mRNA_M-pyrifera_M_contig106138.1331.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig106138.1331.1
Unique NamemRNA_M-pyrifera_M_contig106138.1331.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: UPI00106D9541 (THO complex subunit 2-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D9541)

HSP 1 Score: 153 bits (386), Expect = 2.740e-39
Identity = 84/217 (38.71%), Postives = 130/217 (59.91%), Query Frame = 1
Query:   13 CESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKTAPDAV--------------PLERLLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQW-TKAYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618
            C+   +L + V  +L+HLGPNL  D +L+ KV+R+   + K  P+ V               L  L+ +V+ PSLS +  NP++A  VW LL   PY  RY LYG+W  ++Y+ HP L+ V++K   + + + KR+S +   +K+ G+ +GKLSHSNP ++   +L  I++  N + P VDSLKY+ P+S+DVL Y +++ LA P K +LK D  NI
Sbjct:  419 CKVFSDLTDCVFPLLFHLGPNLSFDPILMAKVIRVGRAFLKENPNVVLGQDRDTKLLAVWNSLTELVDQVLFPSLSLLECNPSIAEEVWILLKAFPYNIRYCLYGRWKNQSYNMHPRLIEVKAKTIKKAKYIAKRLSKEN--VKQSGRQIGKLSHSNPGVLFEYILSQIQKYDNFIGPVVDSLKYLTPMSYDVLAYCIIEALANPEKERLKLDDTNI 633          
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: A0A6S7LF99_PARCT (THO complex subunit 2, partial (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7LF99_PARCT)

HSP 1 Score: 144 bits (362), Expect = 1.420e-38
Identity = 80/216 (37.04%), Postives = 128/216 (59.26%), Query Frame = 1
Query:   13 CESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKTAPDAVPLER-------------LLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQW-TKAYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618
            C+   +L + V  +L++LGP L  D +L+ KV+R+   + K  P+    ++             L+ +V+ PSLS +  NP++A  VW LL   PY  RY LYG+W  ++Y+ HP L+  R+K   + + + KR+S +   +K+ G+ +GKLSHSNP ++   +L  I++  N + P VDSLKY+ P+S+DVL Y +++ LA P K +LK D  NI
Sbjct:   81 CKVFGDLTDCVFPLLFNLGPYLSFDPILMAKVIRVGRTFLKENPNVTGQDKDVKLLAVWNGLIELVDQVLFPSLSLLECNPSIAEEVWILLKAFPYNIRYCLYGRWKNQSYNLHPKLIDARAKTIKKAKYIAKRLSKEN--VKQSGRQIGKLSHSNPGVLFEYILSQIQKYDNFIGPVVDSLKYLTPMSYDVLAYCIIEALANPEKERLKLDDTNI 294          
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: A0A7D9JLH9_PARCT (THO complex subunit 2, partial (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JLH9_PARCT)

HSP 1 Score: 144 bits (362), Expect = 9.180e-38
Identity = 80/216 (37.04%), Postives = 128/216 (59.26%), Query Frame = 1
Query:   13 CESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKTAPDAVPLER-------------LLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQW-TKAYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618
            C+   +L + V  +L++LGP L  D +L+ KV+R+   + K  P+    ++             L+ +V+ PSLS +  NP++A  VW LL   PY  RY LYG+W  ++Y+ HP L+  R+K   + + + KR+S +   +K+ G+ +GKLSHSNP ++   +L  I++  N + P VDSLKY+ P+S+DVL Y +++ LA P K +LK D  NI
Sbjct:   89 CKVFGDLTDCVFPLLFNLGPYLSFDPILMAKVIRVGRTFLKENPNVTGQDKDVKLLAVWNGLIELVDQVLFPSLSLLECNPSIAEEVWILLKAFPYNIRYCLYGRWKNQSYNLHPKLIDARAKTIKKAKYIAKRLSKEN--VKQSGRQIGKLSHSNPGVLFEYILSQIQKYDNFIGPVVDSLKYLTPMSYDVLAYCIIEALANPEKERLKLDDTNI 302          
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: A0A1V9ZJP2_9STRA (THO complex subunit 2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJP2_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.140e-35
Identity = 80/207 (38.65%), Postives = 127/207 (61.35%), Query Frame = 1
Query:    1 MIPPCESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKT-APDAVPLERLLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQWTKAYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618
            ++ P ++ +E+++ V  +L+ LGP L HD  L TK+ R++ H   T A  A PLE L  + + P+LS     PNL   +WELL   P  KRY+LY +W + Y   P L LVR++     RKV++R++ D    K  G++L  ++H+NPLI    +L  ++   N++QP V+SLKYI PL  DVL++V++  L++P ++  K+DG N+
Sbjct:  409 VVAPLQTLQEMVDVVFPMLHLLGPFLFHDQRLWTKLQRILLHALPTHAFLAAPLEALFTQCLFPTLSLHLCCPNLVYQMWELLKAFPCEKRYELYQRWQEQYTAVPELALVRAQTEHATRKVMRRLTADKT--KPTGRVLTHVAHANPLIAFRTILQQLQAYENLIQPVVESLKYISPLGMDVLSFVLITELSRP-RASFKADGTNV 612          
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: A0A6G0W9K7_9STRA (THO complex subunit 2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9K7_9STRA)

