mRNA_M-pyrifera_M_contig106535.1412.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106535.1412.1 vs. uniprot
Match: A0A2D5AS06_9BACT (DNA-binding response regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AS06_9BACT) HSP 1 Score: 263 bits (673), Expect = 1.490e-86 Identity = 130/200 (65.00%), Postives = 160/200 (80.00%), Query Frame = 1 Query: 7 TKRILVVEDERTLAMGIRDALVHAGFEAEAVYDGDAGLERASSGDFDLVVLDLMLPGRNGLELLKALRKHDHKIRVVMLTALSEEGHVLQCFEAGADDYMSKPFSPRELVARIQAQFRRATGEPSTVPMQLELPDGVSVDLARLEVHRGEEVIMLTPREGDILEYLIKHNEKVVTREDLLRDVWQYRNPNVATRTVDIHI 606 T+RILVVEDE LA GIRDAL HAG++A+ +DG+ LE+ S FDLVVLD+MLPG+NGL++L+ LR+ H +R+VMLTAL++E V++ FE GADDYM KPFSPRELVAR+ AQFRR + + P QL+LP + VDLARLEVHR VI LTPREGDILEYL++H+++VVTREDLL DVW YRN N+ TRTVDIHI Sbjct: 2 TQRILVVEDEEALASGIRDALSHAGYDADIAHDGNGALEKISQDSFDLVVLDIMLPGKNGLDVLRELREKRHDVRIVMLTALADEADVVRGFELGADDYMPKPFSPRELVARVNAQFRRREMDTAPPP-QLDLPGAIKVDLARLEVHRDGNVIPLTPREGDILEYLVRHHDRVVTREDLLLDVWHYRNANIETRTVDIHI 200
BLAST of mRNA_M-pyrifera_M_contig106535.1412.1 vs. uniprot
Match: A0A7Y4T2P3_9BACT (Response regulator transcription factor n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4T2P3_9BACT) HSP 1 Score: 262 bits (669), Expect = 6.040e-86 Identity = 134/199 (67.34%), Postives = 156/199 (78.39%), Query Frame = 1 Query: 10 KRILVVEDERTLAMGIRDALVHAGFEAEAVYDGDAGLERASSGDFDLVVLDLMLPGRNGLELLKALRKHDHKIRVVMLTALSEEGHVLQCFEAGADDYMSKPFSPRELVARIQAQFRRATGEPSTVPMQLELPDGVSVDLARLEVHRGEEVIMLTPREGDILEYLIKHNEKVVTREDLLRDVWQYRNPNVATRTVDIHI 606 +RILVVEDE LA GIRDAL HAGFE E +DG LE FDL+VLDLMLPG++GLE+LK LR H++RVV+LTALS+E V++ FE GADDYM+KPFSPRELVAR+ AQFRR + S P QL LP G+ VDLARLEVHR +V+ LTPREGDILEYL++H ++VVTREDLL DVW YRN NV TRTVDIHI Sbjct: 3 QRILVVEDEVALASGIRDALTHAGFETEVAHDGAGALEAFKKSRFDLIVLDLMLPGKSGLEVLKELRALRHEVRVVVLTALSDESDVVRGFEMGADDYMAKPFSPRELVARVHAQFRRKEMD-SAPPPQLSLPGGIQVDLARLEVHRDGKVLPLTPREGDILEYLVRHRDRVVTREDLLLDVWHYRNANVETRTVDIHI 200
BLAST of mRNA_M-pyrifera_M_contig106535.1412.1 vs. uniprot
Match: A0A518EQV4_9BACT (Alkaline phosphatase synthesis transcriptional regulatory protein PhoP n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EQV4_9BACT) HSP 1 Score: 257 bits (657), Expect = 6.400e-84 Identity = 130/200 (65.00%), Postives = 162/200 (81.00%), Query Frame = 1 Query: 10 KRILVVEDERTLAMGIRDALVHAGFEAEAVYDGDAGLERASSGDFDLVVLDLMLPGRNGLELLKALRKHDHKIRVVMLTALSEEGHVLQCFEAGADDYMSKPFSPRELVARIQAQFRRAT-GEPSTVPMQLELPDGVSVDLARLEVHRGEEVIMLTPREGDILEYLIKHNEKVVTREDLLRDVWQYRNPNVATRTVDIHI 606 +RILVVEDE LA+GIRDA+ HAGFEA +DG+ L+ A +G FDL+VLDLMLPG++GL++LK LR +H +RV++LTAL++E +++ FEAGADDYM KPFSPREL+ARI+AQFRR T GE + P ++LP + VDLARLEVHR E I LTPREGDIL YLI+HN++VVTREDLL DVW Y++ NV TRTVDIHI Sbjct: 17 RRILVVEDEEALAIGIRDAVEHAGFEAAVAHDGNTALDVARNGGFDLIVLDLMLPGQSGLDVLKKLRADNHTVRVLVLTALADEEDIVRGFEAGADDYMKKPFSPRELLARIEAQFRRETMGEAA--PQVMDLPGDIKVDLARLEVHRDGETIPLTPREGDILAYLIQHNDRVVTREDLLLDVWHYQSANVETRTVDIHI 214
