mRNA_M-pyrifera_M_contig106450.1394.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106450.1394.1 vs. uniprot
Match: A0A6I6AI90_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6AI90_9PLAN) HSP 1 Score: 375 bits (964), Expect = 6.480e-117 Identity = 187/208 (89.90%), Postives = 189/208 (90.87%), Query Frame = 1 Query: 1 SSFAAALDFDKSGRVDYRDLTYLASNYNKRKGGNSEVIFPTNFGQKWIGTQLEVNSGDDTIDEVVEAAVNTWEAALGLDEPLEVQIIVQDFGTAQLGSGQTTEYNVDGVPVAGRVVIDNDANGLGWHVDVTDAPTGGSYDLFTVLLHEIGHVLGFTRYYSGFNNLVNDDGLGGLTFVGSDFTVELDPTGLHIEDPAVGDDLMNDTLDP 624 SSFAAALDF KRKGGNSEVIFPTNFGQKWIGTQLEVNSGDDTIDEVVEAAVNTWEAALGLDEPLEVQIIVQDFGTAQLGSGQTTEYNVDGVPVAGRVVIDNDANGLGWHVDVTDAPTGGSYDLFTVLLHEIGHVLGFTRYYSGFNNLV+DDG+GGLTFVGSDFTVELDPTGLHIEDPAVGDDLMNDTLDP Sbjct: 2127 SSFAAALDFXXXXXXXXXXXXXXXXXXXKRKGGNSEVIFPTNFGQKWIGTQLEVNSGDDTIDEVVEAAVNTWEAALGLDEPLEVQIIVQDFGTAQLGSGQTTEYNVDGVPVAGRVVIDNDANGLGWHVDVTDAPTGGSYDLFTVLLHEIGHVLGFTRYYSGFNNLVDDDGMGGLTFVGSDFTVELDPTGLHIEDPAVGDDLMNDTLDP 2334
BLAST of mRNA_M-pyrifera_M_contig106450.1394.1 vs. uniprot
Match: A0A2E7K7Q2_9PLAN (Probable pectate lyase C n=4 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K7Q2_9PLAN) HSP 1 Score: 373 bits (957), Expect = 5.830e-116 Identity = 187/208 (89.90%), Postives = 187/208 (89.90%), Query Frame = 1 Query: 1 SSFAAALDFDKSGRVDYRDLTYLASNYNKRKGGNSEVIFPTNFGQKWIGTQLEVNSGDDTIDEVVEAAVNTWEAALGLDEPLEVQIIVQDFGTAQLGSGQTTEYNVDGVPVAGRVVIDNDANGLGWHVDVTDAPTGGSYDLFTVLLHEIGHVLGFTRYYSGFNNLVNDDGLGGLTFVGSDFTVELDPTGLHIEDPAVGDDLMNDTLDP 624 SSFAAAL KRKGGNSEVIFPTNFGQKWIGTQLEVNSGDDTIDEVVEAAVNTWEAALGLDEPLEVQIIVQDFGTAQLGSGQTTEYNVDGVPVAGRVVIDNDANGLGWHVDVTDAPTGGSYDLFTVLLHEIGHVLGFTRYYSGFNNLVNDDGLGGLTFVGSDFTVELDPTGLHIEDPAVGDDLMNDTLDP Sbjct: 5443 SSFAAALXXXXXXXXXXXXXXXXXXXXXKRKGGNSEVIFPTNFGQKWIGTQLEVNSGDDTIDEVVEAAVNTWEAALGLDEPLEVQIIVQDFGTAQLGSGQTTEYNVDGVPVAGRVVIDNDANGLGWHVDVTDAPTGGSYDLFTVLLHEIGHVLGFTRYYSGFNNLVNDDGLGGLTFVGSDFTVELDPTGLHIEDPAVGDDLMNDTLDP 5650
BLAST of mRNA_M-pyrifera_M_contig106450.1394.1 vs. uniprot
Match: A0A518FU83_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FU83_9PLAN) HSP 1 Score: 337 bits (865), Expect = 1.360e-103 Identity = 165/208 (79.33%), Postives = 177/208 (85.10%), Query Frame = 1 Query: 1 SSFAAALDFDKSGRVDYRDLTYLASNYNKRKGGNSEVIFPTNFGQKWIGTQLEVNSGDDTIDEVVEAAVNTWEAALGLDEPLEVQIIVQDFGTAQLGSGQTTEYNVDGVPVAGRVVIDNDANGLGWHVDVTDAPTGGSYDLFTVLLHEIGHVLGFTRYYSGFNNLVNDDGLGGLTFVGSDFTVELDPTGLHIEDPAVGDDLMNDTLDP 624 S FAAALDFDKS KRK GN+EV FP NFGQKWIGTQLEVNSGDDTIDEVV AAV+TWE ALGLDEPL VQ+IVQDFGTAQLGSGQTTEYNVDGVPVAGRVVID+DANGLGW+VD+TDAPT G YDL+TVLLHEIGHVLGFTRYY+GF NLV DG G LTFVGSDFTV+LD TGLH++DPA+GDDLMNDTLDP Sbjct: 5443 SEFAAALDFDKSXXXXXXXXXXXXXXXXKRKSGNTEVNFPANFGQKWIGTQLEVNSGDDTIDEVVAAAVDTWETALGLDEPLNVQVIVQDFGTAQLGSGQTTEYNVDGVPVAGRVVIDDDANGLGWNVDLTDAPTAGGYDLYTVLLHEIGHVLGFTRYYAGFGNLVQSDGSGNLTFVGSDFTVDLDSTGLHLDDPAIGDDLMNDTLDP 5650