HSP 1 Score: 140 bits (353), Expect = 7.230e-35
Identity = 74/206 (35.92%), Postives = 125/206 (60.68%), Query Frame = 1
Query:    1 MIPPCESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKTAPDAVPLERLLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQWTKAYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618
            +I P  + +E + QVL  LY LGP+LCHD  L TK+LR++     + P+   ++ L+    LP+LS     P+L   +W+LL      KRY  Y  W + Y   P L+L+++++    RK+++R++ D    K  G++L  ++H+NPL+    ++  ++   N++QP V+SLKYI PL  DVL+YV++  L++P K+  K+DG+N+
Sbjct:  404 VIAPVRTVDEFVAQVLPKLYLLGPHLCHDQFLWTKLLRILCQENHSIPEEA-VDSLISTCFLPALSLHQCCPHLVHKMWDLLKNYSCQKRYLFYQLWQEQYKSTPELMLIQAQSVQATRKIMRRLTADKT--KPTGRLLTHVAHANPLVAFRTIMQQLQSYENLIQPVVESLKYISPLGMDVLSYVLISELSRPRKT-FKADGQNV 605          
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: UPI001F036BC2 (THO complex subunit 2-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F036BC2)

HSP 1 Score: 139 bits (351), Expect = 1.330e-34
Identity = 80/217 (36.87%), Postives = 125/217 (57.60%), Query Frame = 1
Query:   13 CESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKTAPDAVPLER--------------LLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQWTK-AYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618
            C    +L   V  +L  LGP L  D +L+ KV+R+   + K  P+   ++               L+ +V+ PSL+ +  NP++A  VW LL   PYT RY LYG+W   +Y+ HP L+ V++K   + + + KR+S +   +K+ G+ +GKLSHSNP ++   +L  I++  N + P VDSLKY+ P+S+DVL Y +++ LA P K +LK D  NI
Sbjct:  423 CMLFTDLTNCVFPMLLQLGPFLSFDPILMAKVVRIGRFFLKENPNCSSIQDKDSKLLAVWNGLIDLVDQVLFPSLTLLECNPSIAEEVWILLKAFPYTIRYCLYGRWKNYSYNVHPKLIDVKAKTIKKAKYIAKRLSKEN--VKQSGRQIGKLSHSNPGVLFEYILSQIQKYDNFIGPVVDSLKYLTPMSYDVLAYCIIEALANPEKERLKLDDTNI 637          
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: A0A2D4C734_PYTIN (THO complex subunit 2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C734_PYTIN)

HSP 1 Score: 139 bits (350), Expect = 1.880e-34
Identity = 79/200 (39.50%), Postives = 125/200 (62.50%), Query Frame = 1
Query:   34 MEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWY--KTAPDAVPLERL---LGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQWTKAYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618
            +E++ A+L  LGP+L HD  L TK+LR+V+     +TA D   L RL   L + +LP+LS  P +P+ A  +WELL   P+ +RY+LY QW+  Y   P+L L+ +    E R+V++R++ D    K   + L  ++HSNPL+V   +L  I+   N++QP V+S K++ PL  DVL++V++  LA+ S+  +K+DG NI
Sbjct:  488 LEELTAMLKTLGPHLHHDSFLFTKILRVVSAATASRTAGDKSWLSRLEPLLTQCLLPALSLQPCSPSTAFQLWELLKGFPFDERYRLYQQWSATYATRPALQLMEAHCVQETRRVMRRLTADR--AKPSARTLTHVAHSNPLVVFRTMLRQIQSYDNLIQPVVESFKFVTPLGMDVLSFVLVSELAKSSRQSIKADGTNI 685          
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: A0A7M5XKI0_9CNID (THO complex subunit 2 n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XKI0_9CNID)

