mRNA_M-pyrifera_M_contig106452.1396.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106452.1396.1 vs. uniprot
Match: A0A812TWD4_9DINO (OSBPL5 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TWD4_9DINO) HSP 1 Score: 75.5 bits (184), Expect = 2.460e-14 Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = 1 Query: 19 ETLGSEPKEDPPPHPSLVAQIISALAPGQDLTRVSIPSWFLEPRSILEKMTDTCMHVDLI 198 ETLG D HPS++ ++ +L PGQDLTRV+IPSWFLE RS+LEKM DT MH DL+ Sbjct: 47 ETLGGAHNTDELEHPSMMGHLVRSLMPGQDLTRVTIPSWFLESRSLLEKMADTLMHPDLL 106
BLAST of mRNA_M-pyrifera_M_contig106452.1396.1 vs. uniprot
Match: A0A7S1CPG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPG8_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 7.680e-13 Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 1 Query: 1 SIPDPEETLGSEPKEDPPPHPSLVAQIISALAPGQDLTRVSIPSWFLEPRSILEKMTDTCMHVDLITE 204 ++PDP ETLG + + P P+++ ++ L PGQDLTRV+IPS++LE RS+LEK+ D MH LI + Sbjct: 31 TVPDPSETLGGKTDDIEPDAPNVIMHVVKQLMPGQDLTRVTIPSFYLESRSLLEKLADVMMHPQLIID 98
BLAST of mRNA_M-pyrifera_M_contig106452.1396.1 vs. uniprot
Match: D8M297_BLAHO (Uncharacterized protein n=2 Tax=Blastocystis hominis TaxID=12968 RepID=D8M297_BLAHO) HSP 1 Score: 66.6 bits (161), Expect = 3.190e-11 Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 1 Query: 1 SIPDPEETLGSEPKEDPPPHPSLVAQIISALAPGQDLTRVSIPSWFLEPRSILEKMTDTCMHVDLI 198 ++ DPE T G E +P PSL I+ +L PGQDLTRV IP +FL PRS+LE + D MHVDL+ Sbjct: 23 TVEDPENTRGGEITGEPYVQPSLFMHILKSLKPGQDLTRVLIPVFFLAPRSLLEHLGDMLMHVDLL 88
BLAST of mRNA_M-pyrifera_M_contig106452.1396.1 vs. uniprot
Match: A0A196SN89_BLAHN (Oxysterol-binding protein-related protein n=2 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SN89_BLAHN) HSP 1 Score: 65.9 bits (159), Expect = 6.010e-11 Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 1 Query: 1 SIPDPEETLGSEPKEDPPPHPSLVAQIISALAPGQDLTRVSIPSWFLEPRSILEKMTDTCMHVDLI 198 ++ DPE T G E +P PSL I+ +L PGQDLTRV IP +FL PRS+LE + D MH+D++ Sbjct: 23 TVEDPENTRGGEIAGEPYVQPSLFMHILKSLKPGQDLTRVLIPVFFLSPRSLLEHLGDMLMHIDIL 88
BLAST of mRNA_M-pyrifera_M_contig106452.1396.1 vs. uniprot
Match: A0A482RLZ0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RLZ0_9ARCH) HSP 1 Score: 58.2 bits (139), Expect = 3.040e-8 Identity = 25/39 (64.10%), Postives = 33/39 (84.62%), Query Frame = 1 Query: 82 ISALAPGQDLTRVSIPSWFLEPRSILEKMTDTCMHVDLI 198 + +L PGQDLT V+IP++FLEPRS+LE+M DT MH DL+ Sbjct: 91 VRSLMPGQDLTSVTIPAFFLEPRSLLERMADTLMHPDLL 129
BLAST of mRNA_M-pyrifera_M_contig106452.1396.1 vs. uniprot
Match: A0A8J9TZU5_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9TZU5_BRAAE) HSP 1 Score: 54.3 bits (129), Expect = 7.350e-7 Identity = 22/48 (45.83%), Postives = 36/48 (75.00%), Query Frame = 1 Query: 58 HPSLVAQIISALAPGQDLTRVSIPSWFLEPRSILEKMTDTCMHVDLIT 201 H SL+ I+ + PG DL++V +P++ LEPRS L+K++D+ HVD++T Sbjct: 335 HKSLIWYIVKQVRPGMDLSKVVLPTFILEPRSFLDKLSDSYYHVDILT 382
BLAST of mRNA_M-pyrifera_M_contig106452.1396.1 vs. uniprot
