mRNA_M-pyrifera_M_contig106412.1382.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106412.1382.1 vs. uniprot
Match: A0A518IVD3_9BACT (Aerobic cobaltochelatase subunit CobN n=3 Tax=Rosistilla oblonga TaxID=2527990 RepID=A0A518IVD3_9BACT) HSP 1 Score: 369 bits (947), Expect = 3.550e-116 Identity = 191/196 (97.45%), Postives = 191/196 (97.45%), Query Frame = 1 Query: 1 NFVADHARSLREQLIADGVTDEQAERQSTARVFSNESGNYGTGLNDAAYASDLWEHQQANGGDAEMASLFVNRMGYAYGEGLDGVAASDLFARQVAGVDAAFLSRSSHTYGVLTSDDPFAYLGGFGLADRATGGDKSPELYVQNLRDESEVILDSAASAIAKEMQSRYLHPQWIKAQQAEGYSGTLQVLKATQFLW 588 NFVADHARSLREQLIADG TDEQAERQSTARVFSNESG YGTGLNDAAYASDLWEHQQANGGDAEMASLFVNRMGYAYGEGLDGVAASDLFARQVAGVDAAFLSRSSHTYGVLTSDDPFAYLGGF LA RA GGDKSPELYVQNLRDESEVILDSAASAIAKEMQSRYLHPQWIKAQQAEGYSGTLQVLKATQFLW Sbjct: 1035 NFVADHARSLREQLIADGATDEQAERQSTARVFSNESGTYGTGLNDAAYASDLWEHQQANGGDAEMASLFVNRMGYAYGEGLDGVAASDLFARQVAGVDAAFLSRSSHTYGVLTSDDPFAYLGGFALAARAAGGDKSPELYVQNLRDESEVILDSAASAIAKEMQSRYLHPQWIKAQQAEGYSGTLQVLKATQFLW 1230
BLAST of mRNA_M-pyrifera_M_contig106412.1382.1 vs. uniprot
Match: A0A517M8B4_9BACT (Aerobic cobaltochelatase subunit CobN n=2 Tax=Rosistilla ulvae TaxID=1930277 RepID=A0A517M8B4_9BACT) HSP 1 Score: 340 bits (871), Expect = 2.140e-105 Identity = 175/196 (89.29%), Postives = 189/196 (96.43%), Query Frame = 1 Query: 1 NFVADHARSLREQLIADGVTDEQAERQSTARVFSNESGNYGTGLNDAAYASDLWEHQQANGGDAEMASLFVNRMGYAYGEGLDGVAASDLFARQVAGVDAAFLSRSSHTYGVLTSDDPFAYLGGFGLADRATGGDKSPELYVQNLRDESEVILDSAASAIAKEMQSRYLHPQWIKAQQAEGYSGTLQVLKATQFLW 588 NFVA+HAR LREQLIA+GV+DE+A RQSTARVFSNESGNYGTGLNDAAYASDLWE+QQANGGDAEMA LFV+RMGYAYG+GLDGVAAS+LFA+Q+AGVDAAFLSRSSHTYGVLTSDDPFAYLGGF LA RA GG+ SPELYVQNLRDESE+ILDSAASAIAKEMQ+RYLHPQWI+AQQAEGYSGTLQVLKATQFLW Sbjct: 1036 NFVANHARWLREQLIAEGVSDEEANRQSTARVFSNESGNYGTGLNDAAYASDLWEYQQANGGDAEMARLFVDRMGYAYGDGLDGVAASELFAKQLAGVDAAFLSRSSHTYGVLTSDDPFAYLGGFALAARAAGGE-SPELYVQNLRDESEIILDSAASAIAKEMQTRYLHPQWIEAQQAEGYSGTLQVLKATQFLW 1230
BLAST of mRNA_M-pyrifera_M_contig106412.1382.1 vs. uniprot
Match: A0A5B9QMG0_9BACT (Aerobic cobaltochelatase subunit CobN n=1 Tax=Roseimaritima ulvae TaxID=980254 RepID=A0A5B9QMG0_9BACT) HSP 1 Score: 276 bits (705), Expect = 1.780e-82 Identity = 140/196 (71.43%), Postives = 167/196 (85.20%), Query Frame = 1 Query: 1 NFVADHARSLREQLIADGVTDEQAERQSTARVFSNESGNYGTGLNDAAYASDLWEHQQANGGDAEMASLFVNRMGYAYGEGLDGVAASDLFARQVAGVDAAFLSRSSHTYGVLTSDDPFAYLGGFGLADRATGGDKSPELYVQNLRDESEVILDSAASAIAKEMQSRYLHPQWIKAQQAEGYSGTLQVLKATQFLW 588 N VA H+ +LRE+LIA G + + A+R +TARVFSN+ G YGTGLN+A YAS+LW+ Q GGDA MA LF RMGYAYG+ LDGVAA +LF +Q+AGVDAAFLSRSS+TYGVLTSDD FAYLGGF LA R+ G ++PEL+VQNLRDE+EVI+DSA S++AKE+Q+RYLHPQWI+AQQAEGYSGTLQVLKATQFLW Sbjct: 988 NLVAQHSAALREELIAAGTSPQLAQRHATARVFSNQPGGYGTGLNNAVYASELWDSQTNGGGDAAMADLFTQRMGYAYGKDLDGVAAGELFRKQLAGVDAAFLSRSSNTYGVLTSDDAFAYLGGFSLAARSASG-RTPELFVQNLRDENEVIIDSAGSSVAKELQTRYLHPQWIQAQQAEGYSGTLQVLKATQFLW 1182
