mRNA_M-pyrifera_M_contig106135.1329.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106135.1329.1 vs. uniprot
Match: R7QDH4_CHOCR (E2F_TDP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDH4_CHOCR) HSP 1 Score: 155 bits (393), Expect = 3.710e-43 Identity = 84/181 (46.41%), Postives = 116/181 (64.09%), Query Frame = 1 Query: 46 KPRGSRFESSLALLTQRFTALVKNHVAQPLDLNTAAQILRVQKRRIYDITNVLEGIGLLDKTTKNAIQWRGTACLNASATAQLEEVRQEVQQLKAEEERLDQQVALALGELQTDKRREDAQPLSYTIASDIYKLRCFAGKTVLVVRAPAGTTLEVPDPDDGVETGFKRFQIVLKSAGAPID 588 K R R++SSL LLT +F L+K LDLN AA+ L+VQKRRIYDITNVLEGIG+++K +KN I+WR S A+L E+ E++ LK E++ +DQ +A+ G+L+ E +Y DI + G T++ ++AP GT LEVPDPD+G+ G +R+QI LKS G PID Sbjct: 65 KDRACRYDSSLGLLTTKFVNLLKASTDGALDLNLAAEKLQVQKRRIYDITNVLEGIGIIEKKSKNNIKWRHQVETGRSCEAELAELSAELESLKREDDAMDQAIAVYHGKLRALATGEQCAAFAYVTHKDIKAIPELRGDTLIAIKAPPGTELEVPDPDEGMPYGERRYQIFLKSTGGPID 245
BLAST of mRNA_M-pyrifera_M_contig106135.1329.1 vs. uniprot
Match: A0A0M0JWF8_9EUKA (Transcription factor e2f n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JWF8_9EUKA) HSP 1 Score: 154 bits (389), Expect = 6.420e-43 Identity = 85/186 (45.70%), Postives = 125/186 (67.20%), Query Frame = 1 Query: 46 KPRGSRFESSLALLTQRFTALVKNHVAQPLDLNTAAQILRVQKRRIYDITNVLEGIGLLDKTTKNAIQWRGTACLNASATAQLEEVRQEVQQLKAEEERLDQQVALALGELQTDKR--REDAQPLSYTIAS--DIYKLRCFAGKTVLVVRAPAGTTLEVPDPDDGVETGFKRFQIVLKSAGAPIDV 591 K + R++SSL LLT++FTAL++ LDLN AAQ+L VQKRRIYDITNVLEGIG+++K +KN IQW+G +++ A+L++++ EV+ E LDQ A+ E+Q+ R ED SY + D+ + FA TV+ ++AP+GTTLEVPDPD+G++ +R+QI L+S P++V Sbjct: 50 KQKTCRYDSSLGLLTKKFTALIQGAPEGVLDLNAAAQMLGVQKRRIYDITNVLEGIGIIEKRSKNNIQWKGLGANSSNMQAELDQLKGEVRSSAESETWLDQ----AIMEMQSSLRDLAEDQANASYAFVTHEDVRNINAFAADTVIAIKAPSGTTLEVPDPDEGMDYPQRRYQIYLRSTSGPVEV 231
BLAST of mRNA_M-pyrifera_M_contig106135.1329.1 vs. uniprot
Match: L8HBK9_ACACA (Transcription factor e2f domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HBK9_ACACA) HSP 1 Score: 158 bits (399), Expect = 1.850e-42 Identity = 85/178 (47.75%), Postives = 116/178 (65.17%), Query Frame = 1 Query: 58 SRFESSLALLTQRFTALVKNHVAQPLDLNTAAQILRVQKRRIYDITNVLEGIGLLDKTTKNAIQWRGTACLNASATAQLEEVRQEVQQLKAEEERLDQQVALALGELQTDKRREDAQPLSYTIASDIYKLRCFAGKTVLVVRAPAGTTLEVPDPDDGVETGFKRFQIVLKSAGAPIDV 591 +RF+SSL LLT++F LV+ +DLN AA+ L VQKRRIYDITNVLEGIGL++K +KN IQWRG +L VR+EV QL +E LD+++ A ++ Q L++ D+ L CF G T++ ++AP+GT LEVPDPD+G+ +R+QI LKS+G PIDV Sbjct: 177 TRFDSSLGLLTKKFITLVRTAPDGSIDLNKAAEQLSVQKRRIYDITNVLEGIGLIEKKSKNHIQWRGEGIATEEERLRLGTVREEVAQLVQQELALDERIRQAQTNIKRLSDDPANQQLAFITYEDLVSLPCFQGDTLIAIKAPSGTRLEVPDPDEGMPANQRRYQIFLKSSGEPIDV 354
BLAST of mRNA_M-pyrifera_M_contig106135.1329.1 vs. uniprot