HSP 1 Score: 136 bits (342), Expect = 2.160e-33
Identity = 77/216 (35.65%), Postives = 123/216 (56.94%), Query Frame = 1
Query:   10 PCESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKTAPDAVPLER------------LLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQWTK-AYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618
            PC    +L + V  +L+ LGP L +D VL  KV+R+   + K    A  + +            L+  V+ PSLS +  N  +A  ++ L+ +LPY +RY LY  W   +Y  HP L++V++K     + + KR+S +   +K+ G+ +GKLSHSNP ++   LL  I+R  N + P VDSLKY+ PL++DV+T+ V++ LA P K ++K    N+
Sbjct:  402 PCLQYSQLTDDVFPMLFKLGPYLSYDPVLFVKVVRVAKGFIKEYSQASDILKEGLKQVYAGMLSLIDEVLFPSLSLLDCNCCIAEELYGLVKRLPYEQRYHLYALWKNYSYYTHPLLIVVKAKTIKRAKYITKRLSKEN--VKQSGRQIGKLSHSNPCVLFDHLLDQIQRYDNFIGPMVDSLKYLNPLAYDVMTFCVIEALANPDKQRMKQSDTNL 615          
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: A0A0L0D726_THETB (THO complex subunit 2 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D726_THETB)

HSP 1 Score: 134 bits (337), Expect = 1.030e-32
Identity = 68/152 (44.74%), Postives = 101/152 (66.45%), Query Frame = 1
Query:  166 LLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQWTK-AYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618
            L+  V+LP+ S +P NP LA+ V+ +L  L YT+R+++Y +W+  AYD HP L  VR+K   E R V++R+S  A   K+ G++LGKLSH NPL+V   L   ++   NM++P V++LKY+ PLS DV +Y ++  LA PS S+LK DG  +
Sbjct:  482 LISGVLLPAFSLLPANPGLAADVFGMLGHLGYTRRFEIYARWSAHAYDAHPLLTFVRAKVEFETRGVLRRLS--AENTKQYGRVLGKLSHGNPLVVVETLFGQLKTYDNMIEPVVEALKYLTPLSFDVASYAIVGALADPSASRLKDDGSTV 631          
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Match: C3YRS5_BRAFL (THO complex subunit 2 (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YRS5_BRAFL)

