mRNA_M-pyrifera_M_contig106459.1399.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106459.1399.1 vs. uniprot
Match: A0A5A8E390_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E390_CAFRO) HSP 1 Score: 160 bits (404), Expect = 6.140e-43 Identity = 68/111 (61.26%), Postives = 87/111 (78.38%), Query Frame = 1 Query: 25 VMIGVGIVDGTWRHGANYRHTPSTPLHPDPGAARLGVAHEAELGRWYKVDVFLNWQNHTYRVRVDDVTMAREEPFQGDALRRIGLYLFHAGVAWFDEIYAGKEDTMGFECP 357 VMIGVG+VDG W G+NYRH+P+ P G+A L V AE GRWYK+DV ++W NHT+RVR+DDVT+A + PF G A+RR+G+Y+F AG AWFDE+YAG +DT+GFECP Sbjct: 1096 VMIGVGVVDGRWAFGSNYRHSPTQ--EPAAGSAALVVTRAAEAGRWYKIDVLISWTNHTFRVRIDDVTVALDVPFTGSAVRRLGMYMFEAGEAWFDEVYAGPDDTLGFECP 1204
BLAST of mRNA_M-pyrifera_M_contig106459.1399.1 vs. uniprot
Match: A0A813CFB8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CFB8_9DINO) HSP 1 Score: 127 bits (320), Expect = 1.300e-34 Identity = 58/98 (59.18%), Postives = 72/98 (73.47%), Query Frame = 1 Query: 25 VMIGVGIVDGTWRHGANYRHTPSTPLHPDPGAARLGVAHEAELGRWYKVDVFLNWQNHTYRVRVDDVTMAREEPFQGDALRRIGLYLFHAGVAWFDEI 318 VMIGVG+VDG++RH ANYRHTP L L +A L WYKVD+F+NW N TY+VR++DVT+ R+ PF G A+RRIGLY +HAGVAWFDE+ Sbjct: 100 VMIGVGVVDGSFRHDANYRHTPGVDLPAQSPETVLQRNVQAHL--WYKVDIFINWANSTYKVRINDVTLVRDIPFNGSAVRRIGLYNYHAGVAWFDEV 195
BLAST of mRNA_M-pyrifera_M_contig106459.1399.1 vs. uniprot
Match: A0A7S1CKH0_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKH0_9STRA) HSP 1 Score: 118 bits (296), Expect = 2.180e-28 Identity = 52/114 (45.61%), Postives = 71/114 (62.28%), Query Frame = 1 Query: 16 NGDVMIGVGIVDGTWRHGANYRHTPSTPLHPDPGAARLGVAHEAELGRWYKVDVFLNWQNHTYRVRVDDVTMAREEPFQGDALRRIGLYLFHAGVAWFDEIYAGKEDTMGFECP 357 +G +IGV +VDG+WR+ +NYRH P+ D + A A +WYKVD+F++W Y +R+DD+ R F G+A+RRIG Y FH + DE+YAG DTMGFECP Sbjct: 972 DGAALIGVAVVDGSWRYDSNYRHVPAG--RTDQPQQHV-FARNAAANQWYKVDIFIDWDKKEYLIRLDDIMRVRRVKFIGEAIRRIGFYSFHGSTIYIDEVYAGPADTMGFECP 1082
BLAST of mRNA_M-pyrifera_M_contig106459.1399.1 vs. uniprot
Match: A0A329S493_9STRA (EF-hand domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S493_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.230e-21 Identity = 46/125 (36.80%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 1 DVGRENGDVMIGVGIVDGTWRHGANYRHTPSTPLHPDPGAARLGVAHEAELGRWYKVDVFLNWQNHTYRVRVDDVTMAREEPFQGDALRRIGLYLFHAGVAWFDEIYAGKEDTMGFECPLVERLT 375 D N ++MI + +VDG + H N P R + + RWYK+DV L+W NHTY +R++DV + FQG+++ + L FHA W+DEIY GK+ +GF CP V ++T Sbjct: 830 DAVEANDEIMISIALVDGRFTHEGNTFQWP-----------RQTFQDKIQTDRWYKLDVTLDWLNHTYSIRLNDVLKVKRAKFQGESVAALSLNNFHAMSTWWDEIYVGKDYLLGFSCPWVRQVT 943
