mRNA_M-pyrifera_M_contig106138.1331.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: UPI00106D9541 (THO complex subunit 2-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D9541) HSP 1 Score: 153 bits (386), Expect = 2.740e-39 Identity = 84/217 (38.71%), Postives = 130/217 (59.91%), Query Frame = 1 Query: 13 CESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKTAPDAV--------------PLERLLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQW-TKAYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618 C+ +L + V +L+HLGPNL D +L+ KV+R+ + K P+ V L L+ +V+ PSLS + NP++A VW LL PY RY LYG+W ++Y+ HP L+ V++K + + + KR+S + +K+ G+ +GKLSHSNP ++ +L I++ N + P VDSLKY+ P+S+DVL Y +++ LA P K +LK D NI Sbjct: 419 CKVFSDLTDCVFPLLFHLGPNLSFDPILMAKVIRVGRAFLKENPNVVLGQDRDTKLLAVWNSLTELVDQVLFPSLSLLECNPSIAEEVWILLKAFPYNIRYCLYGRWKNQSYNMHPRLIEVKAKTIKKAKYIAKRLSKEN--VKQSGRQIGKLSHSNPGVLFEYILSQIQKYDNFIGPVVDSLKYLTPMSYDVLAYCIIEALANPEKERLKLDDTNI 633
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: A0A6S7LF99_PARCT (THO complex subunit 2, partial (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7LF99_PARCT) HSP 1 Score: 144 bits (362), Expect = 1.420e-38 Identity = 80/216 (37.04%), Postives = 128/216 (59.26%), Query Frame = 1 Query: 13 CESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKTAPDAVPLER-------------LLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQW-TKAYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618 C+ +L + V +L++LGP L D +L+ KV+R+ + K P+ ++ L+ +V+ PSLS + NP++A VW LL PY RY LYG+W ++Y+ HP L+ R+K + + + KR+S + +K+ G+ +GKLSHSNP ++ +L I++ N + P VDSLKY+ P+S+DVL Y +++ LA P K +LK D NI Sbjct: 81 CKVFGDLTDCVFPLLFNLGPYLSFDPILMAKVIRVGRTFLKENPNVTGQDKDVKLLAVWNGLIELVDQVLFPSLSLLECNPSIAEEVWILLKAFPYNIRYCLYGRWKNQSYNLHPKLIDARAKTIKKAKYIAKRLSKEN--VKQSGRQIGKLSHSNPGVLFEYILSQIQKYDNFIGPVVDSLKYLTPMSYDVLAYCIIEALANPEKERLKLDDTNI 294
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: A0A7D9JLH9_PARCT (THO complex subunit 2, partial (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JLH9_PARCT) HSP 1 Score: 144 bits (362), Expect = 9.180e-38 Identity = 80/216 (37.04%), Postives = 128/216 (59.26%), Query Frame = 1 Query: 13 CESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKTAPDAVPLER-------------LLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQW-TKAYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618 C+ +L + V +L++LGP L D +L+ KV+R+ + K P+ ++ L+ +V+ PSLS + NP++A VW LL PY RY LYG+W ++Y+ HP L+ R+K + + + KR+S + +K+ G+ +GKLSHSNP ++ +L I++ N + P VDSLKY+ P+S+DVL Y +++ LA P K +LK D NI Sbjct: 89 CKVFGDLTDCVFPLLFNLGPYLSFDPILMAKVIRVGRTFLKENPNVTGQDKDVKLLAVWNGLIELVDQVLFPSLSLLECNPSIAEEVWILLKAFPYNIRYCLYGRWKNQSYNLHPKLIDARAKTIKKAKYIAKRLSKEN--VKQSGRQIGKLSHSNPGVLFEYILSQIQKYDNFIGPVVDSLKYLTPMSYDVLAYCIIEALANPEKERLKLDDTNI 302
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: A0A1V9ZJP2_9STRA (THO complex subunit 2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJP2_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.140e-35 Identity = 80/207 (38.65%), Postives = 127/207 (61.35%), Query Frame = 1 Query: 1 MIPPCESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKT-APDAVPLERLLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQWTKAYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618 ++ P ++ +E+++ V +L+ LGP L HD L TK+ R++ H T A A PLE L + + P+LS PNL +WELL P KRY+LY +W + Y P L LVR++ RKV++R++ D K G++L ++H+NPLI +L ++ N++QP V+SLKYI PL DVL++V++ L++P ++ K+DG N+ Sbjct: 409 VVAPLQTLQEMVDVVFPMLHLLGPFLFHDQRLWTKLQRILLHALPTHAFLAAPLEALFTQCLFPTLSLHLCCPNLVYQMWELLKAFPCEKRYELYQRWQEQYTAVPELALVRAQTEHATRKVMRRLTADKT--KPTGRVLTHVAHANPLIAFRTILQQLQAYENLIQPVVESLKYISPLGMDVLSFVLITELSRP-RASFKADGTNV 612
