mRNA_M-pyrifera_M_contig106550.1419.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106550.1419.1 vs. uniprot
Match: A0A3D5DGJ0_9GAMM (LLM class flavin-dependent oxidoreductase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DGJ0_9GAMM) HSP 1 Score: 269 bits (688), Expect = 6.670e-87 Identity = 136/207 (65.70%), Postives = 157/207 (75.85%), Query Frame = 1 Query: 1 SDVYREEMELATRADELGFDLIGIVEHHFEDYSFCPDNFVYLANLAARTKNAKLMTGAVIIPWNDPLRVAEKAALLDELSGGRLILGLGRGLSRREYDRFGINMDESRERFDEATPMILAALETGTMAAHDGKYYHQPEAPIRPVPTRSFKGRINQVAMSGDSVIEAAVHGAKMMQFSYKPMSVHKEEIDTYAAEYRRRHNAAPPVP 621 S VYREE+ LA++ + G+D VEHHFEDYSFCPDN VYL++LAA TK KL TGAVI+PWN PLRVAE+ ALLDELS GR+I G+GRGLSRREYD+FGI+MD SRERFDEA PMI+ ALETG + DGK+Y QP A IRP P RSFKGRI VAMS DS +EAAVHGA+MM F+ K M H E + Y YR+ H A PP P Sbjct: 21 SQVYREELRLASQIEAQGYDSHWCVEHHFEDYSFCPDNIVYLSHLAAVTKTLKLATGAVIVPWNTPLRVAERIALLDELSDGRVIFGMGRGLSRREYDQFGIDMDTSRERFDEAVPMIIKALETGFIEG-DGKFYKQPLAKIRPAPVRSFKGRITSVAMSPDSALEAAVHGAQMMVFTQKSMEDHNAEFEPYRELYRKLHAAPPPPP 226
BLAST of mRNA_M-pyrifera_M_contig106550.1419.1 vs. uniprot
Match: A0A3D5DBE4_9GAMM (LLM class flavin-dependent oxidoreductase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DBE4_9GAMM) HSP 1 Score: 268 bits (684), Expect = 2.950e-86 Identity = 133/204 (65.20%), Postives = 159/204 (77.94%), Query Frame = 1 Query: 4 DVYREEMELATRADELGFDLIGIVEHHFEDYSFCPDNFVYLANLAARTKNAKLMTGAVIIPWN-DPLRVAEKAALLDELSGGRLILGLGRGLSRREYDRFGINMDESRERFDEATPMILAALETGTMAAHDGKYYHQPEAPIRPVPTRSFKGRINQVAMSGDSVIEAAVHGAKMMQFSYKPMSVHKEEIDTYAAEYRRRHNAAP 612 +VY EE++L ADE GFD +VEHHFEDYS CPDNFVYLA LAA+TK KL TGAVI+PWN PLR+AEKAALLD++SGGR ILGLGRGLSRRE+++FG++MDESRERFDEA PMIL ALETG M H GKY+ QP A IRP P +SF GR+ Q+AMS +S EAA HGA++M F+Y P+ K E + YAA +R+ HN P Sbjct: 21 EVYDEELKLVMAADEYGFDSTWVVEHHFEDYSMCPDNFVYLAYLAAKTKRIKLATGAVIVPWNTQPLRIAEKAALLDQISGGRAILGLGRGLSRREFNQFGVDMDESRERFDEAVPMILEALETGVMEEHHGKYFDQPRAVIRPRP-KSFDGRVAQIAMSPESGQEAAKHGARLMAFNYIPIEQQKAEYEAYAATFRKNHNKEP 223
BLAST of mRNA_M-pyrifera_M_contig106550.1419.1 vs. uniprot
Match: A0A2S6NAA4_RHOGL (Bac_luciferase domain-containing protein n=1 Tax=Rhodopila globiformis TaxID=1071 RepID=A0A2S6NAA4_RHOGL) HSP 1 Score: 262 bits (669), Expect = 5.980e-84 Identity = 129/206 (62.62%), Postives = 158/206 (76.70%), Query Frame = 1 Query: 7 VYREEMELATRADELGFDLIGIVEHHFEDYSFCPDNFVYLANLAARTKNAKLMTGAVIIPWN-DPLRVAEKAALLDELSGGRLILGLGRGLSRREYDRFGINMDESRERFDEATPMILAALETGTMAAHDGKYYHQPEAPIRPVPTRSFKGRINQVAMSGDSVIEAAVHGAKMMQFSYKPMSVHKEEIDTYAAEYRRRHNAAPPVP 621 +Y EE+ A ADELG++ + +VEHHFEDYSFCPDNFVYLAN+AARTK +L TGAVI+PWN PLRVAEKAALLD LS GRLILGLGRGLSRRE+ +FG+ M+ESRERFDE PMIL ALETG M H G+++ QP AP++P P +SF+ R QVAMS DS+ AA G +MM F YKP VH+ E D+Y A +++++ AP P Sbjct: 22 IYDEEVRQAVLADELGYEHVWVVEHHFEDYSFCPDNFVYLANIAARTKQIRLATGAVILPWNIQPLRVAEKAALLDTLSEGRLILGLGRGLSRREFGQFGVAMEESRERFDEMAPMILDALETGVMEEHHGRFFDQPRAPLQPRPFKSFRDRTAQVAMSSDSIDVAARLGVQMMSFFYKPNEVHRAEFDSYRATFQKQYGKAPKPP 227
