mRNA_M-pyrifera_M_contig106148.1334.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106148.1334.1 vs. uniprot
Match: A0A6B2L9E9_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L9E9_9EUKA) HSP 1 Score: 104 bits (259), Expect = 3.720e-25 Identity = 46/72 (63.89%), Postives = 55/72 (76.39%), Query Frame = 1 Query: 1 VVYSAYVLHRSPKFWGDDAEEFRPERWEEEGLIKHPYQYVPFQKGPRICLGMDMAYLEASLVLVRILCSGYR 216 V+YS Y LHR ++WG+DAEEF+PERWE+E L KHPYQYVPFQKGPRICLGM MA EA + I G++ Sbjct: 236 VMYSPYTLHRLKEYWGEDAEEFKPERWEKEDLFKHPYQYVPFQKGPRICLGMKMAIEEAKTCISIIYQHGFK 307
BLAST of mRNA_M-pyrifera_M_contig106148.1334.1 vs. uniprot
Match: A0A6B2L626_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L626_9EUKA) HSP 1 Score: 104 bits (259), Expect = 6.950e-25 Identity = 43/75 (57.33%), Postives = 60/75 (80.00%), Query Frame = 1 Query: 1 VVYSAYVLHRSPKFWGDDAEEFRPERWEEEGLIKHPYQYVPFQKGPRICLGMDMAYLEASLVLVRILCSGYRLRI 225 V YS +V+HR +FWG+DA+EF+PERWE++ ++KHPYQ+VPFQKGPR CLGM+MAY EA + + SG+R ++ Sbjct: 287 VSYSPFVVHRLKEFWGEDADEFKPERWEDKDILKHPYQFVPFQKGPRQCLGMNMAYEEAKCCIAILYQSGFRFKL 361
BLAST of mRNA_M-pyrifera_M_contig106148.1334.1 vs. uniprot
Match: A0A6B2L8Q9_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L8Q9_9EUKA) HSP 1 Score: 103 bits (257), Expect = 8.480e-25 Identity = 43/75 (57.33%), Postives = 59/75 (78.67%), Query Frame = 1 Query: 1 VVYSAYVLHRSPKFWGDDAEEFRPERWEEEGLIKHPYQYVPFQKGPRICLGMDMAYLEASLVLVRILCSGYRLRI 225 V+YS Y LHR ++WG+DA+ FRPERWE++ ++KHPYQ+VPFQKGPR CLGM+MAY EA + + SG+R ++ Sbjct: 236 VMYSPYTLHRLKEYWGEDADVFRPERWEDKEILKHPYQFVPFQKGPRQCLGMNMAYEEAKCCIAILYQSGFRFKL 310
BLAST of mRNA_M-pyrifera_M_contig106148.1334.1 vs. uniprot
Match: A0A6B2LJ31_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LJ31_9EUKA) HSP 1 Score: 99.8 bits (247), Expect = 1.370e-24 Identity = 41/75 (54.67%), Postives = 59/75 (78.67%), Query Frame = 1 Query: 1 VVYSAYVLHRSPKFWGDDAEEFRPERWEEEGLIKHPYQYVPFQKGPRICLGMDMAYLEASLVLVRILCSGYRLRI 225 V YS +V+HR ++WG+DA+ FRPERWE++ ++KHPYQ+VPFQKGPR CLGM+MAY EA + + +G+R ++ Sbjct: 93 VGYSPFVVHRLKEYWGEDADVFRPERWEDKEILKHPYQFVPFQKGPRQCLGMNMAYEEAKCCIAILYQNGFRFKL 167
BLAST of mRNA_M-pyrifera_M_contig106148.1334.1 vs. uniprot
Match: A0A6B2L2V8_9EUKA (Uncharacterized protein n=4 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L2V8_9EUKA) HSP 1 Score: 103 bits (258), Expect = 1.980e-24 Identity = 43/75 (57.33%), Postives = 60/75 (80.00%), Query Frame = 1 Query: 1 VVYSAYVLHRSPKFWGDDAEEFRPERWEEEGLIKHPYQYVPFQKGPRICLGMDMAYLEASLVLVRILCSGYRLRI 225 V YS +V+HR +FWG+DA+EF+PERWE++ ++KHPYQ+VPFQKGPR CLGM+MAY EA + + SG+R ++ Sbjct: 373 VGYSPFVVHRLKEFWGEDADEFKPERWEDKDILKHPYQFVPFQKGPRQCLGMNMAYEEAKCCIAILYQSGFRFKL 447
BLAST of mRNA_M-pyrifera_M_contig106148.1334.1 vs. uniprot
Match: A0A6B2LEH0_9EUKA (Uncharacterized protein n=2 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LEH0_9EUKA) HSP 1 Score: 100 bits (250), Expect = 2.090e-24 Identity = 42/75 (56.00%), Postives = 59/75 (78.67%), Query Frame = 1 Query: 1 VVYSAYVLHRSPKFWGDDAEEFRPERWEEEGLIKHPYQYVPFQKGPRICLGMDMAYLEASLVLVRILCSGYRLRI 225 V YS +V+HR ++WG+DA+ FRPERWE++ ++KHPYQ+VPFQKGPR CLGM+MAY EA + + SG+R ++ Sbjct: 147 VGYSPFVVHRLKEYWGEDADVFRPERWEDKEILKHPYQFVPFQKGPRQCLGMNMAYEEAKCCIAILYQSGFRFKL 221