BLAST of mRNA_M-pyrifera_M_contig106535.1412.1 vs. uniprot
Match: A0A7C1WF86_9BACT (Response regulator transcription factor (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1WF86_9BACT) HSP 1 Score: 254 bits (648), Expect = 1.210e-81 Identity = 127/198 (64.14%), Postives = 156/198 (78.79%), Query Frame = 1 Query: 13 RILVVEDERTLAMGIRDALVHAGFEAEAVYDGDAGLERASSGDFDLVVLDLMLPGRNGLELLKALRKHDHKIRVVMLTALSEEGHVLQCFEAGADDYMSKPFSPRELVARIQAQFRRATGEPSTVPMQLELPDGVSVDLARLEVHRGEEVIMLTPREGDILEYLIKHNEKVVTREDLLRDVWQYRNPNVATRTVDIHI 606 +ILVVEDE LA GIRDAL HAG++ ++G+ LE FDLVVLD+MLPG++GLE+LK LR+ H +RVV+LTAL++E VL+ FE GADDYM+KPFSPRELVARI AQFRR + + P QL+LP + VDLARLEVHR +V+ LTPREGDILEYL++++++VVTREDLL DVW YRN NV TRTVDIHI Sbjct: 98 KILVVEDEEALAFGIRDALTHAGYDVSVAHEGNTALEMMKEQPFDLVVLDIMLPGKSGLEVLKELRQEKHDLRVVVLTALADESDVLRGFELGADDYMAKPFSPRELVARINAQFRRREMDTAPPP-QLDLPGDIHVDLARLEVHRDGKVVQLTPREGDILEYLVRNHDRVVTREDLLLDVWHYRNANVETRTVDIHI 294
BLAST of mRNA_M-pyrifera_M_contig106535.1412.1 vs. uniprot
Match: A0A518BQ09_9BACT (Sensory transduction protein regX3 n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BQ09_9BACT) HSP 1 Score: 246 bits (629), Expect = 1.000e-79 Identity = 122/200 (61.00%), Postives = 160/200 (80.00%), Query Frame = 1 Query: 7 TKRILVVEDERTLAMGIRDALVHAGFEAEAVYDGDAGLERASSGDFDLVVLDLMLPGRNGLELLKALRKHDHKIRVVMLTALSEEGHVLQCFEAGADDYMSKPFSPRELVARIQAQFRRATGEPSTVPMQLELPDGVSVDLARLEVHRGEEVIMLTPREGDILEYLIKHNEKVVTREDLLRDVWQYRNPNVATRTVDIHI 606 T RIL+VEDE+ LA+G+RDAL H+G E E +DG LE+ + D+DL+VLDLMLPG++GL++L+ LR D +RV++LTAL++E +L F+ GADDY++KPFS RELVARI+AQFRR + S P QL+L +G++VDL+RLEVHR E++ LTPREGDILEYLI+++E+VVTREDLL VW Y+N NV TRTVDIHI Sbjct: 12 TGRILIVEDEKALALGLRDALAHSGHEVEICHDGLTALEQLAKADYDLMVLDLMLPGKSGLDVLRELRDRDSDVRVLILTALADEESLLMGFQLGADDYVAKPFSARELVARIEAQFRRRQMDRSP-PKQLDLAEGITVDLSRLEVHRDGEIVALTPREGDILEYLIRNHERVVTREDLLLHVWHYQNANVETRTVDIHI 210
BLAST of mRNA_M-pyrifera_M_contig106535.1412.1 vs. uniprot
Match: A0A7C8CUE0_9BACT (Response regulator transcription factor n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8CUE0_9BACT) HSP 1 Score: 245 bits (626), Expect = 3.060e-79 Identity = 128/200 (64.00%), Postives = 152/200 (76.00%), Query Frame = 1 Query: 7 TKRILVVEDERTLAMGIRDALVHAGFEAEAVYDGDAGLERASSGDFDLVVLDLMLPGRNGLELLKALRKHDHKIRVVMLTALSEEGHVLQCFEAGADDYMSKPFSPRELVARIQAQFRRATGEPSTVPMQLELPDGVSVDLARLEVHRGEEVIMLTPREGDILEYLIKHNEKVVTREDLLRDVWQYRNPNVATRTVDIHI 