BLAST of mRNA_M-pyrifera_M_contig106550.1419.1 vs. uniprot
Match: A0A1Z9UJY2_9GAMM (Bac_luciferase domain-containing protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UJY2_9GAMM) HSP 1 Score: 260 bits (664), Expect = 3.210e-83 Identity = 127/204 (62.25%), Postives = 159/204 (77.94%), Query Frame = 1 Query: 4 DVYREEMELATRADELGFDLIGIVEHHFEDYSFCPDNFVYLANLAARTKNAKLMTGAVIIPWN-DPLRVAEKAALLDELSGGRLILGLGRGLSRREYDRFGINMDESRERFDEATPMILAALETGTMAAHDGKYYHQPEAPIRPVPTRSFKGRINQVAMSGDSVIEAAVHGAKMMQFSYKPMSVHKEEIDTYAAEYRRRHNAAP 612 +VY+EE++++ A++LGFD I +VEHHFEDYSFCPDNFVYL+ +A +TK KL TGA I+PWN PLRVAEKAALLD+LSGGR ILGLGRGLS +E+++FG+ MDESRERFDEA P+I+ ALE G M H GK+++QP+A IRP PT SFK R+ QVAMS +S EAA+ GA+MM F+YKPM V K E + Y + H AP Sbjct: 21 EVYQEEVQMSLAAEDLGFDHIWVVEHHFEDYSFCPDNFVYLSYIAGQTKRIKLATGACIVPWNIQPLRVAEKAALLDQLSGGRAILGLGRGLSLKEFEQFGVPMDESRERFDEAAPLIVDALEKGEMGPHXGKFFNQPKAVIRPXPTESFKXRLVQVAMSPESGQEAALLGAQMMAFNYKPMEVQKAEYEEYGKAFMEHHGRAP 224
BLAST of mRNA_M-pyrifera_M_contig106550.1419.1 vs. uniprot
Match: A0A353LQV1_9PROT (LLM class flavin-dependent oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LQV1_9PROT) HSP 1 Score: 251 bits (642), Expect = 6.180e-80 Identity = 130/205 (63.41%), Postives = 152/205 (74.15%), Query Frame = 1 Query: 7 VYREEMELATRADELGFDLIGIVEHHFEDYSFCPDNFVYLANLAARTKNAKLMTGAVIIPWNDPLRVAEKAALLDELSGGRLILGLGRGLSRREYDRFGINMDESRERFDEATPMILAALETGTMAAHDGKYYHQPEAPIRPVPTRSFKGRINQVAMSGDSVIEAAVHGAKMMQFSYKPMSVHKEEIDTYAAEYRRRHNAAPPVP 621 VY+EE+ELA A+ELGFD + VEHHF DYSFCPDN V+LAN+AARTK L TGAVI+PWNDPLRVAEK ALLDELS GR + G+GRGL+RREY FGI+M+ESRERFDEA+ MI+AALETG + DG +Y QP PIRP PTRSFKGR V+MS DSV+ AA GA+ + FS +K ID Y EY + H PP P Sbjct: 23 VYQEEIELALLAEELGFDKLWPVEHHFYDYSFCPDNTVFLANMAARTKRIGLATGAVIVPWNDPLRVAEKIALLDELSDGRAVFGMGRGLARREYAPFGIDMNESRERFDEASAMIVAALETGYIEG-DGPFYKQPRTPIRPRPTRSFKGRTYCVSMSPDSVLSAARLGAQQVMFSQNHWEENKGMIDAYKEEYAKHHAGPPPPP 226
BLAST of mRNA_M-pyrifera_M_contig106550.1419.1 vs. uniprot
Match: A0A2D7I3Y2_9DELT (Bac_luciferase domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D7I3Y2_9DELT) HSP 1 Score: 244 bits (624), Expect = 3.230e-77 Identity = 123/208 (59.13%), Postives = 148/208 (71.15%), Query Frame = 1 Query: 1 SDVYREEMELATRADELGFDLIGIVEHHFEDYSFCPDNFVYLANLAARTKNAKLMTGAVIIPWND-PLRVAEKAALLDELSGGRLILGLGRGLSRREYDRFGINMDESRERFDEATPMILAALETGTMAAHDGKYYHQPEAPIRPVPTRSFKGRINQVAMSGDSVIEAAVHGAKMMQFSYKPMSVHKEEIDTYAAEYRRRHNAAPPVP 