mRNA_M-pyrifera_M_contig106193.1342.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106193.1342.1 vs. uniprot
Match: A0A8C0QJV8_CANLF (Immunoglobulin mu DNA binding protein 2 n=1 Tax=Canis lupus familiaris TaxID=9615 RepID=A0A8C0QJV8_CANLF) HSP 1 Score: 151 bits (381), Expect = 1.660e-39 Identity = 80/155 (51.61%), Postives = 110/155 (70.97%), Query Frame = 1 Query: 1 VIDTAGCELKEEVDDATGSRSNLGEAKLVRFMVQTLLSRGLESNEVAVITPYNAQVEKDEEGVG----QVEVRSVDGFQGREMEAIVLSFVRSNEDREVGFLSDKRRINVAVTRARRFVCIVADSSTVGRDLFIQTLLRHAEANGQVRSAEEFRD 453 ++DTAGC L E DD S+ N GE +LV +Q L+ G++++++AVITPYN QV+ + + ++E++SVDGFQGRE EA+VLSFVRSN EVGFL++ RRINVAVTRARR V +V DS TV F++TL+ H +G+VR+A E+ D Sbjct: 464 LVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQALVDAGVQASDIAVITPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVSNHAFLKTLVDHFTEHGEVRTAFEYLD 618
BLAST of mRNA_M-pyrifera_M_contig106193.1342.1 vs. uniprot
Match: UPI0018F2B5AF (DNA-binding protein SMUBP-2 isoform X7 n=2 Tax=Canis lupus TaxID=9612 RepID=UPI0018F2B5AF) HSP 1 Score: 151 bits (381), Expect = 1.670e-39 Identity = 80/155 (51.61%), Postives = 110/155 (70.97%), Query Frame = 1 Query: 1 VIDTAGCELKEEVDDATGSRSNLGEAKLVRFMVQTLLSRGLESNEVAVITPYNAQVEKDEEGVG----QVEVRSVDGFQGREMEAIVLSFVRSNEDREVGFLSDKRRINVAVTRARRFVCIVADSSTVGRDLFIQTLLRHAEANGQVRSAEEFRD 453 ++DTAGC L E DD S+ N GE +LV +Q L+ G++++++AVITPYN QV+ + + ++E++SVDGFQGRE EA+VLSFVRSN EVGFL++ RRINVAVTRARR V +V DS TV F++TL+ H +G+VR+A E+ D Sbjct: 487 LVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQALVDAGVQASDIAVITPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVSNHAFLKTLVDHFTEHGEVRTAFEYLD 641
BLAST of mRNA_M-pyrifera_M_contig106193.1342.1 vs. uniprot
Match: UPI0018F5E323 (DNA-binding protein SMUBP-2 isoform X6 n=1 Tax=Canis lupus familiaris TaxID=9615 RepID=UPI0018F5E323) HSP 1 Score: 151 bits (381), Expect = 1.670e-39 Identity = 80/155 (51.61%), Postives = 110/155 (70.97%), Query Frame = 1 Query: 1 VIDTAGCELKEEVDDATGSRSNLGEAKLVRFMVQTLLSRGLESNEVAVITPYNAQVEKDEEGVG----QVEVRSVDGFQGREMEAIVLSFVRSNEDREVGFLSDKRRINVAVTRARRFVCIVADSSTVGRDLFIQTLLRHAEANGQVRSAEEFRD 453 ++DTAGC L E DD S+ N GE +LV +Q L+ G++++++AVITPYN QV+ + + ++E++SVDGFQGRE EA+VLSFVRSN EVGFL++ RRINVAVTRARR V +V DS TV F++TL+ H +G+VR+A E+ D Sbjct: 489 LVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQALVDAGVQASDIAVITPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVSNHAFLKTLVDHFTEHGEVRTAFEYLD 643
BLAST of mRNA_M-pyrifera_M_contig106193.1342.1 vs. uniprot
Match: UPI0018F7D33F (LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2 isoform X1 n=1 Tax=Canis lupus familiaris TaxID=9615 RepID=UPI0018F7D33F) HSP 1 Score: 151 bits (381), Expect = 1.670e-39 Identity = 80/155 (51.61%), Postives = 110/155 (70.97%), Query Frame = 1 Query: 1 VIDTAGCELKEEVDDATGSRSNLGEAKLVRFMVQTLLSRGLESNEVAVITPYNAQVEKDEEGVG----QVEVRSVDGFQGREMEAIVLSFVRSNEDREVGFLSDKRRINVAVTRARRFVCIVADSSTVGRDLFIQTLLRHAEANGQVRSAEEFRD 453 ++DTAGC L E DD S+ N GE +LV +Q L+ G++++++AVITPYN QV+ + + ++E++SVDGFQGRE EA+VLSFVRSN EVGFL++ RRINVAVTRARR V +V DS TV F++TL+ H +G+VR+A E+ D Sbjct: 489 LVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQALVDAGVQASDIAVITPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVSNHAFLKTLVDHFTEHGEVRTAFEYLD 643