BLAST of mRNA_M-pyrifera_M_contig106459.1399.1 vs. uniprot
Match: W2PG33_PHYPN (EF-hand domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PG33_PHYPN) HSP 1 Score: 98.6 bits (244), Expect = 2.230e-21 Identity = 47/128 (36.72%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 1 DVGRENGDVMIGVGIVDGTWRHGANYRHTPSTPLHPDPGAARLGVAHEAELGRWYKVDVFLNWQNHTYRVRVDDVTMAREEPFQGDALRRIGLYLFHAGVAWFDEIYAGKEDTMGFECPLVERLTSQS 384 DV NG++MI + +VDG++ H AN P R + + RWYK+DV L+W NH Y +R+++V FQG+++ I L HA W+DEIY GK+ +GF CP V+++T + Sbjct: 832 DVAATNGEIMISIALVDGSFTHEANTFQWP-----------RHVFQDKIQTDRWYKLDVTLDWVNHMYSIRLNEVLKVSGAKFQGESVAAISLNNLHAMSTWWDEIYVGKDYLLGFTCPWVKKVTDSA 948
BLAST of mRNA_M-pyrifera_M_contig106459.1399.1 vs. uniprot
Match: G5AAW6_PHYSP (EF-hand domain-containing protein n=2 Tax=Phytophthora sojae TaxID=67593 RepID=G5AAW6_PHYSP) HSP 1 Score: 96.3 bits (238), Expect = 1.440e-20 Identity = 44/125 (35.20%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 16 NGDVMIGVGIVDGTWRHGANYRHTPSTPLHPDPGAARLGVAHEAELGRWYKVDVFLNWQNHTYRVRVDDVTMAREEPFQGDALRRIGLYLFHAGVAWFDEIYAGKEDTMGFECPLVERLTSQSQA 390 N ++MI + IVDG++ H AN P R + + RWYK+DV L+WQ HTY +R++DV FQG+++ + L FHA W+DE+Y G + +GF CP + ++ + A Sbjct: 857 NDEIMIAIAIVDGSFMHEANTYQWP-----------RRVFQDKVQTDRWYKLDVTLDWQTHTYSIRLNDVLKVNAAAFQGESVAALSLSNFHAMSTWWDELYVGNDYLLGFTCPWIRQVADTAAA 970
BLAST of mRNA_M-pyrifera_M_contig106459.1399.1 vs. uniprot
Match: A0A0P1AK50_PLAHL (Carbohydratebinding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AK50_PLAHL) HSP 1 Score: 94.0 bits (232), Expect = 9.210e-20 Identity = 43/121 (35.54%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 22 DVMIGVGIVDGTWRHGANYRHTPSTPLHPDPGAARLGVAHEAELGRWYKVDVFLNWQNHTYRVRVDDVTMAREEPFQGDALRRIGLYLFHAGVAWFDEIYAGKEDTMGFECPLVERLTSQS 384 + MI V ++DG++ H AN P R + + RWYK+DV L+WQ+HTY +R++DV FQG+++ + L HA W+DEIY G + +GF CP V+++T ++ Sbjct: 810 EAMISVALIDGSFAHEANTLELP-----------RQFFQDKLQTERWYKLDVTLDWQSHTYSIRLNDVLKVNTAAFQGESVAALSLNNLHAMSTWWDEIYVGVDYLLGFTCPWVQQITDET 919
BLAST of mRNA_M-pyrifera_M_contig106459.1399.1 vs. uniprot
Match: H3GX84_PHYRM (EF-hand domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GX84_PHYRM) HSP 1 Score: 93.2 bits (230), Expect = 1.720e-19 Identity = 44/130 (33.85%), Postives = 66/130 (50.77%), Query Frame = 1 Query: 1 DVGRENGDVMIGVGIVDGTWRHGANYRHTPSTPLHPDPGAARLGVAHEAELGRWYKVDVFLNWQNHTYRVRVDDVTMAREEPFQGDALRRIGLYLFHAGVAWFDEIYAGKEDTMGFECPLVERLTSQSQA 390 D N +MI + +VDG++ H AN P H + + RWYK+D+ L+W HTY +R++DV FQG ++ + L FHA W+DEIY GK+ +GF CP + + + A Sbjct: 871 DAAPANDAIMIAIALVDGSFAHEANTFQWPRHIFHD-----------KVQTDRWYKLDMTLDWNTHTYSIRLNDVLKVAGAAFQGKSVAALSLNNFHAMSTWWDEIYVGKDFLLGFSCPWIRNVPDTAAA 989