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: A0A6G0W9K7_9STRA (THO complex subunit 2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9K7_9STRA) HSP 1 Score: 140 bits (353), Expect = 7.230e-35 Identity = 74/206 (35.92%), Postives = 125/206 (60.68%), Query Frame = 1 Query: 1 MIPPCESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKTAPDAVPLERLLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQWTKAYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618 +I P + +E + QVL LY LGP+LCHD L TK+LR++ + P+ ++ L+ LP+LS P+L +W+LL KRY Y W + Y P L+L+++++ RK+++R++ D K G++L ++H+NPL+ ++ ++ N++QP V+SLKYI PL DVL+YV++ L++P K+ K+DG+N+ Sbjct: 404 VIAPVRTVDEFVAQVLPKLYLLGPHLCHDQFLWTKLLRILCQENHSIPEEA-VDSLISTCFLPALSLHQCCPHLVHKMWDLLKNYSCQKRYLFYQLWQEQYKSTPELMLIQAQSVQATRKIMRRLTADKT--KPTGRLLTHVAHANPLVAFRTIMQQLQSYENLIQPVVESLKYISPLGMDVLSYVLISELSRPRKT-FKADGQNV 605
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: UPI001F036BC2 (THO complex subunit 2-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F036BC2) HSP 1 Score: 139 bits (351), Expect = 1.330e-34 Identity = 80/217 (36.87%), Postives = 125/217 (57.60%), Query Frame = 1 Query: 13 CESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKTAPDAVPLER--------------LLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQWTK-AYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618 C +L V +L LGP L D +L+ KV+R+ + K P+ ++ L+ +V+ PSL+ + NP++A VW LL PYT RY LYG+W +Y+ HP L+ V++K + + + KR+S + +K+ G+ +GKLSHSNP ++ +L I++ N + P VDSLKY+ P+S+DVL Y +++ LA P K +LK D NI Sbjct: 423 CMLFTDLTNCVFPMLLQLGPFLSFDPILMAKVVRIGRFFLKENPNCSSIQDKDSKLLAVWNGLIDLVDQVLFPSLTLLECNPSIAEEVWILLKAFPYTIRYCLYGRWKNYSYNVHPKLIDVKAKTIKKAKYIAKRLSKEN--VKQSGRQIGKLSHSNPGVLFEYILSQIQKYDNFIGPVVDSLKYLTPMSYDVLAYCIIEALANPEKERLKLDDTNI 637
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: A0A2D4C734_PYTIN (THO complex subunit 2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C734_PYTIN) HSP 1 Score: 139 bits (350), Expect = 1.880e-34 Identity = 79/200 (39.50%), Postives = 125/200 (62.50%), Query Frame = 1 Query: 34 MEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWY--KTAPDAVPLERL---LGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQWTKAYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618 +E++ A+L LGP+L HD L TK+LR+V+ +TA D L RL L + +LP+LS P +P+ A +WELL P+ +RY+LY QW+ Y P+L L+ + E R+V++R++ D K + L ++HSNPL+V +L I+ N++QP V+S K++ PL DVL++V++ LA+ S+ +K+DG NI Sbjct: 488 LEELTAMLKTLGPHLHHDSFLFTKILRVVSAATASRTAGDKSWLSRLEPLLTQCLLPALSLQPCSPSTAFQLWELLKGFPFDERYRLYQQWSATYATRPALQLMEAHCVQETRRVMRRLTADR--AKPSARTLTHVAHSNPLVVFRTMLRQIQSYDNLIQPVVESFKFVTPLGMDVLSFVLVSELAKSSRQSIKADGTNI 685