BLAST of mRNA_M-pyrifera_M_contig106412.1382.1 vs. uniprot
Match: UPI00129855F7 (cobaltochelatase subunit CobN n=1 Tax=Roseimaritima sediminicola TaxID=2662066 RepID=UPI00129855F7) HSP 1 Score: 272 bits (695), Expect = 4.080e-81 Identity = 144/201 (71.64%), Postives = 163/201 (81.09%), Query Frame = 1 Query: 1 NFVADHARSLREQLIADGVTDEQAERQSTARVFSNESGNYGTGLNDAAYASDLWEHQQANGGDAEMASLFVNRMGYAYGEGLDGVAASDLFARQVAGVDAAFLSRSSHTYGVLTSDDPFAYLGGFGLADRATGGDKS-----PELYVQNLRDESEVILDSAASAIAKEMQSRYLHPQWIKAQQAEGYSGTLQVLKATQFLW 588 N VA HA +LRE+LI+ GV ++A RQ+T RVFSN+SG YGTG+N AAYA+DLW+ Q GGDAEMA LFV RMG+AYGEGLDG AA+DLFA +A VDAAFLSRSSHTYGVLTSDD FAYLGGF LA RA + P+LYVQNLRD EVI+D AA AIAKE+Q+RYLHPQWI+AQQAEGYSGTLQVLKA QFLW Sbjct: 985 NAVAAHAAALREELISAGVPADKARRQATIRVFSNQSGGYGTGVNHAAYATDLWQEQNRGGGDAEMADLFVQRMGFAYGEGLDGQAAADLFAAGLARVDAAFLSRSSHTYGVLTSDDAFAYLGGFALAARAAQAAEDASGTPPQLYVQNLRDGEEVIIDPAAGAIAKELQTRYLHPQWIRAQQAEGYSGTLQVLKAAQFLW 1185
BLAST of mRNA_M-pyrifera_M_contig106412.1382.1 vs. uniprot
Match: A0A5C6BSR5_9BACT (Aerobic cobaltochelatase subunit CobN n=1 Tax=Planctomycetes bacterium Poly21 TaxID=2528014 RepID=A0A5C6BSR5_9BACT) HSP 1 Score: 271 bits (693), Expect = 7.720e-81 Identity = 145/196 (73.98%), Postives = 159/196 (81.12%), Query Frame = 1 Query: 1 NFVADHARSLREQLIADGVTDEQAERQSTARVFSNESGNYGTGLNDAAYASDLWEHQQANGGDAEMASLFVNRMGYAYGEGLDGVAASDLFARQVAGVDAAFLSRSSHTYGVLTSDDPFAYLGGFGLADRATGGDKSPELYVQNLRDESEVILDSAASAIAKEMQSRYLHPQWIKAQQAEGYSGTLQVLKATQFLW 588 N+VA H LR L GV A RQSTARVFSNESG YGTGLN+AA ASD+WE Q GGD MA LF RMG+AYGEGL GV A+ LFA Q+A VDAAF++RSS+TYGVLTSDDP+AYLGGF LA RA G K PELYVQNLRDESEVI+DSA+ AIAKEMQ+RYLHPQWIKAQQAEGYSGTLQVLKAT+FLW Sbjct: 1006 NYVARHTERLRRTLEESGVAVTDAVRQSTARVFSNESGGYGTGLNNAADASDVWESQTRGGGDTAMAELFTQRMGHAYGEGLGGVPAAKLFAHQLANVDAAFMARSSNTYGVLTSDDPYAYLGGFSLAVRAAGR-KPPELYVQNLRDESEVIVDSASGAIAKEMQTRYLHPQWIKAQQAEGYSGTLQVLKATKFLW 1200
BLAST of mRNA_M-pyrifera_M_contig106412.1382.1 vs. uniprot
