mRNA_M-pyrifera_M_contig106316.1367.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig106316.1367.1
Unique NamemRNA_M-pyrifera_M_contig106316.1367.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig106316.1367.1 vs. uniprot
Match: A0A517ZM64_9PLAN (Type I phosphodiesterase / nucleotide pyrophosphatase n=5 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZM64_9PLAN)

HSP 1 Score: 243 bits (620), Expect = 2.540e-71
Identity = 116/207 (56.04%), Postives = 150/207 (72.46%), Query Frame = 1
Query:    1 GTFHYSSKVVGKKFPLPAAGAGPAPCYCLIGRIGVNGVPFYVGEKQSFVAQDSGELFLGINDFDVQDNTGQIEVVIETGGGVSPVAQRRRVAFDGPSGRPIDGARVVVFYVDGLRPDVVHEMAAMGHLPNIKDLFLEGGSHLENSFTVFPSDTITSNGSLWTGMFSDRHGIKSQVGFNRKLKQSENYLGRFGPALTDLLLQPRGLDR 621
            GTF Y      ++FPLPAAG+GPAPCYCLIGRIG  G PF+VG+  S  A+ +G L+LG+NDFDV DNTG+  V +     V PV+ R+ V  D P G P  G  VVVFYVDGLRPDV+ EM+AM H+P++ + F++GG+H+ N+FT FPSDTITSNG++WTG FSDRHGIK Q+ F+R+  +SE+ L   GP+ T  LL+P G D+
Sbjct:  104 GTFFYDDSQGHQEFPLPAAGSGPAPCYCLIGRIG-EGRPFFVGDGMSIAAESTGRLYLGVNDFDVSDNTGEFYVEVSKPDTVQPVSFRQDVRRDAPEGLPAAGCSVVVFYVDGLRPDVLEEMSAMHHVPHLTEHFIDGGTHMRNTFTAFPSDTITSNGTMWTGCFSDRHGIKGQIRFSRQRLESESGLDPMGPSRTSRLLRPHGTDK 309          
BLAST of mRNA_M-pyrifera_M_contig106316.1367.1 vs. uniprot
Match: A0A517Z587_9PLAN (Type I phosphodiesterase / nucleotide pyrophosphatase n=2 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z587_9PLAN)

HSP 1 Score: 239 bits (610), Expect = 7.490e-70
Identity = 120/208 (57.69%), Postives = 147/208 (70.67%), Query Frame = 1
Query:    1 GTFHYSSKVVGKKFPLPAAGAGPAPCYCLIGRIGVNGVPFYVGEKQSFVAQDSGELFLGINDFDVQDNTGQIEVVIETGGGVSPVAQRRRVAFDGP-SGRPIDGARVVVFYVDGLRPDVVHEMAAMGHLPNIKDLFLEGGSHLENSFTVFPSDTITSNGSLWTGMFSDRHGIKSQVGFNRKLKQSENYLGRFGPALTDLLLQPRGLDR 621
            GT+ +S + V   FPL A+  GPAPCYCLIGRIG N  PF++G K SFVA  SG L LGINDFDV DN G     +     + P+A  R V   G  +GRP+D A VVVFYVDGLRPDVV EM  +GHLPNI++ F++GG+ L N+FT FPSDTITSNG++WTG FSDRHG+K QV F+R+   SE+YL   GP+ +  LL PRG+DR
Sbjct:  101 GTYQFSDRAVESIFPLAASAKGPAPCYCLIGRIG-NSEPFFIGRKNSFVAPRSGRLQLGINDFDVTDNEGHFTATVAFEASLEPLAWERVVDRLGKWTGRPVDAASVVVFYVDGLRPDVVQEMVRLGHLPNIREQFIDGGTWLSNTFTAFPSDTITSNGTMWTGCFSDRHGLKGQVRFSRRRLVSESYLEPLGPSRSARLLSPRGIDR 307          
BLAST of mRNA_M-pyrifera_M_contig106316.1367.1 vs. uniprot
Match: A0A3E0PV75_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0PV75_9BACT)