BLAST of mRNA_M-pyrifera_M_contig106450.1394.1 vs. uniprot
Match: A0A518AB66_9PLAN (Probable pectate lyase C n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AB66_9PLAN) HSP 1 Score: 335 bits (859), Expect = 8.740e-103 Identity = 165/208 (79.33%), Postives = 176/208 (84.62%), Query Frame = 1 Query: 1 SSFAAALDFDKSGRVDYRDLTYLASNYNKRKGGNSEVIFPTNFGQKWIGTQLEVNSGDDTIDEVVEAAVNTWEAALGLDEPLEVQIIVQDFGTAQLGSGQTTEYNVDGVPVAGRVVIDNDANGLGWHVDVTDAPTGGSYDLFTVLLHEIGHVLGFTRYYSGFNNLVNDDGLGGLTFVGSDFTVELDPTGLHIEDPAVGDDLMNDTLDP 624 S FAAALDFDKS KRK GN+EV FP NFGQKWIGTQLEVNSGDDTIDEVV AAV+TWE ALGLDEPL VQ+IVQDFGTAQLGSGQTTEYNVDGVPVAGRVVID+DANGLGW+VD+TDAPT G YDL+TVLLHEIGHVLGFTRYY+GF NLV DG G LTFVGSDFTV+LD TGLHI+DPA+ DDLMNDTLDP Sbjct: 5318 SEFAAALDFDKSXXXXXXXXXXXXXXXXKRKSGNTEVNFPANFGQKWIGTQLEVNSGDDTIDEVVAAAVDTWETALGLDEPLNVQVIVQDFGTAQLGSGQTTEYNVDGVPVAGRVVIDDDANGLGWNVDLTDAPTAGGYDLYTVLLHEIGHVLGFTRYYAGFGNLVQADGSGNLTFVGSDFTVDLDSTGLHIDDPAIADDLMNDTLDP 5525
BLAST of mRNA_M-pyrifera_M_contig106450.1394.1 vs. uniprot
Match: A0A517RKF3_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RKF3_9PLAN) HSP 1 Score: 331 bits (848), Expect = 2.630e-101 Identity = 156/208 (75.00%), Postives = 176/208 (84.62%), Query Frame = 1 Query: 1 SSFAAALDFDKSGRVDYRDLTYLASNYNKRKGGNSEVIFPTNFGQKWIGTQLEVNSGDDTIDEVVEAAVNTWEAALGLDEPLEVQIIVQDFGTAQLGSGQTTEYNVDGVPVAGRVVIDNDANGLGWHVDVTDAPTGGSYDLFTVLLHEIGHVLGFTRYYSGFNNLVNDDGLGGLTFVGSDFTVELDPTGLHIEDPAVGDDLMNDTLDP 624 ++F + +DFDKSGRVD RDL L SNY K+K GN+ V+FP NFGQ W+GT L+V SGDD+I +V+EAAV+TWE ALGLDEPLEV++IV+DFGTAQLGSGQTTEYN DG+PV GRV ID+DANGLGWHVDVTD P GG YDL+TVLLHEIGHVLGFTRYYSGF +LV DG G L FVGSDFTV LD TGLH EDPA DDLMNDTLDP Sbjct: 5312 AAFTSVMDFDKSGRVDIRDLRELISNYGKQKSGNTNVVFPANFGQTWVGTSLDVVSGDDSIGQVIEAAVDTWETALGLDEPLEVEVIVRDFGTAQLGSGQTTEYNADGIPVGGRVAIDDDANGLGWHVDVTDLPVGGGYDLYTVLLHEIGHVLGFTRYYSGFGSLVETDGNGDLVFVGSDFTVALDSTGLHTEDPAFPDDLMNDTLDP 5519
BLAST of mRNA_M-pyrifera_M_contig106450.1394.1 vs. uniprot