Match: D8LEV2_ECTSI (Transcription factor E2F n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEV2_ECTSI) HSP 1 Score: 154 bits (388), Expect = 9.280e-42 Identity = 89/182 (48.90%), Postives = 118/182 (64.84%), Query Frame = 1 Query: 58 SRFESSLALLTQRFTALVKNHVAQPLDLNTAAQILRVQKRRIYDITNVLEGIGLLDKTTKNAIQWRGTAC-LNASATAQLEEVRQEVQQLKAEEERLDQQVALALGELQ---TDKRREDAQPLSYTIASDIYKLRCFAGKTVLVVRAPAGTTLEVPDPDDGVETGFKRFQIVLKSAGAPIDV 591 +RF+SSL LLT+RF L++ LDLN AA+ L VQKRRIYDITNVLEGIGL+ KT+KN IQW+G L T + E ++E+ +L +E R+DQ +A G+L+ T+ + + DI L C+ TV+ +RAPAGTTLEVPDPD+G+ G +R+QI LKS PIDV Sbjct: 64 TRFDSSLGLLTRRFVDLIQAAPGGTLDLNAAAKDLDVQKRRIYDITNVLEGIGLIHKTSKNHIQWKGKGDGLGEGNTEEENEAQEEIHELVDQEARVDQLIAHVKGQLKKLPTESNKPSGDMFLHQ--QDIRGLPCYKKNTVMAIRAPAGTTLEVPDPDEGMPHGERRYQIYLKSPSGPIDV 243
BLAST of mRNA_M-pyrifera_M_contig106135.1329.1 vs. uniprot
Match: UPI001CB8CAAB (transcription factor E2FB isoform X1 n=2 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8CAAB) HSP 1 Score: 154 bits (390), Expect = 1.690e-41 Identity = 84/177 (47.46%), Postives = 113/177 (63.84%), Query Frame = 1 Query: 61 RFESSLALLTQRFTALVKNHVAQPLDLNTAAQILRVQKRRIYDITNVLEGIGLLDKTTKNAIQWRGTACLNASATAQLEEVRQEVQQLKAEEERLDQQVALALGELQTDKRREDAQPLSYTIASDIYKLRCFAGKTVLVVRAPAGTTLEVPDPDDGVETGFKRFQIVLKSAGAPIDV 591 R++SSL LLT++F L+K+ LDLN AA+ L VQKRRIYDITNVLEGIGL++K KN IQW+G N + ++ EV+ L AEE RLD+Q L+ E+ Q + DI L CF +T++ ++AP GTTLEVPDPD+ V+ +R++IVL+S PIDV Sbjct: 132 RYDSSLGLLTKKFINLIKHAEDGMLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDASNGEVDGNVTSLQAEVENLLAEELRLDEQTREMQERLRDLSEDENNQKFLFVTEEDIKNLPCFRDETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDV 308
BLAST of mRNA_M-pyrifera_M_contig106135.1329.1 vs. uniprot
Match: D8SK88_SELML (Uncharacterized protein E2F1-1 n=7 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SK88_SELML) HSP 1 Score: 151 bits (381), Expect = 2.570e-41 Identity = 85/183 (46.45%), Postives = 116/183 (63.39%), Query Frame = 1 Query: 49 PRGSRFESSLALLTQRFTALVKNHVAQPLDLNTAAQILRVQKRRIYDITNVLEGIGLLDKTTKNAIQWRGT--ACLNASATAQLEEVRQEVQQLKAEEERLDQQVALALGELQTDKRREDAQPLSYTIASDIYKLRCFAGKTVLVVRAPAGTTLEVPDPDDGVETGFKRFQIVLKSAGAPIDV 591 P R++SSL LLT++F L+ LDLN AA L VQKRRIYDITNVLEGIGL++K KN I+W+G + ++ +T L ++ EV L A+EE LD+++ +L+T Q Y DI L CF +T++ ++AP GTTLEVPDPD+ VE +R+QI+L+SA PIDV Sbjct: 35 PSTCRYDSSLGLLTKKFINLIDQAEDGVLDLNNAADTLHVQKRRIYDITNVLEGIGLIEKKLKNRIRWKGLGLSVADSDSTGLLSSLQSEVDDLHAQEESLDEKIRAMREKLKTMCEDVSNQQWLYVTEDDIKGLPCFQNETLIAIKAPQGTTLEVPDPDEAVEYPQRRYQILLRSAFGPIDV 217
BLAST of mRNA_M-pyrifera_M_contig106135.1329.1 vs. uniprot
