mRNA_M-pyrifera_M_contig106424.1386.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106424.1386.1 vs. uniprot
Match: A0A2D9CJJ8_9BACT (Cytochrome c domain-containing protein n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A2D9CJJ8_9BACT) HSP 1 Score: 341 bits (875), Expect = 8.590e-109 Identity = 157/209 (75.12%), Postives = 179/209 (85.65%), Query Frame = 1 Query: 1 VKQFAFNQHALNLPPQELGEFMEGKVAFETRWDDGLLFNPPTAFDCNGGPVGFNMGESPVFEPGLLGPLYTNNSCIECHMLDGRGLAPRTSDDPLDDYVIRVSIPGAPGEAPQPHPFYGEQLDTKAVPGATAEGGASIIWEIINGSFNDGTPYELRKPRVEFSDLLYGEIGTNIPGTAAASTAGGPYKGEAEVSVRIASMLVGLGLLEA 627 V QFAFNQHALNL P +L FM+GKV FETRWDDGLLFNPPTAFDCNGGPV FNMG SPV+EP LLGP YTNNSCIECHMLDGRGLAP ++ D L+DY +R+SIPG PG+APQPHP YG+QLDT+A PGAT EG A+I+WEI+NG+F+DG YELRKPR EF+DLLYG+ GTNIPG A + A PY+GEAEVSVR+A ML+GLGLLEA Sbjct: 393 VNQFAFNQHALNLQPDDLLAFMDGKVIFETRWDDGLLFNPPTAFDCNGGPVNFNMGPSPVYEPDLLGPGYTNNSCIECHMLDGRGLAPESAADSLEDYAVRISIPGPPGQAPQPHPLYGDQLDTRATPGATPEGKAAIVWEIVNGTFDDGMTYELRKPRYEFTDLLYGQFGTNIPGQPAPTPASDPYEGEAEVSVRVAPMLIGLGLLEA 601
BLAST of mRNA_M-pyrifera_M_contig106424.1386.1 vs. uniprot
Match: A0A2E0XYM0_9BACT (Cytochrome c domain-containing protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E0XYM0_9BACT) HSP 1 Score: 189 bits (479), Expect = 6.620e-52 Identity = 105/208 (50.48%), Postives = 131/208 (62.98%), Query Frame = 1 Query: 7 QFAFNQHALNLPPQELGEFMEGKVAFETRWDDGLLFNPPTAFDCNGGPVGFNMGESPVFEPGLLGPLYTNNSCIECHMLDGRGLAPRTSDDPLDDYVIRVSIPGAPGE-APQPHPFYGEQLDTKAVPGATAEGGASIIWEIINGSFNDGTPYELRKPRVEFSDLLYGEIGTNIPGTAAASTAGGPYKGEAEVSVRIASMLVGLGLLEA 627 +F F QHA L EL FM+GKV FET +++ L N T F C GP+G + ESPVF+P ++GP Y SCI+CH++DGRG P S D L V ++S+PG AP PHPFYG QLD +A G T EG + +E I G+F+DGTPY LRKP +F DL +G +GTNIP + T G + G AE S RIA ML GLG LEA Sbjct: 405 RFGFAQHASTLKLDELKAFMDGKVFFETDFENADLLNLGTHFTCCAGPLGQVILESPVFKPDVIGPRYAAASCIQCHVMDGRGPTPFESQD-LFALVAQLSVPGQDSTGAPIPHPFYGSQLDVEAAEGHTPEGRLQVAYEYIEGAFDDGTPYTLRKPTYQFLDLAHGSLGTNIPDQS--GTPG--HDGPAEFSPRIAPMLAGLGFLEA 607
BLAST of mRNA_M-pyrifera_M_contig106424.1386.1 vs. uniprot
Match: A0A2E5EDG8_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E5EDG8_9BACT) HSP 1 Score: 174 bits (441), Expect = 1.020e-46 Identity = 101/209 (48.33%), Postives = 124/209 (59.33%), Query Frame = 1 Query: 7 QFAFNQHALNLPPQELGEFMEGKVAFETRWDDGLLFNPPTAFDCNGGPVGFNMGESPVFEPGLLGPLYTNNSCIECHMLDGRGLAPRTSDDPLDDYVIRVSIPGAP--GEAPQPHPFYGEQLDTKAVPGATAEGGASIIWEIINGSFNDGTPYELRKPRVEFSDLLYGEIGTNIPGTAAASTAGGPYKGEAEVSVRIASMLVGLGLLEA 