HSP 1 Score: 239 bits (609), Expect = 1.440e-69
Identity = 118/208 (56.73%), Postives = 148/208 (71.15%), Query Frame = 1
Query:    1 GTFHYSSKVVGKKFPLPAAGAGPAPCYCLIGRIGVNGVPFYVGEKQSFVAQDSGELFLGINDFDVQDNTGQIEVVIETGGGVSPVAQRRRVAFDGPSGRPIDGARVVVFYVDGLRPDVVHEMAAMGHLPNIKDLFLEGGSHLENSFTVFPSDTITSNGSLWTGMFSDRHGIKSQVGFNRKLKQSENYLGRFGPALTDLLLQPRGLDRA 624
            GT+ +S +V  + FPLPAAG GPAPCY LIGRIG  G PF+VG  +S+ A   GEL+LG+NDFDV DN+G     IE  G   PV   R ++ +   G P +   VVVFY+DGLRPDVV EMAA+GHLPNI+  FL GG+ L N+FT FPSDTITSNG++WTG FSDRHG+K QVGF+R+ ++S +YL  FGP  +   L P+G+D A
Sbjct:  162 GTYLFSHRVADRVFPLPAAGGGPAPCYGLIGRIG-QGEPFFVGSSRSWAADRDGELWLGVNDFDVSDNSGAFHAKIERSGSPRPVFSERVISRNEIGGVPAENCSVVVFYIDGLRPDVVREMAALGHLPNIERQFLRGGTWLSNAFTAFPSDTITSNGTMWTGCFSDRHGMKGQVGFSRRRQKSISYLDPFGPQRSAQWLSPQGIDGA 368          
BLAST of mRNA_M-pyrifera_M_contig106316.1367.1 vs. uniprot
Match: A0A518CQF8_9PLAN (Type I phosphodiesterase / nucleotide pyrophosphatase n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CQF8_9PLAN)

HSP 1 Score: 238 bits (607), Expect = 3.590e-69
Identity = 120/208 (57.69%), Postives = 146/208 (70.19%), Query Frame = 1
Query:    1 GTFHYSSKVVGKKFPLPAAGAGPAPCYCLIGRIGVNGVPFYVGEKQSFVAQDSGELFLGINDFDVQDNTGQIEVVIETGGGVSPVAQRRRVAFDGPSGRPIDGARVVVFYVDGLRPDVVHEMAAMGHLPNIKDLFLEGGSHLENSFTVFPSDTITSNGSLWTGMFSDRHGIKSQVGFNRKLKQSENYLGRFGPALTDLLLQPRGLDRA 624
            GT+HYS KVV + FP+P+A  GPAP Y LIGRIG NG PFYVG ++SF A  SG LFLGIND+D  DN G   V I  GG + P  Q   V      GRP+  ++V+VFY+DGLRPDVV EM AMGHLPNI  LF+ GG+ +  + T FPSDTITSNG++WTG FSDRHG+K QV F+R    SE+YL   GP+ +  LL+P+GLD A
Sbjct:  127 GTYHYSEKVVDEFFPIPSATRGPAPPYALIGRIG-NGAPFYVGSQKSFYAPASGPLFLGINDYDCSDNKGFFSVTITRGGYLEPFKQEEVVTAAAVPGRPVPNSQVMVFYIDGLRPDVVREMVAMGHLPNINRLFVSGGTWMSRNCTAFPSDTITSNGTMWTGCFSDRHGLKGQVRFSRLKLVSESYLEPLGPSRSARLLKPQGLDGA 333          
BLAST of mRNA_M-pyrifera_M_contig106316.1367.1 vs. uniprot
Match: A0A353ZDQ1_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A353ZDQ1_9PLAN)