HSP 1 Score: 133 bits (335), Expect = 1.810e-32
Identity = 73/215 (33.95%), Postives = 123/215 (57.21%), Query Frame = 1
Query:    7 PPCESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKTAPDAVPLERLLG----------RVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQW-TKAYDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIVAHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLKSDGKNI 618
            P      +L +QV  +L HLGP+L  D VL+ KV+R+   + K   +    + L             V+LP++S +  N  ++  +W L+   PY  RY++YGQW  +AY  H  L+ ++++   + + ++KR++ +   IK  G+++GKLSH+NP ++   +L  I+R  N++ P VDSLKY+  LS+DVL Y +++ LA P K ++K D   I
Sbjct:  224 PQVHQYSDLPQQVFIMLQHLGPHLACDTVLMAKVIRIGKAFMKEVGNPGKKQELSAVFYGLLTATDEVLLPTMSMLDANCCMSEELWSLIKTFPYEYRYRMYGQWKNQAYALHTQLIRIKAQTMDKTKHIMKRLTKEN--IKPMGRLIGKLSHANPGVLFEIILSQIQRYENLINPVVDSLKYLTTLSYDVLAYCIIEALANPEKERMKHDDTTI 436          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106138.1331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00106D95412.740e-3938.71THO complex subunit 2-like n=1 Tax=Dendronephthya ... [more]
A0A6S7LF99_PARCT1.420e-3837.04THO complex subunit 2, partial (Fragment) n=1 Tax=... [more]
A0A7D9JLH9_PARCT9.180e-3837.04THO complex subunit 2, partial (Fragment) n=1 Tax=... [more]
A0A1V9ZJP2_9STRA1.140e-3538.65THO complex subunit 2 n=1 Tax=Achlya hypogyna TaxI... [more]
A0A6G0W9K7_9STRA7.230e-3535.92THO complex subunit 2 n=1 Tax=Aphanomyces euteiche... [more]
UPI001F036BC21.330e-3436.87THO complex subunit 2-like n=1 Tax=Xenia sp. Carne... [more]
A0A2D4C734_PYTIN1.880e-3439.50THO complex subunit 2 n=1 Tax=Pythium insidiosum T... [more]
A0A7M5XKI0_9CNID2.160e-3335.65THO complex subunit 2 n=1 Tax=Clytia hemisphaerica... [more]
A0A0L0D726_THETB1.030e-3244.74THO complex subunit 2 n=1 Tax=Thecamonas trahens A... [more]
C3YRS5_BRAFL1.810e-3233.95THO complex subunit 2 (Fragment) n=1 Tax=Branchios... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig106138contigM-pyrifera_M_contig106138:5..622 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score154.1
Seed ortholog evalue7.3e-35
Seed eggNOG ortholog42345.XP_008787912.1
Preferred nameTHO2
KEGG koko:K12879
KEGG Pathwayko03013,ko03040,map03013,map03040
KEGG ModuleM00405,M00406
Hectar predicted targeting categoryother localisation
GOsGO:0000346,GO:0000347,GO:0000445,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006396,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008152,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0014070,GO:0015031,GO:0015833,GO:0015931,GO:0016070,GO:0016441,GO:0016458,GO:0016604,GO:0016607,GO:0019222,GO:0031047,GO:0031050,GO:0031503,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0034613,GO:0034641,GO:0035194,GO:0035195,GO:0035196,GO:0040029,GO:0042221,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043331,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045184,GO:0046483,GO:0046907,GO:0048519,GO:0050657,GO:0050658,GO:0050789,GO:0050896,GO:0051028,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0070727,GO:0070887,GO:0070918,GO:0071166,GO:0071310,GO:0071359,GO:0071407,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901698,GO:1901699,GO:1990428
EggNOG free text desc.Transcription factor/nuclear export subunit protein 2
EggNOG OGs37SVS@33090,3GF3W@35493,3KU1E@4447,KOG1874@1,KOG1874@2759
COG Functional cat.K
Best tax levelLiliopsida
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03041
Exons1
Model size618
Cds size618
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815571.3808427-CDS-M-pyrifera_M_contig106138:4..6221622815571.3808427-CDS-M-pyrifera_M_contig106138:4..622Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig106138 5..622 -
1692277468.9156778-CDS-M-pyrifera_M_contig106138:4..6221692277468.9156778-CDS-M-pyrifera_M_contig106138:4..622Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig106138 5..622 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig106138.1331.1prot_M-pyrifera_M_contig106138.1331.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig106138 5..622 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig106138.1331.1

>prot_M-pyrifera_M_contig106138.1331.1 ID=prot_M-pyrifera_M_contig106138.1331.1|Name=mRNA_M-pyrifera_M_contig106138.1331.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp
MIPPCESSEELMEQVLAVLYHLGPNLCHDVVLLTKVLRMVTHWYKTAPDA
VPLERLLGRVILPSLSGVPMNPNLASCVWELLSKLPYTKRYQLYGQWTKA
YDKHPSLLLVRSKARAELRKVVKRISTDANMIKKCGKILGKLSHSNPLIV
AHELLVNIERSPNMVQPTVDSLKYIGPLSHDVLTYVVLDHLAQPSKSKLK
SDGKNI
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mRNA from alignment at M-pyrifera_M_contig106138:5..622-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig106138.1331.1 ID=mRNA_M-pyrifera_M_contig106138.1331.1|Name=mRNA_M-pyrifera_M_contig106138.1331.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig106138:5..622- (Macrocystis pyrifera P11B4 male)
ATGATACCCCCGTGCGAGTCTTCCGAGGAGCTCATGGAGCAGGTGCTGGC CGTTCTGTACCACCTGGGGCCCAACCTCTGCCACGACGTGGTGCTGCTGA CCAAGGTGCTGCGCATGGTGACCCACTGGTACAAGACGGCGCCCGACGCA GTGCCGCTGGAGCGGCTGCTGGGCCGCGTTATTCTCCCCTCGCTGAGCGG AGTGCCCATGAACCCCAACCTGGCGAGCTGCGTGTGGGAGCTGCTCTCCA AGCTGCCCTACACCAAGCGCTACCAGCTGTACGGCCAGTGGACCAAGGCC TACGACAAGCACCCTTCGCTGCTGTTGGTGCGCTCCAAGGCAAGGGCGGA GCTGAGGAAGGTGGTGAAGCGCATCTCCACGGACGCCAACATGATCAAGA AGTGCGGCAAGATCCTCGGCAAGCTCAGCCACTCCAACCCCCTCATCGTC GCGCACGAGCTCCTCGTCAACATCGAGCGCAGCCCCAACATGGTGCAGCC CACCGTTGACTCGCTGAAGTACATTGGGCCGCTCAGCCACGACGTGCTCA CCTACGTGGTGCTGGACCACCTCGCCCAGCCCTCCAAGAGCAAACTCAAG TCGGACGGCAAGAACATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig106138:5..622-