627 +F F QHA L EL FM+GKV FET +++ L N T F C GP+G + ESP F+ G++GP Y SCI+CH +DGRG P D L V + SIPG GE P PHP+YG QLD EG + +E I G F+DGTPY LRKP F D+ YG +G+NIP ST G Y+G AE S RIA +L GLG+LEA Sbjct: 402 RFGFAQHASTLSLNELKAFMDGKVIFETDFENSDLLNFTTHFTCCAGPIGQTIVESPAFKNGVIGPRYAAASCIQCHNMDGRGATPFEGSD-LVSLVAQTSIPGQGDFGE-PVPHPYYGSQLDVATEGDIEPEGRLQVEYEEIAGHFDDGTPYSLRKPTYRFMDMSYGSLGSNIPDEF--STPG--YQGMAEFSPRIAPILPGLGMLEA 604
BLAST of mRNA_M-pyrifera_M_contig106424.1386.1 vs. uniprot
Match: A0A2D4WSN4_9PLAN (Cytochrome c domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D4WSN4_9PLAN) HSP 1 Score: 159 bits (401), Expect = 2.620e-41 Identity = 94/208 (45.19%), Postives = 111/208 (53.37%), Query Frame = 1 Query: 7 QFAFNQHALNLPPQELGEFMEGKVAFETRWDDGLLFNPPTAFDCNGGPVGFNMGESPVFEPGLLGPLYTNNSCIECHMLDGRGLAPRTSDDPLDDYVIRVSIPGAPG-EAPQPHPFYGEQLDTKAVPGATAEGGASIIWEIINGSFNDGTPYELRKPRVEFSDLLYGEIGTNIPGTAAASTAGGPYKGEAEVSVRIASMLVGLGLLEA 627 +F F QHA NL +EL F+ GK FET DGLL N PT FDC GP+GF + SP P LGP + SCI CH +DGRG P D L V+++S AP P P YG Q DT + G EG + +EII G+F+DGTPY+LRKP F D L+G P K A S RIA ML G GLLEA Sbjct: 402 RFGFAQHANNLTIEELNHFLAGKERFETDHADGLLKNFPTWFDCCSGPIGFGLKPSPHALPNALGPSFNAPSCIACHHMDGRGATPTGEXDTLISLVMQLSTDETDAFGAPVPDPRYGRQFDTASTSGTQPEGRLLVEYEIIEGTFDDGTPYQLRKPGYRFXDTLHGA----------------PTK--ARQSARIAPMLAGTGLLEA 591
BLAST of mRNA_M-pyrifera_M_contig106424.1386.1 vs. uniprot
Match: A0A523MIN4_9GAMM (Thiol oxidoreductase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523MIN4_9GAMM) HSP 1 Score: 117 bits (293), Expect = 3.800e-27 Identity = 59/145 (40.69%), Postives = 87/145 (60.00%), Query Frame = 1 Query: 196 LGPLYTNNSCIECHMLDGRGLAPRTSDDPLDDYVIRVSIPG-APGEAPQPHPFYGEQLDTKAVPGATAEGGASIIWEIINGSFNDGTPYELRKPRVEFSDLLYGEIGTNIPGTAAASTAGGPYKGEAEVSVRIASMLVGLGLLEA 627 LGP++ ++C +CH+ +GRG AP D+P++ ++R+S+ G P P P YG+QL +++ G AEG A + WE + G + DGTPY LR+P + F+ L +GE+ G+ VSVRIAS L+GLGLLEA Sbjct: 134 LGPVFNRSACADCHVNNGRGRAPAAPDEPMESILVRISLYGEGPHGEPLGVPGYGDQLQDRSIDGVAAEGTAHMTWEAVPGEYADGTPYSLRRPILNFTALAFGEL-----------------PGDTRVSVRIASPLIGLGLLEA 261
BLAST of mRNA_M-pyrifera_M_contig106424.1386.1 vs. uniprot