HSP 1 Score: 231 bits (590), Expect = 4.690e-67
Identity = 116/207 (56.04%), Postives = 144/207 (69.57%), Query Frame = 1
Query:    1 GTFHYSSKVVGKKFPLPAAGAGPAPCYCLIGRIGVNGVPFYVGEKQSFVAQDSGELFLGINDFDVQDNTGQIEVVIETGGGVSPVAQRRRVAFDGPSGRPIDGARVVVFYVDGLRPDVVHEMAAMGHLPNIKDLFLEGGSHLENSFTVFPSDTITSNGSLWTGMFSDRHGIKSQVGFNRKLKQSENYLGRFGPALTDLLLQPRGLDR 621
            GTF YS+ + G++FPLPAAGAGPAPC+CLI RIG +G PF+VG   S  A  SG L LGINDFD   N GQ  V +     V P+  R  +      G P+ G  VVVFYVDGLRPDVV EMAAMGH+P+++  F+EGG+HL N+FT FPSDTITSNG++WTG FSDRHG+K QV F+R  + S+++L   GP  +   L  RG+DR
Sbjct:  109 GTFLYSNDLQGREFPLPAAGAGPAPCFCLIARIG-SGTPFFVGRACSLTAPASGRLQLGINDFDPFGNLGQFAVEVSLPQEVQPLQHRLHIPAGTEGGGPVPGCDVVVFYVDGLRPDVVEEMAAMGHVPHLRRHFVEGGTHLSNAFTAFPSDTITSNGTMWTGCFSDRHGLKGQVRFSRHRRNSDSFLEPMGPGRSSRQLGLRGVDR 314          
BLAST of mRNA_M-pyrifera_M_contig106316.1367.1 vs. uniprot
Match: A0A2E0SI75_9PLAN (Uncharacterized protein n=1 Tax=Planctomyces sp. TaxID=37635 RepID=A0A2E0SI75_9PLAN)

HSP 1 Score: 231 bits (590), Expect = 7.060e-67
Identity = 115/208 (55.29%), Postives = 147/208 (70.67%), Query Frame = 1
Query:    1 GTFHYSSKVVGKKFPLPAAGAGPAPCYCLIGRIGVNGVPFYVGEKQSFVAQDSGELFLGINDFDVQDNTGQIEVVIETGGGVSPVAQRRRVAFDGPSGRPIDGARVVVFYVDGLRPDVVHEMAAMGHLPNIKDLFLEGGSHLENSFTVFPSDTITSNGSLWTGMFSDRHGIKSQVGFNRKLKQSENYLGRFGPALTDLLLQPRGLDRA 624
            GT+HY+ KV+ + FPLP+A  GPAP Y L+ RIG N  PFYVG ++SF A  SG L  GINDF+  DN G   V I+ GG + P  Q + V    P+GR I  ++V+VFY+DGLRPDVV EM AMGHLPNI +LF+ GG+ +  + T FPSDTITSNG++WTG FSDRHG+K QV F+R+   SE+YL   GP+ +  LL+P+GLD A
Sbjct:  111 GTYHYAEKVIDEHFPLPSASRGPAPPYSLMARIG-NSEPFYVGPRKSFYASASGPLVFGINDFNCADNKGHFVVNIKRGGYLEPFKQEQVVTAAAPAGRAIPDSQVMVFYIDGLRPDVVREMVAMGHLPNINELFVSGGTWMSRNCTAFPSDTITSNGTMWTGCFSDRHGLKGQVRFSRRKLISESYLEPLGPSRSARLLEPQGLDGA 317          
BLAST of mRNA_M-pyrifera_M_contig106316.1367.1 vs. uniprot
Match: A0A2E7D313_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D313_9PLAN)

HSP 1 Score: 225 bits (573), Expect = 1.660e-64
Identity = 107/206 (51.94%), Postives = 148/206 (71.84%), Query Frame = 1
Query:    1 GTFHYSSKVVGKKFPLPAAGAGPAPCYCLIGRIGVNGVPFYVGEKQSFVAQDSGELFLGINDFDVQDNTGQIEVVIETGGGVSPVAQRRRVAFDGPSGRPIDGARVVVFYVDGLRPDVVHEMAAMGHLPNIKDLFLEGGSHLENSFTVFPSDTITSNGSLWTGMFSDRHGIKSQVGFNRKLKQSENYLGRFGPALTDLLLQPRGLD 618
            GT+  ++ +  ++FP+ +   GPAPC+ LIG+IG +  PF++G  +S+ A  SG L LGINDFDV+ N+G+    +     V P+A  R +      G+ IDGA VVVFY+DGLRPDVV EMAAMGH+PNIK+LFL+GG+ + N+FT FPSDTITSNG++WTG FSDRHG+K+QV F+R+  +S++YL   GP+ +  LL+P G D
Sbjct:  210 GTYFVNTAIADQRFPMSSGSHGPAPCFALIGKIG-DSEPFFIGRGKSWEATHSGRLVLGINDFDVELNSGEFTAEVSQPRSVQPIAHERVIDEADELGQAIDGASVVVFYIDGLRPDVVREMAAMGHIPNIKELFLDGGTWMSNAFTAFPSDTITSNGTMWTGCFSDRHGLKAQVRFSRRALKSKSYLDPLGPSRSSRLLKPSGAD 414          
BLAST of mRNA_M-pyrifera_M_contig106316.1367.1 vs. uniprot
Match: UPI0019972BE2 (Alkaline phosphatase family protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI0019972BE2)