Match: A0A1Z8MBQ3_9BACT (Uncharacterized protein n=1 Tax=Rhodopirellula sp. TMED11 TaxID=1986614 RepID=A0A1Z8MBQ3_9BACT) HSP 1 Score: 270 bits (689), Expect = 2.780e-80 Identity = 137/196 (69.90%), Postives = 162/196 (82.65%), Query Frame = 1 Query: 1 NFVADHARSLREQLIADGVTDEQAERQSTARVFSNESGNYGTGLNDAAYASDLWEHQQANGGDAEMASLFVNRMGYAYGEGLDGVAASDLFARQVAGVDAAFLSRSSHTYGVLTSDDPFAYLGGFGLADRATGGDKSPELYVQNLRDESEVILDSAASAIAKEMQSRYLHPQWIKAQQAEGYSGTLQVLKATQFLW 588 N+VA HA ++L+A G+ + A R++TARVFS+ESG YGTGLN A Y SDLW+ QQ GGD+EM+ LF++RMG+AYGEGLDGVAA DLFARQV +D FL+RSS+TYGVLTSDDPFAYLGGF LA R GG K+P+L VQNLRD SEVI+D +AIAKEMQ+RYLHPQWI+AQ+ EGYSGTLQVLKATQFLW Sbjct: 988 NYVAQHAAEFADELVAQGMEPDMARRRATARVFSSESGTYGTGLNQAVYHSDLWKTQQRGGGDSEMSELFLHRMGHAYGEGLDGVAARDLFARQVKQLDVVFLARSSNTYGVLTSDDPFAYLGGFALASRQIGG-KTPDLVVQNLRDPSEVIIDPVETAIAKEMQTRYLHPQWIQAQKQEGYSGTLQVLKATQFLW 1182
BLAST of mRNA_M-pyrifera_M_contig106412.1382.1 vs. uniprot
Match: A0A126ZKC9_9BURK (Cobalt chelatase n=2 Tax=Variovorax sp. PAMC 28711 TaxID=1795631 RepID=A0A126ZKC9_9BURK) HSP 1 Score: 233 bits (593), Expect = 2.820e-67 Identity = 124/196 (63.27%), Postives = 152/196 (77.55%), Query Frame = 1 Query: 1 NFVADHARSLREQLIADGVTDEQAERQSTARVFSNESGNYGTGLNDAAYASDLWEHQQANGGDAEMASLFVNRMGYAYGEGLDGVAASDLFARQVAGVDAAFLSRSSHTYGVLTSDDPFAYLGGFGLADRATGGDKSPELYVQNLRDESEVILDSAASAIAKEMQSRYLHPQWIKAQQAEGYSGTLQVLKATQFLW 588 NFVA ++ +L +++A+G T QA+R STARVFSN G+YG+GL DAA ASD W+ Q GGDA+MA+L+++RMG+A G+ +DG+ +A +A VDAA LSR+S+TYG+LTSDDPF YLGG LA R G KSP LYVQNLRD SEV DSA +AIAKEMQ+RYLHPQWI AQ+AEGYSGTLQVLK QFLW Sbjct: 964 NFVARNSDALAARMVAEGATPAQAQRWSTARVFSNAQGSYGSGLADAALASDTWKMQDKAGGDAQMAALYLDRMGHAQGDDVDGMGRHKAYAANLAQVDAALLSRTSNTYGMLTSDDPFQYLGGIALAVRELTG-KSPALYVQNLRDGSEVRTDSADTAIAKEMQTRYLHPQWINAQKAEGYSGTLQVLKTAQFLW 1158
BLAST of mRNA_M-pyrifera_M_contig106412.1382.1 vs. uniprot
Match: A0A840FQD9_9BURK (Cobaltochelatase CobN n=4 Tax=Variovorax guangxiensis TaxID=1775474 RepID=A0A840FQD9_9BURK) HSP 1 Score: 232 bits (592), Expect = 3.790e-67 Identity = 121/196 (61.73%), Postives = 151/196 (77.04%), Query Frame = 1 Query: 1 NFVADHARSLREQLIADGVTDEQAERQSTARVFSNESGNYGTGLNDAAYASDLWEHQQANGGDAEMASLFVNRMGYAYGEGLDGVAASDLFARQVAGVDAAFLSRSSHTYGVLTSDDPFAYLGGFGLADRATGGDKSPELYVQNLRDESEVILDSAASAIAKEMQSRYLHPQWIKAQQAEGYSGTLQVLKATQFLW 588 N VA H+ ++ +L A+G T +A+R STARVFSNE G+YG GL +AA ASD+W++QQ GGDA+MA L+++RMG+AYG+GLDG +A +A VDAA ++RSS+ YGVLT+DDPF YLGG A R G K P LYVQNLRD +EV D+AA AIA+EMQ+RYLHPQWI+AQ+AEGYSGTLQVLK QFLW Sbjct: 956 NAVALHSEAMARKLSAEGATASEAQRWSTARVFSNEQGSYGAGLEEAALASDVWKNQQRGGGDAQMAQLYMDRMGHAYGKGLDGAVRPGAYAGNLAQVDAALMARSSNLYGVLTNDDPFQYLGGIAQAVRHLTG-KDPALYVQNLRDGAEVRTDTAAGAIAREMQTRYLHPQWIEAQKAEGYSGTLQVLKTAQFLW 1150
BLAST of mRNA_M-pyrifera_M_contig106412.1382.1 vs. uniprot
