mRNA_M-pyrifera_M_contig106206.1345.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106206.1345.1 vs. uniprot
Match: A0A8J4CNU5_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CNU5_9CHLO) HSP 1 Score: 76.6 bits (187), Expect = 2.220e-13 Identity = 58/180 (32.22%), Postives = 81/180 (45.00%), Query Frame = 1 Query: 1 MQKAVRRRKTDAAKRAAAEICRGGVEGVIKVARRFPIMCLEDAVLHPGVFFAVWMMGAAGSHPTSPFTAWTPSSAHVSVLLDMVGELASSAIHDPIPHDIAPLKDFDATSTSLPAFA--------------------------LFIRAEFGGMRGDIEMLRRGASLWDQRCK-SLQPPPP 459 +QKAVR + A RAA + + G ++ RR I+C+EDA+LHPG+ F VW+M A + H+ LL +V +LA + D +P P D D+ + +P A L RA +GGM GD+ M+R A W R K S PPPP Sbjct: 380 LQKAVRLGRGSCAVRAALHLFKED-GGAAQLLRRLSIVCVEDAILHPGLPFVVWLMAAQAK-------GFVLGRTHLDALLCLVYQLAMVQVRDGLPD---PWNDGDSATVGIPVDATSQGPATLQQVDELALPAAETCLLKCLLFRASYGGMGGDVRMMRAFAGYWAARFKGSAAPPPP 548
BLAST of mRNA_M-pyrifera_M_contig106206.1345.1 vs. uniprot
Match: A0A8J4CU81_9CHLO (Uncharacterized protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CU81_9CHLO) HSP 1 Score: 76.6 bits (187), Expect = 2.250e-13 Identity = 58/180 (32.22%), Postives = 81/180 (45.00%), Query Frame = 1 Query: 1 MQKAVRRRKTDAAKRAAAEICRGGVEGVIKVARRFPIMCLEDAVLHPGVFFAVWMMGAAGSHPTSPFTAWTPSSAHVSVLLDMVGELASSAIHDPIPHDIAPLKDFDATSTSLPAFA--------------------------LFIRAEFGGMRGDIEMLRRGASLWDQRCK-SLQPPPP 459 +QKAVR + A RAA + + G ++ RR I+C+EDA+LHPG+ F VW+M A + H+ LL +V +LA + D +P P D D+ + +P A L RA +GGM GD+ M+R A W R K S PPPP Sbjct: 380 LQKAVRLGRGSCAVRAALHLFKED-GGAAQLLRRLSIVCVEDAILHPGLPFVVWLMAAQAK-------GFVLGRTHLDALLCLVYQLAMVQVRDGLPD---PWNDGDSATVGIPVDATSQGPATLQQVDELALPAAETCLLKCLLFRASYGGMGGDVRMMRAFAGYWAARFKGSAAPPPP 548
BLAST of mRNA_M-pyrifera_M_contig106206.1345.1 vs. uniprot
Match: A0A8J4B716_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B716_9CHLO) HSP 1 Score: 72.4 bits (176), Expect = 6.380e-12 Identity = 59/176 (33.52%), Postives = 82/176 (46.59%), Query Frame = 1 Query: 1 MQKAVRRRKTDAAKRAAAEICRGGVEGVIKVARRFPIMCLEDAVLHPGVFFAVWMMGAAGSHPTSPFTAWTPSSAHVSVLLDMVGELASSAIHDPIPH-----DIAPL-KDFDATST-----------SLPAF------ALFIRAEFGGMRGDIEMLRRGASLWDQRCKSLQPPPP 459 +QKAVR + A RAA + + G ++ RR I+C+EDA+LHPG+ F VW+M A + H+ LL +V +LA + D +P D A + DATS +LPA L RA +GGM GD+ M++ A W R K PPP Sbjct: 28 LQKAVRLGRGSCAVRAALHLFKED-GGAAQLLRRLSIVCVEDAILHPGLPFVVWLMAAQAK-------GFVLGRTHLDALLCLVYQLAMVQVRDGLPDPWDGGDSATVGTPVDATSQGPVTLQQVDELALPAAETCLVKCLLFRASYGGMGGDVRMMKIFAGYWAARFKGSAAPPP 195
BLAST of mRNA_M-pyrifera_M_contig106206.1345.1 vs. uniprot