621 S VY E+ +A +A+E GFD + +VEHHF DY+FCPDNFVYLAN+AART KL TGA I+PWN P+RVAEKAALLD +SGGR +LG+GRGLSR E++ FGI M ESRERFDE+ PMI+ ALETG M HDGK++ Q IRP P RSFKGR QVAMS +S ++AA G MM FS K K E + Y A + + H PP P Sbjct: 20 SQVYDEDTTMALQAEEQGFDHLWVVEHHFADYAFCPDNFVYLANIAARTSRIKLATGAAILPWNSQPIRVAEKAALLDHMSGGRFMLGIGRGLSRHEFEGFGIEMGESRERFDESAPMIIEALETGWMEEHDGKHFKQKRTEIRPRPERSFKGRTWQVAMSPESALQAAHLGLPMMAFSIKAREQEKAEFEDYRAAFIKEHATEPPRP 227
BLAST of mRNA_M-pyrifera_M_contig106550.1419.1 vs. uniprot
Match: A7HU28_PARL1 (Alkanal monooxygenase (FMN-linked) n=13 Tax=Bacteria TaxID=2 RepID=A7HU28_PARL1) HSP 1 Score: 221 bits (563), Expect = 5.070e-68 Identity = 113/205 (55.12%), Postives = 143/205 (69.76%), Query Frame = 1 Query: 7 VYREEMELATRADELGFDLIGIVEHHFEDYSFCPDNFVYLANLAARTKNAKLMTGAVIIPWNDPLRVAEKAALLDELSGGRLILGLGRGLSRREYDRFGINMDESRERFDEATPMILAALETGTMAAHDGKYYHQPEAPIRPVPTRSFKGRINQVAMSGDSVIEAAVHGAKMMQFSYKPMSVHKEEIDTYAAEYRRRHNA-APPV 618 VY EE+ L A+ELGFD + VEHHFEDYSFCPDN +L+ +AARTK KL TGAVI+PWN P+R+AEK LLD L GR + G+GRGL+R+EY G+NMDE+R+RFDEA+PMI+ ALETG + G +Y Q IRP P SFK RI QVAMS +SV++ A GA+M+ F+ KP E + Y A Y+ +H APP+ Sbjct: 24 VYDEEIRLGLLAEELGFDALWPVEHHFEDYSFCPDNTQFLSYMAARTKRIKLGTGAVILPWNVPVRIAEKVVLLDHLCQGRTLFGMGRGLARKEYAGMGVNMDEARQRFDEASPMIIDALETGFIEG-SGPFYPQKRTEIRPNPRGSFKERIYQVAMSPESVLQCAKAGARMVIFAQKPWEAQAEAVKEYKAAYKTQHGEDAPPI 227
BLAST of mRNA_M-pyrifera_M_contig106550.1419.1 vs. uniprot
Match: A0A424JVE5_9PROT (LLM class flavin-dependent oxidoreductase n=2 Tax=Bacteria TaxID=2 RepID=A0A424JVE5_9PROT) HSP 1 Score: 219 bits (558), Expect = 3.120e-67 Identity = 109/206 (52.91%), Postives = 145/206 (70.39%), Query Frame = 1 Query: 4 DVYREEMELATRADELGFDLIGIVEHHFEDYSFCPDNFVYLANLAARTKNAKLMTGAVIIPWN-DPLRVAEKAALLDELSGGRLILGLGRGLSRREYDRFGINMDESRERFDEATPMILAALETGTMAAHDGKYYHQPEAPIRPVPTRSFKGRINQVAMSGDSVIEAAVHGAKMMQFSYKPMSVHKEEIDTYAAEYRRRHNAAPPV 618 +V+REE+ LA +A++LGFD I VEHHFEDYSFCPDN V L+ LAA+T +L GAVI+PWN PLRVAEK A+LDELS GR ++G GRGL+R E++ G++M ESR RFDE+ PMI+ ALETG M H G+++ Q APIRP P+RSF+GR QVAM+ +S + A G +M FS KP K + + Y + +++ + P Sbjct: 21 EVFREEISLALKAEDLGFDHIWCVEHHFEDYSFCPDNXVMLSYLAAQTSTIRLALGAVILPWNTQPLRVAEKVAMLDELSDGRALVGFGRGLARVEFETLGVDMGESRGRFDESAPMIIEALETGWMPEHHGQFFDQQRAPIRPKPSRSFQGRTVQVAMTPESTEQGARLGLPVMGFSIKPREKEKMDFEAYRSSFKKFNGGKEPA 226
BLAST of mRNA_M-pyrifera_M_contig106550.1419.1 vs. uniprot
