A0A6P5ABC2_BRABE (sn-1-specific diacylglycerol lipase n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5ABC2_BRABE)

HSP 1 Score: 62.8 bits (151), Expect = 6.090e-9
Identity = 41/110 (37.27%), Postives = 56/110 (50.91%), Query Frame = 1
Query:    4 GRYHPGFFERASLFPSTGLAEKVAAG------AELFFVGHSLGGAVASVVTIEMLGRHPSIARE--RVRCITAGSPLVGDSGIRKRCEQLGITGNLFHMVEPGDAVPRLL 309
            G+ H GF + AS FP   +  K          A +   GHS+GGAVA +VT+ ML       R+  +V  I  G+P  GD  +RK  E+  ++ NL  +V   D VPRLL
Sbjct:  105 GKCHAGFLKLASCFPVDPILRKYVYSRGADDCARIVVCGHSMGGAVAHIVTLNMLADLTRCGRDTNKVVSIAIGAPFFGDREMRKYAEKHELSDNLLTIVNQNDPVPRLL 214          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106640.1434.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q387R7_TRYB27.010e-1842.28Class 3 lipase, putative n=3 Tax=Trypanosoma bruce... [more]
A0A8B7DAN2_HYDVU1.370e-1238.60uncharacterized protein LOC101241641 isoform X1 n=... [more]
A0A176VWQ2_MARPO5.370e-1137.10Lipase_3 domain-containing protein n=1 Tax=Marchan... [more]
C3ZTR0_BRAFL1.970e-1040.19sn-1-specific diacylglycerol lipase n=1 Tax=Branch... [more]
F9W5Q2_TRYCI2.550e-1040.26WGS project CAEQ00000000 data, annotated contig 13... [more]
A0A1X0P712_9TRYP4.730e-1040.79Putative class 3 lipase n=1 Tax=Trypanosoma theile... [more]
C3YXR3_BRAFL6.940e-1038.18sn-1-specific diacylglycerol lipase (Fragment) n=1... [more]
A0A8J1UVL6_OWEFU3.190e-933.05Ofus.G20388 protein n=2 Tax=Owenia fusiformis TaxI... [more]
UPI0004F431A23.900e-944.74putative class 3 lipase n=1 Tax=Trypanosoma grayi ... [more]
A0A6P5ABC2_BRABE6.090e-937.27sn-1-specific diacylglycerol lipase n=1 Tax=Branch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig106640contigM-pyrifera_M_contig106640:8..379 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score90.5
Seed ortholog evalue5.9e-16
Seed eggNOG ortholog5691.EAN78955
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Class 3 lipase
EggNOG OGs29QST@1,2RX99@2759,3XSSU@5653
COG Functional cat.G
Best tax levelKinetoplastida
Best eggNOG OGNA|NA|NA
Exons1
Model size372
Cds size372
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815576.5721886-CDS-M-pyrifera_M_contig106640:7..3791622815576.5721886-CDS-M-pyrifera_M_contig106640:7..379Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig106640 8..379 +
1692277471.394862-CDS-M-pyrifera_M_contig106640:7..3791692277471.394862-CDS-M-pyrifera_M_contig106640:7..379Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig106640 8..379 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig106640.1434.1prot_M-pyrifera_M_contig106640.1434.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig106640 8..379 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig106640.1434.1

>prot_M-pyrifera_M_contig106640.1434.1 ID=prot_M-pyrifera_M_contig106640.1434.1|Name=mRNA_M-pyrifera_M_contig106640.1434.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp
TGRYHPGFFERASLFPSTGLAEKVAAGAELFFVGHSLGGAVASVVTIEML
GRHPSIARERVRCITAGSPLVGDSGIRKRCEQLGITGNLFHMVEPGDAVP
RLLSFIGAAKNFANGCSGKLRGAV
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mRNA from alignment at M-pyrifera_M_contig106640:8..379+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig106640.1434.1 ID=mRNA_M-pyrifera_M_contig106640.1434.1|Name=mRNA_M-pyrifera_M_contig106640.1434.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=372bp|location=Sequence derived from alignment at M-pyrifera_M_contig106640:8..379+ (Macrocystis pyrifera P11B4 male)
ACCGGCAGATACCACCCCGGCTTCTTTGAGAGAGCATCTCTGTTTCCCTC GACGGGCCTAGCTGAGAAGGTGGCTGCTGGTGCTGAGCTCTTTTTTGTGG GCCACAGCCTGGGAGGTGCTGTTGCCTCTGTGGTGACCATCGAGATGCTG GGCCGTCACCCCAGCATTGCTCGTGAGCGCGTGCGGTGCATCACCGCAGG CTCTCCTTTGGTGGGAGACTCGGGCATTCGCAAGCGCTGTGAGCAGCTTG GCATCACTGGCAACCTGTTCCACATGGTGGAGCCTGGTGACGCGGTACCT CGCTTGCTCTCTTTCATTGGAGCCGCGAAGAACTTTGCCAATGGATGCAG TGGGAAACTGCGAGGAGCTGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig106640:8..379+

>mRNA_M-pyrifera_M_contig106640.1434.1 ID=mRNA_M-pyrifera_M_contig106640.1434.1|Name=mRNA_M-pyrifera_M_contig106640.1434.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=744bp|location=Sequence derived from alignment at M-pyrifera_M_contig106640:8..379+ (Macrocystis pyrifera P11B4 male)
ACCGGCAGATACCACCCCGGCTTCTTTGAGAGAGCATCTCTGTTTCCCTC
GACGGGCCTAGCTGAGAAGGTGGCTGCTGGTGCTGAGCTCTTTTTTGTGG
GCCACAGCCTGGGAGGTGCTGTTGCCTCTGTGGTGACCATCGAGATGCTG
GGCCGTCACCCCAGCATTGCTCGTGAGCGCGTGCGGTGCATCACCGCAGG
CTCTCCTTTGGTGGGAGACTCGGGCATTCGCAAGCGCTGTGAGCAGCTTG
GCATCACTGGCAACCTGTTCCACATGGTGGAGCCTGGTGACGCGGTACCT
CGCTTGCTCTCTTTCATTGGAGCCGCGAAGAACTTTGCCAATGGATGCAG
TGGGAAACTGCGAGGAGCTGTGACCGGCAGATACCACCCCGGCTTCTTTG
AGAGAGCATCTCTGTTTCCCTCGACGGGCCTAGCTGAGAAGGTGGCTGCT
GGTGCTGAGCTCTTTTTTGTGGGCCACAGCCTGGGAGGTGCTGTTGCCTC
TGTGGTGACCATCGAGATGCTGGGCCGTCACCCCAGCATTGCTCGTGAGC
GCGTGCGGTGCATCACCGCAGGCTCTCCTTTGGTGGGAGACTCGGGCATT
CGCAAGCGCTGTGAGCAGCTTGGCATCACTGGCAACCTGTTCCACATGGT
GGAGCCTGGTGACGCGGTACCTCGCTTGCTCTCTTTCATTGGAGCCGCGA
AGAACTTTGCCAATGGATGCAGTGGGAAACTGCGAGGAGCTGTG
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