Match: A0A250IB05_9DELT (Thiol oxidoreductase n=1 Tax=Melittangium boletus DSM 14713 TaxID=1294270 RepID=A0A250IB05_9DELT) HSP 1 Score: 116 bits (290), Expect = 6.760e-27 Identity = 73/207 (35.27%), Postives = 101/207 (48.79%), Query Frame = 1 Query: 13 AFNQHALNLPPQELGEFMEGKVAFETRWDDGLLFNPPTAFDCNGGPVGFNMGESPVFEPGLLGPLYTNNSCIECHMLDGRGLAPRTSDDPLDDYVIRVSIPGAPGE--APQPHPFYGEQLDTKAVPGATAEGGASIIWEIINGSFNDGTPYELRKPRVEFSDLLYGEIGTNIPGTAAASTAGGPYKGEAEVSVRIASMLVGLGLLEA 627 AF++ A NLP + L F G+ FE W P D +G LGPL+ SC CH +GRG P + D P ++R+S+PG GE P+P P YG+QL T+++PG AEG A++ WE +G+F DG + LR PR + L +G + ++ VS R+A LVG GLLEA Sbjct: 56 AFSRPAPNLPTERLSAFGAGEALFEADW----FAAPHARADRDG-----------------LGPLFNAVSCEACHFQNGRGTPPLSEDQPTVSLLLRLSVPGT-GEHGGPRPEPTYGDQLQTRSIPGVPAEGRATLEWEERSGTFADGEAWTLRAPRYRLTQLAHGPLAADV-----------------RVSPRVAQPLVGPGLLEA 223
BLAST of mRNA_M-pyrifera_M_contig106424.1386.1 vs. uniprot
Match: A0A1X7QF66_AZOLI (CxxC motif-containing protein, DUF1111 family n=2 Tax=Azospirillum TaxID=191 RepID=A0A1X7QF66_AZOLI) HSP 1 Score: 115 bits (289), Expect = 8.230e-27 Identity = 72/206 (34.95%), Postives = 97/206 (47.09%), Query Frame = 1 Query: 13 AFNQHALNLPPQELGEFMEGKVAFETRWDDGLLFNPPTAFDCNGGPVGFNMGESPVFEPGLLGPLYTNNSCIECHMLDGRGLAPRTSDDPLDDYVIRVSIPGA-PGEAPQPHPFYGEQLDTKAVPGATAEGGASIIWEIINGSFNDGTPYELRKPRVEFSDLLYGEIGTNIPGTAAASTAGGPYKGEAEVSVRIASMLVGLGLLEA 627 AF++ L P + F G+ F+ W G P D +G LGPL SCI CH+ +GRG P D L ++R+S+PG PG AP PHP YG+Q + +PG EG A++IW DGTP LR+P + SDL YG +G+ + SVR+A ++GLGLLEA Sbjct: 34 AFSRPLPGLDPAQRTAFHAGRSLFQQVWTVGSSEVRP---DLDG-----------------LGPLSNRQSCIACHVKNGRGEPPEGEGDVLRSTLVRLSVPGGKPGGAPPPHPVYGDQFNPDGIPGVPGEGRATLIWSERVERLADGTPVALRRPELRLSDLAYGPLGSEVM-----------------TSVRMAPPIIGLGLLEA 202
BLAST of mRNA_M-pyrifera_M_contig106424.1386.1 vs. uniprot
Match: A0A4U0GV69_9GAMM (Thiol oxidoreductase n=1 Tax=Sinimarinibacterium sp. CAU 1509 TaxID=2562283 RepID=A0A4U0GV69_9GAMM) HSP 1 Score: 112 bits (279), Expect = 2.210e-25 Identity = 68/205 (33.17%), Postives = 96/205 (46.83%), Query Frame = 1 Query: 13 AFNQHALNLPPQELGEFMEGKVAFETRWDDGLLFNPPTAFDCNGGPVGFNMGESPVFEPGLLGPLYTNNSCIECHMLDGRGLAPRTSDDPLDDYVIRVSIPGAPGEAPQPHPFYGEQLDTKAVPGATAEGGASIIWEIINGSFNDGTPYELRKPRVEFSDLLYGEIGTNIPGTAAASTAGGPYKGEAEVSVRIASMLVGLGLLEA 627 AF+Q +L L F+ G+ F W P + G LGPLY +CI CH +GRG AP T + + ++R+S+PG G APQPHP YG+QL+ VPG EG A I+W+ + DG+ ELR P+++F DL YG + +A S R+ + GLGL++A Sbjct: 45 AFSQPWPDLDTDTLQTFLRGRTLFHQSW-----IIAPAQDQAHDG----------------LGPLYNRLACISCHPKNGRGRAPDTPLERMQSMLVRLSVPGPAGRAPQPHPRYGDQLNEDGVPGVAGEGLAGIVWQYSHIPLADGSVVELRAPQLQFRDLAYGPLD------------------DALTSPRVGPPVFGLGLIDA 210
BLAST of mRNA_M-pyrifera_M_contig106424.1386.1 vs. uniprot