Match: A0A8J4B864_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B864_9CHLO) HSP 1 Score: 72.4 bits (176), Expect = 6.600e-12 Identity = 59/176 (33.52%), Postives = 82/176 (46.59%), Query Frame = 1 Query: 1 MQKAVRRRKTDAAKRAAAEICRGGVEGVIKVARRFPIMCLEDAVLHPGVFFAVWMMGAAGSHPTSPFTAWTPSSAHVSVLLDMVGELASSAIHDPIPH-----DIAPL-KDFDATST-----------SLPAF------ALFIRAEFGGMRGDIEMLRRGASLWDQRCKSLQPPPP 459 +QKAVR + A RAA + + G ++ RR I+C+EDA+LHPG+ F VW+M A + H+ LL +V +LA + D +P D A + DATS +LPA L RA +GGM GD+ M++ A W R K PPP Sbjct: 281 LQKAVRLGRGSCAVRAALHLFKED-GGAAQLLRRLSIVCVEDAILHPGLPFVVWLMAAQAK-------GFVLGRTHLDALLCLVYQLAMVQVRDGLPDPWDGGDSATVGTPVDATSQGPVTLQQVDELALPAAETCLVKCLLFRASYGGMGGDVRMMKIFAGYWAARFKGSAAPPP 448
BLAST of mRNA_M-pyrifera_M_contig106206.1345.1 vs. uniprot
Match: A0A6B2L588_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L588_9EUKA) HSP 1 Score: 72.0 bits (175), Expect = 7.200e-12 Identity = 49/156 (31.41%), Postives = 80/156 (51.28%), Query Frame = 1 Query: 1 MQKAVRRRKTDAAKRAAAEICRGGVEGVIKVARRFPIMCLEDAVLHPGVFFAVWMMGAAGSHPTSPFTAWTPSSAHVSVLLDMVGELASSAIHDPIPHDIAPLKDFDATSTSLPA----------FALFIRAEFGGMRGDIEMLRRGASLWDQRCK 438 +QK VRRRK ++A R ++ + ++ RR PI+ LED LH + VW+M A W S + V ++L ++ E+A + DPIP + P + F + P +L +R +GGM+GD+EML++ A +W++R K Sbjct: 50 LQKCVRRRKAESAVRVGWQLL---CQDPDQLLRRLPIIILEDGCLHRHFSYIVWLMVATSK-------GWKLSKSQVVLILRVIFEVAEVSWRDPIP--MVPTEGFKNPALDRPEGTLCPIAHVLASLVLRVNYGGMKGDMEMLKKFAIVWNERYK 193
BLAST of mRNA_M-pyrifera_M_contig106206.1345.1 vs. uniprot
Match: K0RE75_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RE75_THAOC) HSP 1 Score: 70.5 bits (171), Expect = 2.870e-11 Identity = 55/169 (32.54%), Postives = 81/169 (47.93%), Query Frame = 1 Query: 1 MQKAVRRRKTDAAKRAAAEICRGGVEGVIKVARRFPIMCLEDAVLHPGVFFAVWMMGAAGSHPTSPFTAWTPSSAHVSVLLDMVGELASSAIHDPIPHDIAPLKDFDATSTSLPAFAL----------------FIRAEFGGMRGDIEMLRRGASLWDQRCKSLQPPPP 459 +QK+ RRR + A R A E+ + I RR PI+ LED+ LHP VW+M A + PS ++ LL++V E+AS + D + DI D + S +LP+ AL +RA++GGM DI+M+ R A +W R + PP Sbjct: 282 LQKSTRRRSGEQAVRVAMELIDRAYDQFI---RRLPIIILEDSTLHPDFGLLVWLMIAESK-------GYVPSRQILNRLLEIVYEVASCPLKDFLNKDIDCSSDSFSLSLNLPSSALSPNEKPGEEEVVVRSMLLRAQYGGMSCDIDMMLRFARIWRNRFVDARSKPP 440
BLAST of mRNA_M-pyrifera_M_contig106206.1345.1 vs. uniprot
Match: A0A836BZZ6_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BZZ6_9CHLO) HSP 1 Score: 68.9 bits (167), Expect = 1.060e-10 Identity = 46/148 (31.08%), Postives = 64/148 (43.24%), Query Frame = 1 Query: 97 RRFPIMCLEDAVLHPGVFFAVWMMGAAGSHPTSPFTAWTPSSAHVSVLLDMVGELASSAIHDPIPHD---------------------IAPLKDFDATSTSLPAF------ALFIRAEFGGMRGDIEMLRRGASLWDQRCKSLQPPPP 459 RR ++C+EDAVLHPG+ VW+M A ++ AHV LL + +LA+ + D +PH APL + LP +L +RA GGM GD+ +LR A+ W R PPP Sbjct: 415 RRLSVVCVEDAVLHPGLPLVVWLMAAQAK-------GYSLGGAHVEALLGLTFQLAAVQVRDGLPHPWDGGDGAAPSAAGAGAAAQLLSAPLSLSAVDALRLPPAEAGLVKSLLLRAAHGGMAGDVRLLRGCAAYWAARFGGAAAPPP 555
BLAST of mRNA_M-pyrifera_M_contig106206.1345.1 vs. uniprot