Match: A0A517WHU1_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WHU1_9PLAN) HSP 1 Score: 325 bits (833), Expect = 2.740e-99 Identity = 160/208 (76.92%), Postives = 174/208 (83.65%), Query Frame = 1 Query: 1 SSFAAALDFDKSGRVDYRDLTYLASNYNKRKGGNSEVIFPTNFGQKWIGTQLEVNSGDDTIDEVVEAAVNTWEAALGLDEPLEVQIIVQDFGTAQLGSGQTTEYNVDGVPVAGRVVIDNDANGLGWHVDVTDAPTGGSYDLFTVLLHEIGHVLGFTRYYSGFNNLVNDDGLGGLTFVGSDFTVELDPTGLHIEDPAVGDDLMNDTLDP 624 SSFAAAL KRKGGNSEVIFPTNFGQKWIGTQLEV SGDD+IDEVVEAAV+ WE ALGLDEPL VQ++VQDFGTAQLGSGQ+TEYNVDG+PV GRVVID+DANGLGWHVD+TDAPT GSYDLFTVLLHEIGHVLGFTRY++GFN+ V DDG G L+FVGSDFTVELD GLHIEDP +G+DLMNDTLDP Sbjct: 5440 SSFAAALXXXXXXXXXXXXXXXXXXXXXKRKGGNSEVIFPTNFGQKWIGTQLEVASGDDSIDEVVEAAVDAWETALGLDEPLNVQVVVQDFGTAQLGSGQSTEYNVDGIPVGGRVVIDDDANGLGWHVDLTDAPTAGSYDLFTVLLHEIGHVLGFTRYFTGFNHHVVDDGSGNLSFVGSDFTVELDSMGLHIEDPVIGNDLMNDTLDP 5647
BLAST of mRNA_M-pyrifera_M_contig106450.1394.1 vs. uniprot
Match: A0A517WRI1_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WRI1_9PLAN) HSP 1 Score: 302 bits (774), Expect = 2.340e-91 Identity = 149/208 (71.63%), Postives = 166/208 (79.81%), Query Frame = 1 Query: 1 SSFAAALDFDKSGRVDYRDLTYLASNYNKRKGGNSEVIFPTNFGQKWIGTQLEVNSGDDTIDEVVEAAVNTWEAALGLDEPLEVQIIVQDFGTAQLGSGQTTEYNVDGVPVAGRVVIDNDANGLGWHVDVTDAPTGGSYDLFTVLLHEIGHVLGFTRYYSGFNNLVNDDGLGGLTFVGSDFTVELDPTGLHIEDPAVGDDLMNDTLDP 624 S+FAAA+DFDKSG NK K GN++V FP NFGQKWIGT L+V SGDD ID+VVEAAV+TWE ALGL+EPLEVQ+IV+DFGTAQLGSGQTTE + DG+PVAGRVVID+DANGLGWHVD T+ P GG YDL+TVLLHEIGHVLGFTRYYSGF + V D G L FVGSDFTV LD GLHIEDP+ DDLMN TLDP Sbjct: 5357 SAFAAAMDFDKSGXXXXXXXXXXXXXXNKSKSGNTQVNFPLNFGQKWIGTSLDVVSGDDNIDQVVEAAVDTWETALGLEEPLEVQVIVRDFGTAQLGSGQTTEISADGIPVAGRVVIDDDANGLGWHVDSTELPPGGGYDLYTVLLHEIGHVLGFTRYYSGFGDHVETDNNGDLVFVGSDFTVALDSAGLHIEDPSFPDDLMNATLDP 5564
BLAST of mRNA_M-pyrifera_M_contig106450.1394.1 vs. uniprot
Match: A0A518IHD7_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IHD7_9PLAN) HSP 1 Score: 301 bits (771), Expect = 5.930e-91 Identity = 143/186 (76.88%), Postives = 161/186 (86.56%), Query Frame = 1 Query: 67 LASNYNKRKGGNSEVIFPTNFGQKWIGTQLEVNSGDDTIDEVVEAAVNTWEAALGLDEPLEVQIIVQDFGTAQLGSGQTTEYNVDGVPVAGRVVIDNDANGLGWHVDVTDAPTGGSYDLFTVLLHEIGHVLGFTRYYSGFNNLVNDDGLGGLTFVGSDFTVELDPTGLHIEDPAVGDDLMNDTLDP 624 L SNY KRK N +V FP +FGQKW+GT L+V SGDD+I++V+EAAV+TWE ALGLDEPLEV++IV+DFGTAQLGSGQTTEYN D +PVAGRV ID+DANGLGWHVDVTD P GG YDL+TVLLHEIGHVLGFTRYYSGF +LV G G LTFVGSDFTV LDPTGLH +DPA+ DDLMNDTLDP Sbjct: 5274 LISNYGKRKSQNPQVSFPDSFGQKWVGTSLDVVSGDDSIEQVIEAAVDTWETALGLDEPLEVEVIVRDFGTAQLGSGQTTEYNADHIPVAGRVAIDDDANGLGWHVDVTDLPAGGGYDLYTVLLHEIGHVLGFTRYYSGFGSLVETGGTGDLTFVGSDFTVALDPTGLHTDDPALLDDLMNDTLDP 5459
BLAST of mRNA_M-pyrifera_M_contig106450.1394.1 vs. uniprot