>mRNA_M-pyrifera_M_contig106138.1331.1 ID=mRNA_M-pyrifera_M_contig106138.1331.1|Name=mRNA_M-pyrifera_M_contig106138.1331.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1236bp|location=Sequence derived from alignment at M-pyrifera_M_contig106138:5..622- (Macrocystis pyrifera P11B4 male)
ATGATACCCCCGTGCGAGTCTTCCGAGGAGCTCATGGAGCAGGTGCTGGC
CGTTCTGTACCACCTGGGGCCCAACCTCTGCCACGACGTGGTGCTGCTGA
CCAAGGTGCTGCGCATGGTGACCCACTGGTACAAGACGGCGCCCGACGCA
GTGCCGCTGGAGCGGCTGCTGGGCCGCGTTATTCTCCCCTCGCTGAGCGG
AGTGCCCATGAACCCCAACCTGGCGAGCTGCGTGTGGGAGCTGCTCTCCA
AGCTGCCCTACACCAAGCGCTACCAGCTGTACGGCCAGTGGACCAAGGCC
TACGACAAGCACCCTTCGCTGCTGTTGGTGCGCTCCAAGGCAAGGGCGGA
GCTGAGGAAGGTGGTGAAGCGCATCTCCACGGACGCCAACATGATCAAGA
AGTGCGGCAAGATCCTCGGCAAGCTCAGCCACTCCAACCCCCTCATCGTC
GCGCACGAGCTCCTCGTCAACATCGAGCGCAGCCCCAACATGGTGCAGCC
CACCGTTGACTCGCTGAAGTACATTGGGCCGCTCAGCCACGACGTGCTCA
CCTACGTGGTGCTGGACCACCTCGCCCAGCCCTCCAAGAGCAAACTCAAG
TCGGACGGCAAGAACATCATGATACCCCCGTGCGAGTCTTCCGAGGAGCT
CATGGAGCAGGTGCTGGCCGTTCTGTACCACCTGGGGCCCAACCTCTGCC
ACGACGTGGTGCTGCTGACCAAGGTGCTGCGCATGGTGACCCACTGGTAC
AAGACGGCGCCCGACGCAGTGCCGCTGGAGCGGCTGCTGGGCCGCGTTAT
TCTCCCCTCGCTGAGCGGAGTGCCCATGAACCCCAACCTGGCGAGCTGCG
TGTGGGAGCTGCTCTCCAAGCTGCCCTACACCAAGCGCTACCAGCTGTAC
GGCCAGTGGACCAAGGCCTACGACAAGCACCCTTCGCTGCTGTTGGTGCG
CTCCAAGGCAAGGGCGGAGCTGAGGAAGGTGGTGAAGCGCATCTCCACGG
ACGCCAACATGATCAAGAAGTGCGGCAAGATCCTCGGCAAGCTCAGCCAC
TCCAACCCCCTCATCGTCGCGCACGAGCTCCTCGTCAACATCGAGCGCAG
CCCCAACATGGTGCAGCCCACCGTTGACTCGCTGAAGTACATTGGGCCGC
TCAGCCACGACGTGCTCACCTACGTGGTGCTGGACCACCTCGCCCAGCCC
TCCAAGAGCAAACTCAAGTCGGACGGCAAGAACATC
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