BLAST of mRNA_M-pyrifera_M_contig106148.1334.1 vs. uniprot
Match: A0A6B2LEY4_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LEY4_9EUKA) HSP 1 Score: 100 bits (248), Expect = 3.210e-24 Identity = 40/75 (53.33%), Postives = 59/75 (78.67%), Query Frame = 1 Query: 1 VVYSAYVLHRSPKFWGDDAEEFRPERWEEEGLIKHPYQYVPFQKGPRICLGMDMAYLEASLVLVRILCSGYRLRI 225 + YS +V+HR ++WG+DA+ F+PERWE++ ++KHPYQ+VPFQKGPR CLGM+MAY EA + + SG+R ++ Sbjct: 147 ISYSPFVVHRLKEYWGEDADVFKPERWEDKDILKHPYQFVPFQKGPRQCLGMNMAYEEAKCCIAILYQSGFRFKL 221
BLAST of mRNA_M-pyrifera_M_contig106148.1334.1 vs. uniprot
Match: A0A6B2L3D7_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L3D7_9EUKA) HSP 1 Score: 102 bits (254), Expect = 6.930e-24 Identity = 41/60 (68.33%), Postives = 52/60 (86.67%), Query Frame = 1 Query: 1 VVYSAYVLHRSPKFWGDDAEEFRPERWEEEGLIKHPYQYVPFQKGPRICLGMDMAYLEAS 180 ++YS Y +HR ++WGDDAEEF+PERWE++ ++KHPYQYVPFQKGPRICLGM+MA EA Sbjct: 367 IMYSPYWIHRLKEYWGDDAEEFKPERWEQKDILKHPYQYVPFQKGPRICLGMNMAQEEAK 426
BLAST of mRNA_M-pyrifera_M_contig106148.1334.1 vs. uniprot
Match: A0A6B2LF84_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LF84_9EUKA) HSP 1 Score: 95.9 bits (237), Expect = 1.110e-22 Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 1 Query: 1 VVYSAYVLHRSPKFWGDDAEEFRPERWEEEGLIKHPYQYVPFQKGPRICLGMDMAYLEA 177 V YS +V+HR +WG+DAEEF PERWE L+KHPYQ+VPFQKGPR CLGM+MAY EA Sbjct: 181 VGYSPFVVHRLKAYWGEDAEEFHPERWENGELLKHPYQFVPFQKGPRQCLGMNMAYEEA 239
BLAST of mRNA_M-pyrifera_M_contig106148.1334.1 vs. uniprot
Match: A0A6B2L774_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L774_9EUKA) HSP 1 Score: 97.1 bits (240), Expect = 2.090e-22 Identity = 39/72 (54.17%), Postives = 56/72 (77.78%), Query Frame = 1 Query: 1 VVYSAYVLHRSPKFWGDDAEEFRPERWEEEGLIKHPYQYVPFQKGPRICLGMDMAYLEASLVLVRILCSGYR 216 V+Y+ Y++HR ++WG+DAE+FRPERW++ ++KH YQY+PFQKGPRICLGM+MA EA + + G+R Sbjct: 236 VMYTPYIVHRLKEYWGNDAEQFRPERWDDPNVLKHNYQYIPFQKGPRICLGMNMAQEEAKCCISILYQHGFR 307 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106148.1334.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106148.1334.1 >prot_M-pyrifera_M_contig106148.1334.1 ID=prot_M-pyrifera_M_contig106148.1334.1|Name=mRNA_M-pyrifera_M_contig106148.1334.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp VVYSAYVLHRSPKFWGDDAEEFRPERWEEEGLIKHPYQYVPFQKGPRICLback to top mRNA from alignment at M-pyrifera_M_contig106148:17..241+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106148.1334.1 ID=mRNA_M-pyrifera_M_contig106148.1334.1|Name=mRNA_M-pyrifera_M_contig106148.1334.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=225bp|location=Sequence derived from alignment at M-pyrifera_M_contig106148:17..241+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106148:17..241+ >mRNA_M-pyrifera_M_contig106148.1334.1 ID=mRNA_M-pyrifera_M_contig106148.1334.1|Name=mRNA_M-pyrifera_M_contig106148.1334.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig106148:17..241+ (Macrocystis pyrifera P11B4 male)back to top |