BLAST of mRNA_M-pyrifera_M_contig106193.1342.1 vs. uniprot
Match: T0R7F1_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R7F1_SAPDV) HSP 1 Score: 150 bits (378), Expect = 2.260e-39 Identity = 82/159 (51.57%), Postives = 112/159 (70.44%), Query Frame = 1 Query: 1 VIDTAGCELKEEVDDATG------SRSNLGEAKLVRFMVQTLLSRGLESNEVAVITPYNAQVEKDEE----GVGQVEVRSVDGFQGREMEAIVLSFVRSNEDREVGFLSDKRRINVAVTRARRFVCIVADSSTVGRDLFIQTLLRHAEANGQVRSAEEF 447 ++DTAGC L E+VDDA S+SN GEA +V V LL+ GL +E+AVITPYNAQV+ + + +E+RSVDGFQG E EA+V+S VRSN ++VGFL+D RR+NVA+TRA+R V +V D+ T+G+ F+ L+ H EA+G+ RSAEE+ Sbjct: 489 LLDTAGCGLDEDVDDAPTHEALRISKSNAGEADVVAAHVHALLNIGLRPDEIAVITPYNAQVQLLKRLLLPTLPTLEIRSVDGFQGCEKEAVVMSLVRSNAKKQVGFLADDRRMNVAITRAKRHVALVCDTDTIGKHPFLHALMEHFEAHGEYRSAEEY 647
BLAST of mRNA_M-pyrifera_M_contig106193.1342.1 vs. uniprot
Match: A0A287CWD9_ICTTR (Immunoglobulin mu DNA binding protein 2 n=3 Tax=Marmotini TaxID=337730 RepID=A0A287CWD9_ICTTR) HSP 1 Score: 150 bits (380), Expect = 2.290e-39 Identity = 82/155 (52.90%), Postives = 108/155 (69.68%), Query Frame = 1 Query: 1 VIDTAGCELKEEVDDATGSRSNLGEAKLVRFMVQTLLSRGLESNEVAVITPYNAQVEKDEEGVG----QVEVRSVDGFQGREMEAIVLSFVRSNEDREVGFLSDKRRINVAVTRARRFVCIVADSSTVGRDLFIQTLLRHAEANGQVRSAEEFRD 453 ++DTAGC L E DD SR N GE +LV VQ L+ G+++ ++AVITPYN QV+ + + ++E+RSVDGFQGRE EA+VLS VRSN EVGFL++ RRINVAVTRARR V +V DS TV F++TL+ H +G+VR+A E+ D Sbjct: 490 LVDTAGCGLLELEDDDEQSRGNPGEVRLVTLHVQALVDAGVQAGDIAVITPYNLQVDLLRQSLAPRHPELEIRSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVHNHAFLKTLVDHFTEHGEVRTAFEYLD 644
BLAST of mRNA_M-pyrifera_M_contig106193.1342.1 vs. uniprot
Match: A0A8J6AR89_GALPY (DNA-binding protein SMUBP-2 n=1 Tax=Galemys pyrenaicus TaxID=202257 RepID=A0A8J6AR89_GALPY) HSP 1 Score: 150 bits (380), Expect = 2.290e-39 Identity = 83/155 (53.55%), Postives = 108/155 (69.68%), Query Frame = 1 Query: 1 VIDTAGCELKEEVDDATGSRSNLGEAKLVRFMVQTLLSRGLESNEVAVITPYNAQVEKDEEGVG----QVEVRSVDGFQGREMEAIVLSFVRSNEDREVGFLSDKRRINVAVTRARRFVCIVADSSTVGRDLFIQTLLRHAEANGQVRSAEEFRD 453 ++DTAGC L E + S+ N GE +LV VQ L+ G+ + +VAVITPYN QV+ + + ++E+RSVDGFQGRE EA+VLSFVRSN EVGFL++ RRINVAVTRARR V +V DS TVG F++TLL H +G+VR+A E+ D Sbjct: 577 LVDTAGCGLFEMDQEDEQSKGNPGEVRLVSLHVQALVDAGVPARDVAVITPYNLQVDLLRQSLAHRHPELEIRSVDGFQGREKEAVVLSFVRSNRRGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVGSHAFLRTLLDHIAQHGEVRTAFEYLD 731
BLAST of mRNA_M-pyrifera_M_contig106193.1342.1 vs. uniprot
Match: A0A7S1TVD2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVD2_9STRA) HSP 1 Score: 142 bits (358), Expect = 2.960e-39 Identity = 78/162 (48.15%), Postives = 105/162 (64.81%), Query Frame = 1 Query: 4 IDTAGCELKEEVDDATGSRSNLGEAKLVRFMVQTLLSRGLESNEVAVITPYNAQVE--KDEE----------GVGQVEVRSVDGFQGREMEAIVLSFVRSNEDREVGFLSDKRRINVAVTRARRFVCIVADSSTVGRDLFIQTLLRHAEANGQVRSAEEFRD 453 +DTAGC E+V GS SN E ++ V LL RGL + +V +ITPYN QVE ++E G+ +V++RSVDGFQG E EA+VLS VRSNE R VGFL+D RR+NVA+TRA+R +C+V DS T+ D F++ + + E NG V+SA + D Sbjct: 42 LDTAGCGFDEQVV-GEGSHSNEAEGRVAMAHVAALLRRGLTAEQVCIITPYNGQVEFLREERSRLAAALPLPGLAKVDIRSVDGFQGGEREAVVLSLVRSNESRTVGFLADNRRLNVAITRAKRHLCVVGDSETISSDKFLKGIFEYVEENGDVQSAMAYAD 202