HSP 1 Score: 224 bits (570), Expect = 3.390e-64
Identity = 107/208 (51.44%), Postives = 141/208 (67.79%), Query Frame = 1
Query:    1 GTFHYSSKVVGKKFPLPAAGAGPAPCYCLIGRIGVNGVPFYVGEKQSFVAQDSGELFLGINDFDVQDNTGQIEVVIETGGGVSPVAQRRRVAFDGPSGRPIDGARVVVFYVDGLRPDVVHEMAAMGHLPNIKDLFLEGGSHLENSFTVFPSDTITSNGSLWTGMFSDRHGIKSQVGFNRKLKQSENYLGRFGPALTDLLLQPRGLDRA 624
            GTF     +  ++FPLP+   GPAPC+CL+GRIG NG PF+VG+ +S+ A +SG L L +NDFD  D+ G     +     V P++    V  +  SG P+   +VV+FY DGLRPDVV EMA MGHLPNI+ LFLE G  + N +T FPSDTIT+NG++WTG FSDRHG+K QV F+R+   S++YL   GP+ +  LL P+GLDRA
Sbjct:   96 GTFMVHDGIQDQRFPLPSGSQGPAPCFCLMGRIGENGKPFFVGKSKSWQAANSGRLQLAVNDFDPSDSEGAFHAEVSRPKLVQPMSYEEVVPANSTSGTPLPNCQVVIFYADGLRPDVVREMATMGHLPNIQSLFLENGCWMSNCYTTFPSDTITANGTMWTGCFSDRHGLKGQVRFSRQRLVSQSYLDPLGPSRSARLLSPQGLDRA 303          
BLAST of mRNA_M-pyrifera_M_contig106316.1367.1 vs. uniprot
Match: A0A5C9CTU1_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A5C9CTU1_9BACT)

HSP 1 Score: 221 bits (562), Expect = 4.150e-63
Identity = 109/207 (52.66%), Postives = 137/207 (66.18%), Query Frame = 1
Query:    1 GTFHYSSKVVGKKFPLPAAGAGPAPCYCLIGRIGVNGVPFYVGEKQSFVAQDSGELFLGINDFDVQDNTGQIEVVIETGGGVSPVAQRRRVAFDGPSGRPIDGARVVVFYVDGLRPDVVHEMAAMGHLPNIKDLFLEGGSHLENSFTVFPSDTITSNGSLWTGMFSDRHGIKSQVGFNRKLKQSENYLGRFGPALTDLLLQPRGLDR 621
            GTF     +  + FPLP+   GPAPC+CLIGRIG NG PF+VG+ +S+ A  +G L L +NDFD  D+ G     +     V P++    +     +G P+   + VVFYVDGLRPDVV EMAAMGHLPNI+ LFLE G  + N FT FPSDTITSNG++WTG FSDRHG+K QV F R+   SE+YL   GP+ +  LL P+GLDR
Sbjct:   79 GTFLVHDGIQDQNFPLPSGNHGPAPCFCLIGRIGENGKPFFVGKSKSWPASTNGRLQLAVNDFDPSDSEGAFHAQVSRPKLVQPMSYEEVIPATTETGSPLPKCQAVVFYVDGLRPDVVREMAAMGHLPNIQSLFLENGCWMSNCFTAFPSDTITSNGTMWTGCFSDRHGLKGQVRFCRQQLTSESYLDPLGPSRSARLLSPQGLDR 285          
BLAST of mRNA_M-pyrifera_M_contig106316.1367.1 vs. uniprot
Match: A0A3L7UN69_9BACT (Uncharacterized protein n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A3L7UN69_9BACT)