Match: A0A355GE00_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355GE00_9PLAN) HSP 1 Score: 288 bits (737), Expect = 6.440e-91 Identity = 141/208 (67.79%), Postives = 167/208 (80.29%), Query Frame = 1 Query: 1 SSFAAALDFDKSGRVDYRDLTYLASNYNKRKGGNSEVIFPTNFGQKWIGTQLEVNSGDDTIDEVVEAAVNTWEAALGLDEPLEVQIIVQDFGTAQLGSGQTTEYNVDGVPVAGRVVIDNDANGLGWHVDVTDAPTGGSYDLFTVLLHEIGHVLGFTRYYSGFNNLVNDDGLGGLTFVGSDFTVELDPTGLHIEDPAVGDDLMNDTLDP 624 S +A+A LA NY KRKGGN++V FP NFGQKW+G QLEV SGDD++D+V+EAA++TWE ALG+++ L+VQ+IV DFGTAQLGSGQ+T YNVDG+PV GRVVID+DANGLGWHVDVTD P G+YDL+TVLLHEIGHVLGFTRY+SGF +LV + G G L FVGSDFTV LD TGLH+EDPA DDLM+DTLDP Sbjct: 264 SPYASAXXXXXXXXXXXXXXXXLAGNYGKRKGGNTQVNFPANFGQKWVGNQLEVASGDDSVDQVIEAALDTWETALGVED-LDVQVIVHDFGTAQLGSGQSTVYNVDGIPVGGRVVIDDDANGLGWHVDVTDLPAIGAYDLYTVLLHEIGHVLGFTRYFSGFGSLVEEIG-GELVFVGSDFTVNLDSTGLHVEDPAFADDLMSDTLDP 469
BLAST of mRNA_M-pyrifera_M_contig106450.1394.1 vs. uniprot
Match: A0A350K907_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K907_9PLAN) HSP 1 Score: 290 bits (741), Expect = 7.210e-91 Identity = 138/208 (66.35%), Postives = 168/208 (80.77%), Query Frame = 1 Query: 1 SSFAAALDFDKSGRVDYRDLTYLASNYNKRKGGNSEVIFPTNFGQKWIGTQLEVNSGDDTIDEVVEAAVNTWEAALGLDEPLEVQIIVQDFGTAQLGSGQTTEYNVDGVPVAGRVVIDNDANGLGWHVDVTDAPTGGSYDLFTVLLHEIGHVLGFTRYYSGFNNLVNDDGLGGLTFVGSDFTVELDPTGLHIEDPAVGDDLMNDTLDP 624 S +A+A LA NY K+K GN+++ +P NFGQKW+G QLEV SGDD++D+V+EAA++TWE ALG+ E L+VQ++V DFGTAQLGSGQ+TEY+VDG+PV GRVVID+DANGLGWHVDVTD PTGG+YDL+TVLLHEIGHVLGFTRY+SGF +LV + G G L FVGSDFTV LD TGLH++DPA DDLM+DTLDP Sbjct: 328 SPYASAXXXXXXXXXXXXXXXXLAGNYGKKKSGNTQINYPANFGQKWVGNQLEVASGDDSVDQVIEAAIDTWETALGV-ENLDVQVVVHDFGTAQLGSGQSTEYSVDGIPVGGRVVIDDDANGLGWHVDVTDLPTGGAYDLYTVLLHEIGHVLGFTRYFSGFGSLVEESG-GDLVFVGSDFTVALDSTGLHVDDPAYADDLMSDTLDP 533 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106450.1394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106450.1394.1 >prot_M-pyrifera_M_contig106450.1394.1 ID=prot_M-pyrifera_M_contig106450.1394.1|Name=mRNA_M-pyrifera_M_contig106450.1394.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=208bp SSFAAALDFDKSGRVDYRDLTYLASNYNKRKGGNSEVIFPTNFGQKWIGTback to top mRNA from alignment at M-pyrifera_M_contig106450:3..626+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106450.1394.1 ID=mRNA_M-pyrifera_M_contig106450.1394.1|Name=mRNA_M-pyrifera_M_contig106450.1394.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig106450:3..626+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106450:3..626+ >mRNA_M-pyrifera_M_contig106450.1394.1 ID=mRNA_M-pyrifera_M_contig106450.1394.1|Name=mRNA_M-pyrifera_M_contig106450.1394.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1248bp|location=Sequence derived from alignment at M-pyrifera_M_contig106450:3..626+ (Macrocystis pyrifera P11B4 male)back to top |