Match: A0A1I1ECT7_9BACT (CxxC motif-containing protein, DUF1111 family n=1 Tax=Flexibacter flexilis DSM 6793 TaxID=927664 RepID=A0A1I1ECT7_9BACT) HSP 1 Score: 112 bits (279), Expect = 2.450e-25 Identity = 61/145 (42.07%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 196 LGPLYTNNSCIECHMLDGRGLAPRTSDDPLDDYVIRVSIPGAP--GEAPQPHPFYGEQLDTKAVPGATAEGGASIIWEIINGSFNDGTPYELRKPRVEFSDLLYGEIGTNIPGTAAASTAGGPYKGEAEVSVRIASMLVGLGLLE 624 LGPL+ + SC CH+LDGRG P + +PL +IR+S+PG+ GE P+ P YG QL A+ G AEG I ++ IN +F+DG PY+LRKP+ EF +L YG + N+ S R+A + GLGLLE Sbjct: 92 LGPLFNSKSCSGCHILDGRGKPPLSEGEPLSSMLIRLSVPGSTEHGE-PKGEPNYGGQLSNSAILGVPAEGDVKITYDYINATFDDGKPYQLRKPKYEFINLGYGAMSANVM-----------------YSPRVAPQMQGLGLLE 218
BLAST of mRNA_M-pyrifera_M_contig106424.1386.1 vs. uniprot
Match: Q1IB11_PSEE4 (Cytochrome c domain-containing protein n=3 Tax=Pseudomonas entomophila TaxID=312306 RepID=Q1IB11_PSEE4) HSP 1 Score: 111 bits (277), Expect = 3.390e-25 Identity = 58/145 (40.00%), Postives = 81/145 (55.86%), Query Frame = 1 Query: 196 LGPLYTNNSCIECHMLDGRGLAPRTSDDPLDDYVIRVSIPGAPGEA-PQPHPFYGEQLDTKAVPGATAEGGASIIWEIINGSFNDGTPYELRKPRVEFSDLLYGEIGTNIPGTAAASTAGGPYKGEAEVSVRIASMLVGLGLLEA 627 LGPLY +C+ CH +GRG AP D+P+ ++R+S+ G G P+PHP YG+Q + + +PG G A++ WE + DG ELRKPRV FS+L YG + E + S+R+AS + GLGLLEA Sbjct: 60 LGPLYNRITCVACHPRNGRGQAPSQVDEPMRSMLVRLSVDGRDGHGGPRPHPAYGDQFNEQGIPGVPGGGRATLSWETHTVTLADGELVELRKPRVHFSELAYGPLN------------------EVKTSMRVASPVFGLGLLEA 186 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106424.1386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106424.1386.1 >prot_M-pyrifera_M_contig106424.1386.1 ID=prot_M-pyrifera_M_contig106424.1386.1|Name=mRNA_M-pyrifera_M_contig106424.1386.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=209bp VKQFAFNQHALNLPPQELGEFMEGKVAFETRWDDGLLFNPPTAFDCNGGPback to top mRNA from alignment at M-pyrifera_M_contig106424:1..627- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106424.1386.1 ID=mRNA_M-pyrifera_M_contig106424.1386.1|Name=mRNA_M-pyrifera_M_contig106424.1386.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=627bp|location=Sequence derived from alignment at M-pyrifera_M_contig106424:1..627- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106424:1..627- >mRNA_M-pyrifera_M_contig106424.1386.1 ID=mRNA_M-pyrifera_M_contig106424.1386.1|Name=mRNA_M-pyrifera_M_contig106424.1386.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1254bp|location=Sequence derived from alignment at M-pyrifera_M_contig106424:1..627- (Macrocystis pyrifera P11B4 male)back to top |