BLAST of mRNA_M-pyrifera_M_contig106459.1399.1 vs. uniprot
Match: A0A6A3LHL3_9STRA (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LHL3_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 5.950e-19 Identity = 44/125 (35.20%), Postives = 66/125 (52.80%), Query Frame = 1 Query: 16 NGDVMIGVGIVDGTWRHGANYRHTPSTPLHPDPGAARLGVAHEAELGRWYKVDVFLNWQNHTYRVRVDDVTMAREEPFQGDALRRIGLYLFHAGVAWFDEIYAGKEDTMGFECPLVERLTSQSQA 390 N ++MI + IVDG++ H AN P R + + + RWYK+DV L+WQ HTY +R++DV FQG ++ + L HA W+DEIY G + +GF CP ++ + A Sbjct: 834 NDELMIAIAIVDGSFVHEANSYQWP-----------RHVIQEKVQTDRWYKLDVTLDWQAHTYSIRLNDVLKVNGAAFQGASVAALSLSNLHAMSTWWDEIYVGNDYLLGFSCPWTRQVADTASA 947
BLAST of mRNA_M-pyrifera_M_contig106459.1399.1 vs. uniprot
Match: K3X2K1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2K1_GLOUD) HSP 1 Score: 88.6 bits (218), Expect = 7.100e-18 Identity = 44/129 (34.11%), Postives = 64/129 (49.61%), Query Frame = 1 Query: 22 DVMIGVGIVDGTWRHGANYRHTPSTPLHPDPGAARLGVAHEAELGRWYKVDVFLNWQNHTYRVRVDDVTMAREEPFQGDALRRIGLYLFHAGVAWFDEIYAGKEDTMGFECPLV------ERLTSQSQA 390 + MI +GI+DG + H N P P + + RWYKVD+F+NW HTY ++++D+ + F G ++ + + HA W+DEIY GK MGF CP V TS SQ+ Sbjct: 732 EFMISIGIIDGVFTHEPNAFQWPRRTFQP-----------KIQPNRWYKVDLFINWYQHTYSIQLNDILKVQNVTFNGVSVGSVSVNNLHAMSTWWDEIYVGKNHLMGFVCPHVIADKRSTAFTSNSQS 849 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106459.1399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106459.1399.1 >prot_M-pyrifera_M_contig106459.1399.1 ID=prot_M-pyrifera_M_contig106459.1399.1|Name=mRNA_M-pyrifera_M_contig106459.1399.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp MIGVGIVDGTWRHGANYRHTPSTPLHPDPGAARLGVAHEAELGRWYKVDVback to top mRNA from alignment at M-pyrifera_M_contig106459:215..604+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106459.1399.1 ID=mRNA_M-pyrifera_M_contig106459.1399.1|Name=mRNA_M-pyrifera_M_contig106459.1399.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=390bp|location=Sequence derived from alignment at M-pyrifera_M_contig106459:215..604+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106459:215..604+ >mRNA_M-pyrifera_M_contig106459.1399.1 ID=mRNA_M-pyrifera_M_contig106459.1399.1|Name=mRNA_M-pyrifera_M_contig106459.1399.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig106459:215..604+ (Macrocystis pyrifera P11B4 male)back to top |