606 T+ ILV+EDE +LA GIRDAL HAG+ V+DG+AGL G FDLVVLDLMLPG GLELLK+LR H +RVV+LTAL +E VL+ EAGADDYM KPFSP LVAR+ AQFRR + S++P L+L + VDL RLEVHRG+EV++LTPREGDIL YLI+H ++VVTR+DLL DVW Y N V TRTVDIHI Sbjct: 14 TETILVIEDELSLAAGIRDALEHAGYTVSMVHDGEAGLAAIRQGKFDLVVLDLMLPGICGLELLKSLRAERHDVRVVILTALGDEADVLRGLEAGADDYMRKPFSPAILVARVSAQFRRRDLD-SSLPDHLKLTGEIEVDLERLEVHRGDEVVLLTPREGDILRYLIEHRDRVVTRDDLLVDVWHYTNGKVETRTVDIHI 212
BLAST of mRNA_M-pyrifera_M_contig106535.1412.1 vs. uniprot
Match: A0A523PPS4_9BACT (Response regulator transcription factor n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PPS4_9BACT) HSP 1 Score: 239 bits (609), Expect = 1.460e-76 Identity = 123/200 (61.50%), Postives = 154/200 (77.00%), Query Frame = 1 Query: 7 TKRILVVEDERTLAMGIRDALVHAGFEAEAVYDGDAGLERASSGDFDLVVLDLMLPGRNGLELLKALRKHDHKIRVVMLTALSEEGHVLQCFEAGADDYMSKPFSPRELVARIQAQFRRATGEPSTVPMQLELPDGVSVDLARLEVHRGEEVIMLTPREGDILEYLIKHNEKVVTREDLLRDVWQYRNPNVATRTVDIHI 606 T+ +LVVEDE +LA+GIRDAL HAGF+ + V++G LER L+VLDLMLPG +GLE+L LR+ K+RV++LTAL++E +L+ FE GADDYM KPFSPRELVAR++AQFRR + S P LELP + VDL RLEVHR +V+ LTPREGDIL YLIKH+++VVTR+DLL DVW Y++ NV TRTVDIHI Sbjct: 21 TRDVLVVEDEESLAVGIRDALEHAGFQVDMVHEGVGALERIRRTKPGLIVLDLMLPGMSGLEILAKLREERLKVRVLILTALADEDDLLRGFEMGADDYMKKPFSPRELVARVEAQFRRREMD-SEPPQVLELPGDIRVDLHRLEVHRDGQVVPLTPREGDILSYLIKHHDRVVTRDDLLLDVWHYQSANVETRTVDIHI 219
BLAST of mRNA_M-pyrifera_M_contig106535.1412.1 vs. uniprot
Match: A0A2E5X418_9BACT (DNA-binding response regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X418_9BACT) HSP 1 Score: 231 bits (589), Expect = 1.980e-73 Identity = 118/200 (59.00%), Postives = 147/200 (73.50%), Query Frame = 1 Query: 10 KRILVVEDERTLAMGIRDALVHAGFEAEAVYDGDAGLERASSGDFDLVVLDLMLPGRNGLELLKALRKHDHKIRVVMLTALSEEGHVLQCFEAGADDYMSKPFSPRELVARIQAQFRRA-TGEPSTVPMQLELPDGVSVDLARLEVHRGEEVIMLTPREGDILEYLIKHNEKVVTREDLLRDVWQYRNPNVATRTVDIHI 606 +R+LVVEDE +A G+ DAL HAG A +V DG A LE SGDFDL++LDLMLPG NGL++L+ +R+ +V++LTAL +E +L+ F GADDYM+KPFSP EL+AR++AQFRR EP P ++L +SVDL RLEVHR E I +TPRE DI+ YLIKH E+VVTREDLLRDVW Y N + TRTVDIHI Sbjct: 29 RRVLVVEDEEAIAAGLCDALEHAGCSATSVADGSAALELIRSGDFDLILLDLMLPGMNGLDILQQMRRAGDNTQVLILTALGDEADLLRGFALGADDYMAKPFSPAELIARVEAQFRRRQANEPP--PEIVQLTSDISVDLGRLEVHRNGETIPMTPREADIMAYLIKHKERVVTREDLLRDVWHYLNATIETRTVDIHI 226
BLAST of mRNA_M-pyrifera_M_contig106535.1412.1 vs. uniprot
