mRNA_M-pyrifera_M_contig106510.1403.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106510.1403.1 vs. uniprot
Match: A0A1J4JMU5_9EUKA (Alpha amylase, catalytic domain containing protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4JMU5_9EUKA) HSP 1 Score: 56.6 bits (135), Expect = 1.400e-7 Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 1 Query: 7 LPHWRAADVVGSPYAALRNRLARVEVRGRDEGPCSCGAVAPPLQ--GMRLMLDFVPNHTAIDCTSPASARQWLRR 225 LP W+ DV+GSPYA ++ + VE+ G +E V L+ GM+LMLDFVPNH+A+D S + + R Sbjct: 91 LPDWKEDDVIGSPYAIVKYDV-NVEIGGEEE----LKIVRQELKNRGMKLMLDFVPNHSAVDAEEAVSKKNFYIR 160
BLAST of mRNA_M-pyrifera_M_contig106510.1403.1 vs. uniprot
Match: A0A7J7IEU6_9RHOD (Aamy domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IEU6_9RHOD) HSP 1 Score: 55.1 bits (131), Expect = 4.950e-7 Identity = 29/67 (43.28%), Postives = 38/67 (56.72%), Query Frame = 1 Query: 4 VLPHWRAADVVGSPYAALRNRLARVEVRGRDEGPCSCGAVAPPLQGMRLMLDFVPNHTAIDCTSPAS 204 +LP W DV+GSPYA R+A ++ G + +AP RL+LDFVPNH A+DC P S Sbjct: 192 ILPDWTVEDVIGSPYAIYDYRIA-ADLGGEEALAVFRRRLAPA----RLLLDFVPNHMALDCPWPES 253
BLAST of mRNA_M-pyrifera_M_contig106510.1403.1 vs. uniprot
Match: K9SEL5_9CYAN (Alpha amylase catalytic region n=1 Tax=Pseudanabaena sp. PCC 7367 TaxID=82654 RepID=K9SEL5_9CYAN) HSP 1 Score: 54.3 bits (129), Expect = 9.160e-7 Identity = 30/62 (48.39%), Postives = 37/62 (59.68%), Query Frame = 1 Query: 7 LPHWRAADVVGSPYAALRNRLARVEVRGRDEGPCSCGAVAPPLQ--GMRLMLDFVPNHTAID 186 LP W++ DVVGSPYA +A EV G + A L G++LMLDFVPNHTA+D Sbjct: 84 LPDWQSIDVVGSPYA-----IAGYEVAANLGGNSALAAFRQKLASYGLKLMLDFVPNHTALD 140
BLAST of mRNA_M-pyrifera_M_contig106510.1403.1 vs. uniprot
Match: A0A1H0RRF2_9MICC (Alpha amylase, catalytic domain n=3 Tax=unclassified Arthrobacter TaxID=235627 RepID=A0A1H0RRF2_9MICC) HSP 1 Score: 53.5 bits (127), Expect = 1.720e-6 Identity = 32/64 (50.00%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 AVLPHWRAADVVGSPYAALRNRLARVEVRGRDEGPCSCGAVAPPL--QGMRLMLDFVPNHTAID 186 A LP WRA DVVGSPY +R+ + V R GP A L +G+RL+LDFVPNH A D Sbjct: 91 AALPDWRAEDVVGSPYC-VRDYV----VDDRLGGPAGLSAAREALAVRGLRLILDFVPNHVAPD 149
BLAST of mRNA_M-pyrifera_M_contig106510.1403.1 vs. uniprot
Match: UPI001CC761F5 (alpha-amylase family glycosyl hydrolase n=1 Tax=Arthrobacter sp. NicSoilB8 TaxID=2830998 RepID=UPI001CC761F5) HSP 1 Score: 53.1 bits (126), Expect = 2.350e-6 Identity = 32/64 (50.00%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 AVLPHWRAADVVGSPYAALRNRLARVEVRGRDEGPCSCGAVAPPL--QGMRLMLDFVPNHTAID 186 A LP WRA DVVGSPY +R+ + V R GP A L +G+RL+LDFVPNH A D Sbjct: 112 AALPDWRAEDVVGSPYC-VRDYV----VDDRLGGPAGLSAAREALAVRGVRLILDFVPNHVAPD 170
BLAST of mRNA_M-pyrifera_M_contig106510.1403.1 vs. uniprot
Match: A0A1G9IEE7_9MICC (Alpha amylase, catalytic domain n=2 Tax=Arthrobacter sp. ov407 TaxID=1761748 RepID=A0A1G9IEE7_9MICC) HSP 1 Score: 53.1 bits (126), Expect = 2.350e-6 Identity = 32/64 (50.00%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 1 AVLPHWRAADVVGSPYAALRNRLARVEVRGRDEGPCSCGAVAPPL--QGMRLMLDFVPNHTAID 186 A LP WRA DVVGSPY +R+ + V R GP A L +G+RL+LDFVPNH A D Sbjct: 112 AALPDWRAEDVVGSPYC-VRDYV----VDDRLGGPAGLSAAREALAVRGVRLILDFVPNHVAPD 170
