mRNA_M-pyrifera_M_contig10614.1332.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10614.1332.1 vs. uniprot
Match: D8LSK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK9_ECTSI) HSP 1 Score: 248 bits (634), Expect = 1.300e-75 Identity = 155/245 (63.27%), Postives = 181/245 (73.88%), Query Frame = 1 Query: 157 EAEERVRAEAAKLGATMAGRLGDRAKREEGFRTEAVEARDDVLRLQNALRVKEDRLAQTVVDYLELRHAMLKVQQASSVAREDAAAERIVQEEEVRECRKSTAKQTKDVTEQVARTCEEVGGELRRQIQLREDEACMLQEQRAEAEELYEARAVRLEELLDEWKAKYAALRRKFALETEGFRRDADNIGRH--RIRAGPPGGRPSISSRGGSSAKHAVERAMYSRANMASAPGRPAMGEAGASGG 885 EAEERVR EA+++GA +A RL +RA+R RLQ ALR KE+RLA TVV YLELRHAML+ Q+ +S AREDA R EEE+R+CR TA Q + +TE+V TCE+V EL RQ+QLR+DE CML+EQRAEAEELYEARAVRLE LL+EWK K+AALRR+F+LETEGFRRDADNIGR RIRAGPPGGRP+ISSR GSSA+ AVERA Y RA A + G A G G GG Sbjct: 256 EAEERVRVEASRVGAAVAVRLEERARRXXXXXXXXXXXXXXXXRLQTALRGKEERLANTVVSYLELRHAMLRAQRVASEAREDAKKGRAADEEEMRKCRSYTAYQVQAITERVKGTCEDVESELHRQVQLRKDEVCMLREQRAEAEELYEARAVRLESLLEEWKGKHAALRRRFSLETEGFRRDADNIGRRFERIRAGPPGGRPAISSRSGSSARLAVERAFYPRA-AAGSGGTAAAGAFGQLGG 499
BLAST of mRNA_M-pyrifera_M_contig10614.1332.1 vs. uniprot
Match: A0A6H5K077_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K077_9PHAE) HSP 1 Score: 181 bits (459), Expect = 2.290e-52 Identity = 113/190 (59.47%), Postives = 132/190 (69.47%), Query Frame = 1 Query: 343 YLELRHAMLKVQQASSVAREDAAAERIVQEEEV---------------------------RECRKSTAKQTKDVTEQVARTCEEVGGELRRQIQLREDEACMLQEQRAEAEELYEARAVRLEELLDEWKAKYAALRRKFALETEGFRRDADNIGRH--RIRAGPPGGRPSISSRGGSSAKHAVERAMYSR 825 + ELRHAML+ Q+ +S AREDA R EEE+ R+CR A Q + +TE+V TCE+V EL RQIQLR+DE CML+EQRAEAEELYEARAVRLE LL+EWK K+AALRR+F+LETEGFRRDADNIGR RIRAGPPGGRP+ISSR GSSA+ AVERA + R Sbjct: 43 FQELRHAMLRAQRVASEAREDAKKGRAADEEELKPLLSSCLRSDGALLPPFALHADTCQMRKCRSYMAYQVQAITERVKGTCEDVESELHRQIQLRKDEVCMLREQRAEAEELYEARAVRLESLLEEWKGKHAALRRRFSLETEGFRRDADNIGRRFERIRAGPPGGRPAISSRSGSSARLAVERAFHPR 232 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10614.1332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10614.1332.1 >prot_M-pyrifera_M_contig10614.1332.1 ID=prot_M-pyrifera_M_contig10614.1332.1|Name=mRNA_M-pyrifera_M_contig10614.1332.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=295bp RILELLRLTDPNRPTGPAAAAATAAAGEATGVASEGAEVSEELIGELEGRback to top mRNA from alignment at M-pyrifera_M_contig10614:1544..9982- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10614.1332.1 ID=mRNA_M-pyrifera_M_contig10614.1332.1|Name=mRNA_M-pyrifera_M_contig10614.1332.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8439bp|location=Sequence derived from alignment at M-pyrifera_M_contig10614:1544..9982- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10614:1544..9982- >mRNA_M-pyrifera_M_contig10614.1332.1 ID=mRNA_M-pyrifera_M_contig10614.1332.1|Name=mRNA_M-pyrifera_M_contig10614.1332.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1770bp|location=Sequence derived from alignment at M-pyrifera_M_contig10614:1544..9982- (Macrocystis pyrifera P11B4 male)back to top |