Match: A0A2D6HAM7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HAM7_9BACT) HSP 1 Score: 232 bits (592), Expect = 1.700e-72 Identity = 124/202 (61.39%), Postives = 147/202 (72.77%), Query Frame = 1 Query: 1 NDTKRILVVEDERTLAMGIRDALVHAGFEAEAVYDGDAGLERASSGDFDLVVLDLMLPGRNGLELLKALRKHDHKIRVVMLTALSEEGHVLQCFEAGADDYMSKPFSPRELVARIQAQFRRATGEPSTVPMQLELPDGVSVDLARLEVHRGEEVIMLTPREGDILEYLIKHNEKVVTREDLLRDVWQYRNPNVATRTVDIHI 606 N +RILVVEDE LA+GIRDAL HAGF E DG +GLE A SG L+VLDLMLPG +GLE+L+ +R +RV++LTA + E V++ + GADDYM KPF+PRELVAR+ AQFRR + S P QLELP G+SVDL RLEVHR V LTPREGDIL YLI++ +VVTR+DLL DVW Y N V TRTVDIHI Sbjct: 131 NRHERILVVEDEENLALGIRDALEHAGFTVEVALDGPSGLEAARSGAHGLMVLDLMLPGMSGLEILEQVRTEKRDLRVLILTARANEADVVRGLDMGADDYMCKPFAPRELVARVAAQFRRREIDTSPPP-QLELPGGISVDLERLEVHRDGGVQQLTPREGDILRYLIQNAHRVVTRDDLLVDVWHYSNGKVETRTVDIHI 331
BLAST of mRNA_M-pyrifera_M_contig106535.1412.1 vs. uniprot
Match: A0A2E6D7T5_9BACT (DNA-binding response regulator n=3 Tax=Planctomycetes TaxID=203682 RepID=A0A2E6D7T5_9BACT) HSP 1 Score: 228 bits (581), Expect = 5.340e-72 Identity = 116/200 (58.00%), Postives = 152/200 (76.00%), Query Frame = 1 Query: 10 KRILVVEDERTLAMGIRDALVHAGFEAEAVYDGDAGLERASSGDFDLVVLDLMLPGRNGLELLKALRKHDHKIRVVMLTALSEEGHVLQCFEAGADDYMSKPFSPRELVARIQAQFRRATGEPSTVPMQ-LELPDGVSVDLARLEVHRGEEVIMLTPREGDILEYLIKHNEKVVTREDLLRDVWQYRNPNVATRTVDIHI 606 K +LV+EDE+ LA+G+RDAL HAG+ A DG + + + DL+VLDLMLPG+NGL++L+ LR +K+RV++L+AL+ E +L F+ GADDYM KPFSPREL+AR++AQFRR E T P + LELP G+ VDLARLEVHR EV+ +TPREGD+L YLI + ++VVTR+DLL DVW Y++ NV TRTVDIHI Sbjct: 45 KTVLVIEDEQALALGLRDALEHAGYSAHLCLDGASAAAAIAEHNPDLLVLDLMLPGKNGLDVLRDLRAAGNKVRVLILSALASEEDLLAGFQLGADDYMKKPFSPRELLARVEAQFRRV--ELDTAPPEMLELPGGIRVDLARLEVHRDGEVLAITPREGDMLTYLIANRDRVVTRDDLLLDVWHYKSANVETRTVDIHI 242 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106535.1412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106535.1412.1 >prot_M-pyrifera_M_contig106535.1412.1 ID=prot_M-pyrifera_M_contig106535.1412.1|Name=mRNA_M-pyrifera_M_contig106535.1412.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=202bp NDTKRILVVEDERTLAMGIRDALVHAGFEAEAVYDGDAGLERASSGDFDLback to top mRNA from alignment at M-pyrifera_M_contig106535:20..625+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106535.1412.1 ID=mRNA_M-pyrifera_M_contig106535.1412.1|Name=mRNA_M-pyrifera_M_contig106535.1412.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=606bp|location=Sequence derived from alignment at M-pyrifera_M_contig106535:20..625+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106535:20..625+ >mRNA_M-pyrifera_M_contig106535.1412.1 ID=mRNA_M-pyrifera_M_contig106535.1412.1|Name=mRNA_M-pyrifera_M_contig106535.1412.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1212bp|location=Sequence derived from alignment at M-pyrifera_M_contig106535:20..625+ (Macrocystis pyrifera P11B4 male)back to top |