Match: A0A8J2S8C4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8C4_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.060e-9 Identity = 51/145 (35.17%), Postives = 71/145 (48.97%), Query Frame = 1 Query: 1 MQKAVRRRKTDAAKRAAAEICRGGVE-------GVIKVARRFPIMCLEDAVLHPGVFFAVWMMGAAGSHPTSPFTAWTPSSAHVSVLLDMVGELASSAIHDPIPHDIAPLKDFDATSTSLPAFALFIRAEFGGMRGDIEMLRRGA 414 +QK VRR D A R+A E+ G+ G+ + RR P++ +ED+ P + AVW M A SP T + P++ V VL +LA+ D P P K + T AL IRA +GGM+GD+ MLR A Sbjct: 238 LQKCVRRGNVDLAVRSAHELA--GITFGPTDPAGIKMLVRRLPVIAVEDSAALPCIVPAVWYMMALSPTEKSPAT-YKPTAQDVLVLCACAAQLAAHGSRDRFP---PPRKGRNELPTDGVNLALLIRAAYGGMKGDVAMLRERA 376
BLAST of mRNA_M-pyrifera_M_contig106206.1345.1 vs. uniprot
Match: A0A250X4N5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X4N5_9CHLO) HSP 1 Score: 61.6 bits (148), Expect = 3.390e-8 Identity = 50/165 (30.30%), Postives = 76/165 (46.06%), Query Frame = 1 Query: 1 MQKAVRRRKTDAAKRAAAEICRGGVEGVIKVARRFPIMCLEDAVLHPGVFFAVWMMGAAGSHPTSPFTAWTPSSAHVSVLLDMVGELASSAIHDPIP---------------HDIAPLKDF--DATSTSLPAF-ALFIRAEFGGMRGDIEMLRRGASLWDQRCKS 441 +QK VR + A R A + + E ++ RR PI+CLEDA+LHP + VW+M A + S +L E+AS + D +P + I +++ DA+ + A+ +RA FGGM GD+ MLR + LW R +S Sbjct: 202 LQKCVRLGRASCAARCAMHLMK---EDPSQLLRRLPIICLEDAILHPRLAVIVWIMAAQAK-------GYVFGLMLASEILKFTYEIASVKVKDILPTIEDNMRISTNQDGENSILQMENSLGDASKDEITLLNAINLRASFGGMSGDVVMLRGYSKLWSSRFRS 356
BLAST of mRNA_M-pyrifera_M_contig106206.1345.1 vs. uniprot
Match: C1E065_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E065_MICCC) HSP 1 Score: 60.5 bits (145), Expect = 6.820e-8 Identity = 42/133 (31.58%), Postives = 61/133 (45.86%), Query Frame = 1 Query: 97 RRFPIMCLEDAVLHPGVFFAVWMMGAAGSHPTSPFTAWTPSSAHVSVLLDMVG-----------------ELA----SSAIHDPIPHDIAPLKDFDATSTSLPAFALFIRAEFGGMRGDIEMLRRGASLWDQR 432 RR PI+C+EDAVLHP + VW M A H F A V + ++ +LA +S DP+ + +D + ++ AL +RA+FGG+RGD+ MLR A W +R Sbjct: 20 RRLPIVCIEDAVLHPSLPLIVWFMAA---HSKGWFIPPEARGAAVRFIAEVAACPYKDRDLVAAIEADEEDLARRDTASGAADPLCNLAVATRDL-SNESACHVLALLVRAKFGGLRGDVGMLRGAAKAWRRR 148 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106206.1345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106206.1345.1 >prot_M-pyrifera_M_contig106206.1345.1 ID=prot_M-pyrifera_M_contig106206.1345.1|Name=mRNA_M-pyrifera_M_contig106206.1345.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp MQKAVRRRKTDAAKRAAAEICRGGVEGVIKVARRFPIMCLEDAVLHPGVFback to top mRNA from alignment at M-pyrifera_M_contig106206:2..460+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106206.1345.1 ID=mRNA_M-pyrifera_M_contig106206.1345.1|Name=mRNA_M-pyrifera_M_contig106206.1345.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=459bp|location=Sequence derived from alignment at M-pyrifera_M_contig106206:2..460+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106206:2..460+ >mRNA_M-pyrifera_M_contig106206.1345.1 ID=mRNA_M-pyrifera_M_contig106206.1345.1|Name=mRNA_M-pyrifera_M_contig106206.1345.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig106206:2..460+ (Macrocystis pyrifera P11B4 male)back to top |