Match: N6UQU2_DENPD (Oxysterol-binding protein (Fragment) n=6 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6UQU2_DENPD) HSP 1 Score: 54.3 bits (129), Expect = 7.350e-7 Identity = 22/49 (44.90%), Postives = 37/49 (75.51%), Query Frame = 1 Query: 58 HPSLVAQIISALAPGQDLTRVSIPSWFLEPRSILEKMTDTCMHVDLITE 204 H SL+ +I + PG DL++V +P++ LEPRS L+K++D+ HVD++T+ Sbjct: 343 HKSLIWYLIRQVRPGMDLSKVVLPTFILEPRSFLDKLSDSYYHVDILTQ 391
BLAST of mRNA_M-pyrifera_M_contig106452.1396.1 vs. uniprot
Match: A0A7S1L794_NEODS (Hypothetical protein n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1L794_NEODS) HSP 1 Score: 53.9 bits (128), Expect = 9.790e-7 Identity = 24/49 (48.98%), Postives = 41/49 (83.67%), Query Frame = 1 Query: 64 SLVAQIISA--LAPGQDLTRVSIPSWFLEPRSILEKMTDTCMHVDLITE 204 SL+ Q+ISA L+ G DL++V++P++ LEPRS+LEK++DT +H +++T+ Sbjct: 43 SLLLQLISANGLSMGMDLSKVALPTFILEPRSLLEKLSDTVIHPEILTD 91
BLAST of mRNA_M-pyrifera_M_contig106452.1396.1 vs. uniprot
Match: A0A0T6BHB0_9SCAR (Oxysterol-binding protein (Fragment) n=1 Tax=Oryctes borbonicus TaxID=1629725 RepID=A0A0T6BHB0_9SCAR) HSP 1 Score: 53.5 bits (127), Expect = 1.220e-6 Identity = 21/48 (43.75%), Postives = 36/48 (75.00%), Query Frame = 1 Query: 58 HPSLVAQIISALAPGQDLTRVSIPSWFLEPRSILEKMTDTCMHVDLIT 201 H SL+ ++ + PG DL++V +P++ LEPRS L+K+TD+ HVD+++ Sbjct: 43 HKSLIWYLVKQVRPGMDLSKVVLPTFILEPRSFLDKLTDSYYHVDILS 90
BLAST of mRNA_M-pyrifera_M_contig106452.1396.1 vs. uniprot
Match: A0A183VER1_TOXCA (PH domain-containing protein n=2 Tax=Toxocara canis TaxID=6265 RepID=A0A183VER1_TOXCA) HSP 1 Score: 53.5 bits (127), Expect = 1.330e-6 Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 1 Query: 64 SLVAQIISALAPGQDLTRVSIPSWFLEPRSILEKMTDTCMHVDLITE 204 SLV ++ + PG DL++V++P++ LEPRS LEK+ D HVDL+ E Sbjct: 345 SLVWSLLKQIRPGMDLSKVTLPTFILEPRSFLEKLADFYYHVDLLKE 391 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106452.1396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106452.1396.1 >prot_M-pyrifera_M_contig106452.1396.1 ID=prot_M-pyrifera_M_contig106452.1396.1|Name=mRNA_M-pyrifera_M_contig106452.1396.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=69bp SIPDPEETLGSEPKEDPPPHPSLVAQIISALAPGQDLTRVSIPSWFLEPRback to top mRNA from alignment at M-pyrifera_M_contig106452:384..590+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106452.1396.1 ID=mRNA_M-pyrifera_M_contig106452.1396.1|Name=mRNA_M-pyrifera_M_contig106452.1396.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=207bp|location=Sequence derived from alignment at M-pyrifera_M_contig106452:384..590+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106452:384..590+ >mRNA_M-pyrifera_M_contig106452.1396.1 ID=mRNA_M-pyrifera_M_contig106452.1396.1|Name=mRNA_M-pyrifera_M_contig106452.1396.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=414bp|location=Sequence derived from alignment at M-pyrifera_M_contig106452:384..590+ (Macrocystis pyrifera P11B4 male)back to top |