Match: A0A7Y3DBH8_9DELT (LLM class flavin-dependent oxidoreductase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3DBH8_9DELT) HSP 1 Score: 218 bits (555), Expect = 6.670e-67 Identity = 112/208 (53.85%), Postives = 138/208 (66.35%), Query Frame = 1 Query: 1 SDVYREEMELATRADELGFDLIGIVEHHFEDYSFCPDNFVYLANLAARTKNAKLMTGAVIIPWNDPLRVAEKAALLDELSGGRLILGLGRGLSRREYDRFGINMDESRERFDEATPMILAALETGTMAAHDGKYYHQPEAPIRPVPTRSFKGRINQVAMSGDSVIEAAVHGAKMMQFSYKPMSVHKEE-IDTYAAEYRRRHNAAPPVP 621 +D+ R EM +A RA++LGFD + EHHF DYS CPDN +L LA RT +L TGA+I+PWNDPLRV EK A LD LSGGR +LGLGRGL+R EY F I+M ESR+RFDEA+ MI+ AL+TG + DG YY Q E PIRP P F+ R V MS DSV + A GA++M FS KP +++ E +D Y YR H P P Sbjct: 19 ADMVRGEMAIAERAEDLGFDKLWPAEHHFTDYSACPDNVQFLTWLAGRTSTLRLGTGAIIVPWNDPLRVVEKIAFLDHLSGGRAVLGLGRGLARTEYHHFQIDMSESRDRFDEASRMIIEALDTGVIRG-DGPYYPQVETPIRPAPLSGFRDRFYCVGMSPDSVEQCAALGARLMTFSQKPWELYRTETLDAYQRSYRGHHGTDAPPP 225
BLAST of mRNA_M-pyrifera_M_contig106550.1419.1 vs. uniprot
Match: UPI0007C85690 (LLM class flavin-dependent oxidoreductase n=1 Tax=Nocardia mikamii TaxID=508464 RepID=UPI0007C85690) HSP 1 Score: 217 bits (552), Expect = 1.890e-66 Identity = 111/208 (53.37%), Postives = 140/208 (67.31%), Query Frame = 1 Query: 4 DVYREEMELATRADELGFDLIGIVEHHFED-YSFCPDNFVYLANLAARTKNAKLMTGAVIIPWNDPLRVAEKAALLDELSGGRLILGLGRGLSRREYDRFGINMDESRERFDEATPMILAALETGTMAAHDGKYYHQPEAPIRPVPTRSFKGRINQVAMSGDSVIEAAVHGAKMMQFSYKPM-SVHKEEIDTYAAEYRRRHNAAPPVP 621 D++++++ L+ RADE G++ IG VEHHF+ YS CPDN +L+ LA RTKNAKL T AVI+PWNDP+RV EK ALLD LS GR + G+GRGL+RREY+ FGI+M ESRERFDEA M++ LE G +DGKYY Q + P+ P P +FKGR VAMS DS + A G MM F PM ++H I+ Y YR H P P Sbjct: 20 DIFKDQIALSLRADEDGYESIGCVEHHFDPGYSMCPDNTQFLSYLAGRTKNAKLQTTAVILPWNDPMRVVEKIALLDNLSDGRAMFGMGRGLARREYEGFGIDMGESRERFDEAAEMVMRGLEDG-FVENDGKYYPQAKVPVHPRPLATFKGRTTMVAMSPDSAVVAGKLGLPMMAFIQGPMETMHMPMIEQYRQAYRDNHGGEAPAP 226 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106550.1419.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106550.1419.1 >prot_M-pyrifera_M_contig106550.1419.1 ID=prot_M-pyrifera_M_contig106550.1419.1|Name=mRNA_M-pyrifera_M_contig106550.1419.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp MELATRADELGFDLIGIVEHHFEDYSFCPDNFVYLANLAARTKNAKLMTGback to top mRNA from alignment at M-pyrifera_M_contig106550:3..623+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106550.1419.1 ID=mRNA_M-pyrifera_M_contig106550.1419.1|Name=mRNA_M-pyrifera_M_contig106550.1419.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=621bp|location=Sequence derived from alignment at M-pyrifera_M_contig106550:3..623+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106550:3..623+ >mRNA_M-pyrifera_M_contig106550.1419.1 ID=mRNA_M-pyrifera_M_contig106550.1419.1|Name=mRNA_M-pyrifera_M_contig106550.1419.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1200bp|location=Sequence derived from alignment at M-pyrifera_M_contig106550:3..623+ (Macrocystis pyrifera P11B4 male)back to top |