BLAST of mRNA_M-pyrifera_M_contig106193.1342.1 vs. uniprot
Match: F6WKD5_CIOIN (R3H domain-containing protein n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6WKD5_CIOIN) HSP 1 Score: 150 bits (379), Expect = 3.110e-39 Identity = 75/153 (49.02%), Postives = 113/153 (73.86%), Query Frame = 1 Query: 1 VIDTAGCELKEEVDDATGSRSNLGEAKLVRFMVQTLLSRGLESNEVAVITPYNAQVEKDEEGVGQ----VEVRSVDGFQGREMEAIVLSFVRSNEDREVGFLSDKRRINVAVTRARRFVCIVADSSTVGRDLFIQTLLRHAEANGQVRSAEEF 447 ++DTAGCE+ E + + S++N GEA +V VQTL+ G++ +++A+I+PYN QV+ + + + +E++SVDGFQGRE EA++L+ VRSN DRE+GFLSDKRR+NVAVTRARR + +V DS+TV D FI++L+ H +G +R+ E+ Sbjct: 494 LVDTAGCEMYESESEESISKANTGEAMIVCSHVQTLVKAGVKESDIAIISPYNLQVDLLRQSLKEKHPNIEIKSVDGFQGREKEAVILTLVRSNLDREIGFLSDKRRLNVAVTRARRHLAVVCDSTTVCSDNFIKSLIDHITEHGDIRTGFEY 646
BLAST of mRNA_M-pyrifera_M_contig106193.1342.1 vs. uniprot
Match: UPI001884B730 (DNA-binding protein SMUBP-2-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884B730) HSP 1 Score: 143 bits (360), Expect = 3.540e-39 Identity = 77/154 (50.00%), Postives = 111/154 (72.08%), Query Frame = 1 Query: 1 VIDTAGCELKEEVDDATGSRSNLGEAKLVRFMVQTLLSRGLESNEVAVITPYNAQVEKDEEGVGQ----VEVRSVDGFQGREMEAIVLSFVRSNEDREVGFLSDKRRINVAVTRARRFVCIVADSSTVGRDLFIQTLLRHAEANGQVRSAEEFR 450 +IDTAGC L+E D +TGS +N GEA +V + LL GLE+ E+ +I+PY Q++ + + Q V V +VDGFQGRE EA++LS VRSN+ R+VGFL+++RRINVAVTRARR + +V D++TV D+F+ +L+ H +G+VRSA ++R Sbjct: 133 LIDTAGCRLEETSDSSTGSCANQGEADIVVAHARALLRAGLEAGELCIISPYKRQLDLVDARLRQLKLGVAVGTVDGFQGREKEAVLLSLVRSNQRRKVGFLAERRRINVAVTRARRQLFVVCDTATVRADVFLASLVDHMVKHGEVRSANDYR 286 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106193.1342.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106193.1342.1 >prot_M-pyrifera_M_contig106193.1342.1 ID=prot_M-pyrifera_M_contig106193.1342.1|Name=mRNA_M-pyrifera_M_contig106193.1342.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp VIDTAGCELKEEVDDATGSRSNLGEAKLVRFMVQTLLSRGLESNEVAVITback to top mRNA from alignment at M-pyrifera_M_contig106193:3..521+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106193.1342.1 ID=mRNA_M-pyrifera_M_contig106193.1342.1|Name=mRNA_M-pyrifera_M_contig106193.1342.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=519bp|location=Sequence derived from alignment at M-pyrifera_M_contig106193:3..521+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106193:3..521+ >mRNA_M-pyrifera_M_contig106193.1342.1 ID=mRNA_M-pyrifera_M_contig106193.1342.1|Name=mRNA_M-pyrifera_M_contig106193.1342.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=906bp|location=Sequence derived from alignment at M-pyrifera_M_contig106193:3..521+ (Macrocystis pyrifera P11B4 male)back to top |