HSP 1 Score: 219 bits (558), Expect = 1.630e-62
Identity = 110/208 (52.88%), Postives = 137/208 (65.87%), Query Frame = 1
Query:    1 GTFHYSSKVVGKKFPLPAAGAGPAPCYCLIGRIGVNGVPFYVGEKQSFVAQDSGELFLGINDFDVQDNTGQIEVVIETGGGVSPVAQRRRVAFDGPSGRPIDGARVVVFYVDGLRPDVVHEMAAMGHLPNIKDLFLEGGSHLENSFTVFPSDTITSNGSLWTGMFSDRHGIKSQVGFNRKLKQSENYLGRFGPALTDLLLQPRGLDRA 624
            GTF     +  + FPL +   GPAPC+CLIGRIG +G PF+VG+ +S+ A  SG L L +NDFD  D+ G     I     V P++    V     SG P+   + VVFYVDGLRPDVV EMA MGHLPNIK LFL+ G  + N FT FPSDTITSNG++WTG FSDRHG+K QV F+R+   S++YL   GP+ +  LL P+GLDRA
Sbjct:  107 GTFLVHDGIQDQNFPLASGNHGPAPCFCLIGRIGDHGQPFFVGKSKSWPASASGRLQLAVNDFDPSDSEGAFHTQITRPKLVQPMSYEEVVPATDDSGSPLPNCQAVVFYVDGLRPDVVREMATMGHLPNIKSLFLDNGCWMSNCFTAFPSDTITSNGTMWTGCFSDRHGLKGQVRFSRQRLVSQSYLDPLGPSRSARLLSPQGLDRA 314          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106316.1367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517ZM64_9PLAN2.540e-7156.04Type I phosphodiesterase / nucleotide pyrophosphat... [more]
A0A517Z587_9PLAN7.490e-7057.69Type I phosphodiesterase / nucleotide pyrophosphat... [more]
A0A3E0PV75_9BACT1.440e-6956.73Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A518CQF8_9PLAN3.590e-6957.69Type I phosphodiesterase / nucleotide pyrophosphat... [more]
A0A353ZDQ1_9PLAN4.690e-6756.04Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A2E0SI75_9PLAN7.060e-6755.29Uncharacterized protein n=1 Tax=Planctomyces sp. T... [more]
A0A2E7D313_9PLAN1.660e-6451.94Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
UPI0019972BE23.390e-6451.44Alkaline phosphatase family protein n=1 Tax=Planct... [more]
A0A5C9CTU1_9BACT4.150e-6352.66Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A3L7UN69_9BACT1.630e-6252.88Uncharacterized protein n=2 Tax=Planctomycetes Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig106316contigM-pyrifera_M_contig106316:6..629 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size624
Cds size624
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815573.191427-CDS-M-pyrifera_M_contig106316:5..6291622815573.191427-CDS-M-pyrifera_M_contig106316:5..629Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig106316 6..629 +
1692277469.7759993-CDS-M-pyrifera_M_contig106316:5..6291692277469.7759993-CDS-M-pyrifera_M_contig106316:5..629Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig106316 6..629 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig106316.1367.1prot_M-pyrifera_M_contig106316.1367.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig106316 6..629 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig106316.1367.1

>prot_M-pyrifera_M_contig106316.1367.1 ID=prot_M-pyrifera_M_contig106316.1367.1|Name=mRNA_M-pyrifera_M_contig106316.1367.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=208bp
GTFHYSSKVVGKKFPLPAAGAGPAPCYCLIGRIGVNGVPFYVGEKQSFVA
QDSGELFLGINDFDVQDNTGQIEVVIETGGGVSPVAQRRRVAFDGPSGRP
IDGARVVVFYVDGLRPDVVHEMAAMGHLPNIKDLFLEGGSHLENSFTVFP
SDTITSNGSLWTGMFSDRHGIKSQVGFNRKLKQSENYLGRFGPALTDLLL
QPRGLDRA
back to top