BLAST of mRNA_M-pyrifera_M_contig106510.1403.1 vs. uniprot
Match: A0A7W0WWZ6_9DELT (Alpha-amylase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0WWZ6_9DELT) HSP 1 Score: 52.8 bits (125), Expect = 3.180e-6 Identity = 28/62 (45.16%), Postives = 37/62 (59.68%), Query Frame = 1 Query: 7 LPHWRAADVVGSPYAALRNRLARVEVRGRDEGPCSCGAVAPPL--QGMRLMLDFVPNHTAID 186 LP WR DV GSPYA +AR EV G + ++ L +G+R++LDFVPNH A+D Sbjct: 69 LPGWREEDVAGSPYA-----IARYEVADEFGGDAALASLRTRLSKRGIRVILDFVPNHVALD 125
BLAST of mRNA_M-pyrifera_M_contig106510.1403.1 vs. uniprot
Match: A0A2V8R1D5_9BACT (Alpha-amylase n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8R1D5_9BACT) HSP 1 Score: 52.8 bits (125), Expect = 3.200e-6 Identity = 34/73 (46.58%), Postives = 40/73 (54.79%), Query Frame = 1 Query: 7 LPHWRAADVVGSPYAALRNRLARVEVRGRDEGPCSCGAVAPPLQGMRLMLDFVPNHTAIDCTSPASARQWLRR 225 LP + D+VGSPYA + R+ G DEG A L G+RLMLDFVPNH AID T A + L R Sbjct: 81 LPDFTDEDIVGSPYAIVAYRVD--PALGGDEGLADVRARLSEL-GLRLMLDFVPNHMAIDHTWTAEHPERLVR 150
BLAST of mRNA_M-pyrifera_M_contig106510.1403.1 vs. uniprot
Match: UPI000AAAE4BB (alpha-amylase family glycosyl hydrolase n=1 Tax=Arthrobacter sp. 9MFCol3.1 TaxID=1150398 RepID=UPI000AAAE4BB) HSP 1 Score: 52.8 bits (125), Expect = 3.210e-6 Identity = 33/66 (50.00%), Postives = 36/66 (54.55%), Query Frame = 1 Query: 1 AVLPHWRAADVVGSPYA----ALRNRLARVEVRGRDEGPCSCGAVAPPLQGMRLMLDFVPNHTAID 186 A LP WRA DVVGSPY A NRL G EG S +G+RL+LDFVPNH A D Sbjct: 91 AALPDWRADDVVGSPYCVMDYAADNRL------GGPEG-LSAARAELAARGLRLILDFVPNHVAPD 149
BLAST of mRNA_M-pyrifera_M_contig106510.1403.1 vs. uniprot
Match: I0H1X0_ACTM4 (Putative glycosyl hydrolase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NBRC 102363 / NCIMB 12654 / NRRL B-3342 / UNCC 431) TaxID=512565 RepID=I0H1X0_ACTM4) HSP 1 Score: 52.0 bits (123), Expect = 5.990e-6 Identity = 31/73 (42.47%), Postives = 38/73 (52.05%), Query Frame = 1 Query: 7 LPHWRAADVVGSPYAALRNRLARVEVRGRDEGPCSCGAVAPPL--QGMRLMLDFVPNHTAIDCTSPASARQWL 219 LP + ADVVGSPY R R V R GP A L +G+RL+LD+VPNHTA D + +W Sbjct: 81 LPDFTPADVVGSPYCVRRYR-----VDDRLGGPDGLAAARAELNRRGLRLVLDYVPNHTAPDHPATVEHPEWF 148 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106510.1403.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106510.1403.1 >prot_M-pyrifera_M_contig106510.1403.1 ID=prot_M-pyrifera_M_contig106510.1403.1|Name=mRNA_M-pyrifera_M_contig106510.1403.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp AVLPHWRAADVVGSPYAALRNRLARVEVRGRDEGPCSCGAVAPPLQGMRLback to top mRNA from alignment at M-pyrifera_M_contig106510:6..287+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106510.1403.1 ID=mRNA_M-pyrifera_M_contig106510.1403.1|Name=mRNA_M-pyrifera_M_contig106510.1403.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=282bp|location=Sequence derived from alignment at M-pyrifera_M_contig106510:6..287+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106510:6..287+ >mRNA_M-pyrifera_M_contig106510.1403.1 ID=mRNA_M-pyrifera_M_contig106510.1403.1|Name=mRNA_M-pyrifera_M_contig106510.1403.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig106510:6..287+ (Macrocystis pyrifera P11B4 male)back to top |