Match: A0A519EJB7_9BURK (Cobaltochelatase subunit CobN (Fragment) n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A519EJB7_9BURK) HSP 1 Score: 231 bits (588), Expect = 5.310e-67 Identity = 121/196 (61.73%), Postives = 148/196 (75.51%), Query Frame = 1 Query: 1 NFVADHARSLREQLIADGVTDEQAERQSTARVFSNESGNYGTGLNDAAYASDLWEHQQANGGDAEMASLFVNRMGYAYGEGLDGVAASDLFARQVAGVDAAFLSRSSHTYGVLTSDDPFAYLGGFGLADRATGGDKSPELYVQNLRDESEVILDSAASAIAKEMQSRYLHPQWIKAQQAEGYSGTLQVLKATQFLW 588 NFVA H+ +L ++ A G A+R STARVFSNESG+YG GL +AA AS+LW Q+ GGDA+MA LF++RMG+AYG+GLDG A FA +A VDAA +SR+S+ YGVLT+DDPF YLGG A R G K P LYVQNLR+ + V D+AA AIA+EMQ+RYLHPQWI+AQ+AEGYSG+LQVLK QFLW Sbjct: 759 NFVARHSEALARRMAASGAAPADAQRWSTARVFSNESGSYGAGLEEAALASELWRSQRRGGGDAQMAQLFMDRMGHAYGDGLDGAAPPGAFAGNLAQVDAALMSRTSNLYGVLTNDDPFQYLGGIAQAVRQLTG-KDPALYVQNLREGTAVRTDTAAGAIAREMQTRYLHPQWIEAQKAEGYSGSLQVLKTAQFLW 953
BLAST of mRNA_M-pyrifera_M_contig106412.1382.1 vs. uniprot
Match: J2JSA7_9BURK (Mg chelatase, cobalamin biosynthesis protein CobN n=7 Tax=unclassified Variovorax TaxID=663243 RepID=J2JSA7_9BURK) HSP 1 Score: 231 bits (589), Expect = 9.620e-67 Identity = 120/196 (61.22%), Postives = 148/196 (75.51%), Query Frame = 1 Query: 1 NFVADHARSLREQLIADGVTDEQAERQSTARVFSNESGNYGTGLNDAAYASDLWEHQQANGGDAEMASLFVNRMGYAYGEGLDGVAASDLFARQVAGVDAAFLSRSSHTYGVLTSDDPFAYLGGFGLADRATGGDKSPELYVQNLRDESEVILDSAASAIAKEMQSRYLHPQWIKAQQAEGYSGTLQVLKATQFLW 588 N VA H+ +L +L A+G T ++A+R STARVFSNE G+YG GL +AA ASD+W QQ GGDA+MA L+++RMG+AYG+GLDG A +A + VDAA ++RSS+ YGVLT+DDPF YLGG A R G K P LYVQNLRD V D+AA AIA+EMQ+RYLHPQW++AQ+AEGYSGTLQVLK QFLW Sbjct: 953 NAVAQHSEALARKLRAEGATAQEAQRWSTARVFSNEQGSYGAGLEEAALASDVWASQQRGGGDAQMAQLYMDRMGHAYGKGLDGAARPGAYAGNLMQVDAALMARSSNLYGVLTNDDPFQYLGGIAQAVRQLTG-KDPALYVQNLRDSGAVRTDTAAGAIAREMQTRYLHPQWVEAQKAEGYSGTLQVLKTAQFLW 1147 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106412.1382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106412.1382.1 >prot_M-pyrifera_M_contig106412.1382.1 ID=prot_M-pyrifera_M_contig106412.1382.1|Name=mRNA_M-pyrifera_M_contig106412.1382.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=196bp NFVADHARSLREQLIADGVTDEQAERQSTARVFSNESGNYGTGLNDAAYAback to top mRNA from alignment at M-pyrifera_M_contig106412:1..588- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106412.1382.1 ID=mRNA_M-pyrifera_M_contig106412.1382.1|Name=mRNA_M-pyrifera_M_contig106412.1382.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig106412:1..588- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106412:1..588- >mRNA_M-pyrifera_M_contig106412.1382.1 ID=mRNA_M-pyrifera_M_contig106412.1382.1|Name=mRNA_M-pyrifera_M_contig106412.1382.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1176bp|location=Sequence derived from alignment at M-pyrifera_M_contig106412:1..588- (Macrocystis pyrifera P11B4 male)back to top |