mRNA from alignment at M-pyrifera_M_contig106316:6..629+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig106316.1367.1 ID=mRNA_M-pyrifera_M_contig106316.1367.1|Name=mRNA_M-pyrifera_M_contig106316.1367.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig106316:6..629+ (Macrocystis pyrifera P11B4 male)
GGGACGTTTCACTATTCGTCCAAAGTTGTCGGCAAGAAGTTTCCCCTGCC TGCTGCTGGGGCCGGTCCCGCGCCGTGTTACTGCCTGATTGGGCGAATCG GTGTGAATGGCGTGCCGTTCTACGTCGGCGAGAAACAGAGTTTTGTCGCT CAGGACAGTGGTGAACTGTTCCTCGGGATCAACGATTTTGATGTCCAGGA TAACACTGGCCAGATCGAGGTGGTGATCGAGACCGGTGGCGGGGTGTCTC CTGTTGCTCAGCGTCGTCGAGTTGCCTTTGACGGCCCCTCCGGTCGACCA ATCGATGGTGCCCGAGTCGTTGTGTTCTATGTGGATGGCCTGCGACCCGA CGTCGTTCATGAGATGGCTGCGATGGGACACTTGCCCAACATCAAGGACT TGTTTTTGGAGGGGGGCAGCCATCTGGAGAACTCCTTCACCGTTTTTCCC TCCGACACGATCACCTCGAATGGGAGTCTCTGGACAGGCATGTTCAGCGA CCGGCACGGCATCAAGTCGCAGGTCGGCTTTAATCGAAAGTTAAAGCAAA GCGAAAACTACCTGGGCCGATTCGGCCCGGCACTCACCGATCTGCTCCTG CAGCCCAGGGGATTGGACCGTGCT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig106316:6..629+

>mRNA_M-pyrifera_M_contig106316.1367.1 ID=mRNA_M-pyrifera_M_contig106316.1367.1|Name=mRNA_M-pyrifera_M_contig106316.1367.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1248bp|location=Sequence derived from alignment at M-pyrifera_M_contig106316:6..629+ (Macrocystis pyrifera P11B4 male)
GGGACGTTTCACTATTCGTCCAAAGTTGTCGGCAAGAAGTTTCCCCTGCC
TGCTGCTGGGGCCGGTCCCGCGCCGTGTTACTGCCTGATTGGGCGAATCG
GTGTGAATGGCGTGCCGTTCTACGTCGGCGAGAAACAGAGTTTTGTCGCT
CAGGACAGTGGTGAACTGTTCCTCGGGATCAACGATTTTGATGTCCAGGA
TAACACTGGCCAGATCGAGGTGGTGATCGAGACCGGTGGCGGGGTGTCTC
CTGTTGCTCAGCGTCGTCGAGTTGCCTTTGACGGCCCCTCCGGTCGACCA
ATCGATGGTGCCCGAGTCGTTGTGTTCTATGTGGATGGCCTGCGACCCGA
CGTCGTTCATGAGATGGCTGCGATGGGACACTTGCCCAACATCAAGGACT
TGTTTTTGGAGGGGGGCAGCCATCTGGAGAACTCCTTCACCGTTTTTCCC
TCCGACACGATCACCTCGAATGGGAGTCTCTGGACAGGCATGTTCAGCGA
CCGGCACGGCATCAAGTCGCAGGTCGGCTTTAATCGAAAGTTAAAGCAAA
GCGAAAACTACCTGGGCCGATTCGGCCCGGCACTCACCGATCTGCTCCTG
CAGCCCAGGGGATTGGACCGTGCTGGGACGTTTCACTATTCGTCCAAAGT
TGTCGGCAAGAAGTTTCCCCTGCCTGCTGCTGGGGCCGGTCCCGCGCCGT
GTTACTGCCTGATTGGGCGAATCGGTGTGAATGGCGTGCCGTTCTACGTC
GGCGAGAAACAGAGTTTTGTCGCTCAGGACAGTGGTGAACTGTTCCTCGG
GATCAACGATTTTGATGTCCAGGATAACACTGGCCAGATCGAGGTGGTGA
TCGAGACCGGTGGCGGGGTGTCTCCTGTTGCTCAGCGTCGTCGAGTTGCC
TTTGACGGCCCCTCCGGTCGACCAATCGATGGTGCCCGAGTCGTTGTGTT
CTATGTGGATGGCCTGCGACCCGACGTCGTTCATGAGATGGCTGCGATGG
GACACTTGCCCAACATCAAGGACTTGTTTTTGGAGGGGGGCAGCCATCTG
GAGAACTCCTTCACCGTTTTTCCCTCCGACACGATCACCTCGAATGGGAG
TCTCTGGACAGGCATGTTCAGCGACCGGCACGGCATCAAGTCGCAGGTCG
GCTTTAATCGAAAGTTAAAGCAAAGCGAAAACTACCTGGGCCGATTCGGC
CCGGCACTCACCGATCTGCTCCTGCAGCCCAGGGGATTGGACCGTGCT
back to top