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: A0A7M5XKI0_9CNID (THO complex subunit 2 n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XKI0_9CNID) HSP 1 Score: 136 bits (342), Expect = 2.160e-33 Identity = 77/216 (35.65%), Postives = 123/216 (56.94%), Query Frame = 1 Query: 10 PCESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKTAPDAVPLER------------LLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQWTK-AYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618 PC +L + V +L+ LGP L +D VL KV+R+ + K A + + L+ V+ PSLS + N +A ++ L+ +LPY +RY LY W +Y HP L++V++K + + KR+S + +K+ G+ +GKLSHSNP ++ LL I+R N + P VDSLKY+ PL++DV+T+ V++ LA P K ++K N+ Sbjct: 402 PCLQYSQLTDDVFPMLFKLGPYLSYDPVLFVKVVRVAKGFIKEYSQASDILKEGLKQVYAGMLSLIDEVLFPSLSLLDCNCCIAEELYGLVKRLPYEQRYHLYALWKNYSYYTHPLLIVVKAKTIKRAKYITKRLSKEN--VKQSGRQIGKLSHSNPCVLFDHLLDQIQRYDNFIGPMVDSLKYLNPLAYDVMTFCVIEALANPDKQRMKQSDTNL 615
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: A0A0L0D726_THETB (THO complex subunit 2 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D726_THETB) HSP 1 Score: 134 bits (337), Expect = 1.030e-32 Identity = 68/152 (44.74%), Postives = 101/152 (66.45%), Query Frame = 1 Query: 166 LLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQWTK-AYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618 L+ V+LP+ S +P NP LA+ V+ +L L YT+R+++Y +W+ AYD HP L VR+K E R V++R+S A K+ G++LGKLSH NPL+V L ++ NM++P V++LKY+ PLS DV +Y ++ LA PS S+LK DG + Sbjct: 482 LISGVLLPAFSLLPANPGLAADVFGMLGHLGYTRRFEIYARWSAHAYDAHPLLTFVRAKVEFETRGVLRRLS--AENTKQYGRVLGKLSHGNPLVVVETLFGQLKTYDNMIEPVVEALKYLTPLSFDVASYAIVGALADPSASRLKDDGSTV 631
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: C3YRS5_BRAFL (THO complex subunit 2 (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YRS5_BRAFL) HSP 1 Score: 133 bits (335), Expect = 1.810e-32 Identity = 73/215 (33.95%), Postives = 123/215 (57.21%), Query Frame = 1 Query: 7 PPCESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKTAPDAVPLERLLG----------RVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQW-TKAYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618 P +L +QV +L HLGP+L D VL+ KV+R+ + K + + L V+LP++S + N ++ +W L+ PY RY++YGQW +AY H L+ ++++ + + ++KR++ + IK G+++GKLSH+NP ++ +L I+R N++ P VDSLKY+ LS+DVL Y +++ LA P K ++K D I Sbjct: 224 PQVHQYSDLPQQVFIMLQHLGPHLACDTVLMAKVIRIGKAFMKEVGNPGKKQELSAVFYGLLTATDEVLLPTMSMLDANCCMSEELWSLIKTFPYEYRYRMYGQWKNQAYALHTQLIRIKAQTMDKTKHIMKRLTKEN--IKPMGRLIGKLSHANPGVLFEIILSQIQRYENLINPVVDSLKYLTTLSYDVLAYCIIEALANPEKERMKHDDTTI 436 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106138.1331.1 >prot_M-pyrifera_M_contig106138.1331.1 ID=prot_M-pyrifera_M_contig106138.1331.1|Name=mRNA_M-pyrifera_M_contig106138.1331.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp MIPPCESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKTAPDAback to top mRNA from alignment at M-pyrifera_M_contig106138:5..622- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106138.1331.1 ID=mRNA_M-pyrifera_M_contig106138.1331.1|Name=mRNA_M-pyrifera_M_contig106138.1331.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig106138:5..622- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106138:5..622- >mRNA_M-pyrifera_M_contig106138.1331.1 ID=mRNA_M-pyrifera_M_contig106138.1331.1|Name=mRNA_M-pyrifera_M_contig106138.1331.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1236bp|location=Sequence derived from alignment at M-pyrifera_M_contig106138:5..622- (Macrocystis pyrifera P11B4 male)back to top |