Match: U5D432_AMBTC (E2F_TDP domain-containing protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=U5D432_AMBTC) HSP 1 Score: 153 bits (386), Expect = 4.090e-41 Identity = 87/181 (48.07%), Postives = 118/181 (65.19%), Query Frame = 1 Query: 61 RFESSLALLTQRFTALVKNHVAQPLDLNTAAQILRVQKRRIYDITNVLEGIGLLDKTTKNAIQWRGTACLNASATAQLEE----VRQEVQQLKAEEERLDQQVALALGELQTDKRREDAQPLSYTIASDIYKLRCFAGKTVLVVRAPAGTTLEVPDPDDGVETGFKRFQIVLKSAGAPIDV 591 R++SSL LLT++F L+K LDLN AA+IL VQKRRIYDITNVLEGIGL++K KN I+W+G L+ S +++E ++ EVQ L EE R+D+Q+ L+ E+ Q Y DI L CF +T++ ++AP GTTLEVPDPD+ VE +R+QI+L+S PIDV Sbjct: 138 RYDSSLGLLTKKFINLIKQAEDGVLDLNKAAEILEVQKRRIYDITNVLEGIGLIEKKLKNRIRWKG---LDVSRPGEVDEDIAVLQAEVQNLHLEEHRIDEQIREMQKSLRDLSEDENNQKWLYVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVEYPQRRYQILLRSTMGPIDV 315
BLAST of mRNA_M-pyrifera_M_contig106135.1329.1 vs. uniprot
Match: A0A5J4Y413_9CHLO (Transcription factor E2FB-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y413_9CHLO) HSP 1 Score: 150 bits (378), Expect = 4.440e-41 Identity = 94/182 (51.65%), Postives = 118/182 (64.84%), Query Frame = 1 Query: 61 RFESSLALLTQRFTALVKNHVAQPLDLNTAAQILRVQKRRIYDITNVLEGIGLLDKTTKNAIQWRGTACLNASATAQLEE---VRQEVQQLKAEEERLDQQVALALGELQTDKRREDAQPLS-YTIASDIYKLRCFAGKTVLVVRAPAGTTLEVPDPDDGVETGFKRFQIVLKS-AGAPIDV 591 R++SSL LLT++F LV+ LDLN AA L VQKRRIYDITNVLEGIGL++K KN IQW+G + +A AT L E +RQE+ L+ +E+ L + + AL + D + A Y DI KL C A TV V+AP GTTLEVPDPDDG+ETG +R++IVLKS PIDV Sbjct: 32 RYDSSLGLLTKKFVNLVEAAPDGVLDLNKAADALAVQKRRIYDITNVLEGIGLIEKKLKNNIQWKGGS--SADATDNLPEQAALRQEISNLQEDEQNLKRHIT-ALEDSIKDMTEDAANSARLYVTDEDIAKLPCTANDTVFAVKAPQGTTLEVPDPDDGLETGQRRYRIVLKSNCDTPIDV 210
BLAST of mRNA_M-pyrifera_M_contig106135.1329.1 vs. uniprot
Match: A0A484EDS3_BRELC (E2F_TDP domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDS3_BRELC) HSP 1 Score: 151 bits (381), Expect = 4.550e-41 Identity = 84/186 (45.16%), Postives = 120/186 (64.52%), Query Frame = 1 Query: 58 SRFESSLALLTQRFTALVKNHVAQPLDLNTAAQILRVQKRRIYDITNVLEGIGLLDKTTKNAIQWRGTACLNASATAQ--LEEVRQEVQQLKAEEERLDQQVALALGELQTDKRREDA------QPLSYTIASDIYKLRCFAGKTVLVVRAPAGTTLEVPDPDDGVETGFKRFQIVLKSAGAPIDV 591 SR+++SL LLT+RF L++ ++ LDLNTAA+ L VQKRRIYDITNVLEGIGL++KT+KN I W+G + + S ++ +RQ + L+ EE + DQ + ++ EDA + Y D+ + FA ++V+ ++AP GTTLEVPDPD+G+E G +RFQI LKS P+DV Sbjct: 66 SRYDNSLGLLTKRFVELIQAVPSKDLDLNTAAESLGVQKRRIYDITNVLEGIGLIEKTSKNNIHWKGASGRSGSTDTYQGMDHLRQNISDLRQEELKYDQHIKTVSQSIR-QLYEEDAFDKGSFENFCYVTHDDMRRQESFADQSVMAIKAPPGTTLEVPDPDEGMEAGERRFQIFLKSTEGPVDV 250
BLAST of mRNA_M-pyrifera_M_contig106135.1329.1 vs. uniprot
Match: A0A5A7P3J8_STRAF (Transcription factor n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7P3J8_STRAF) HSP 1 Score: 152 bits (385), Expect = 9.410e-41 Identity = 85/179 (47.49%), Postives = 120/179 (67.04%), Query Frame = 1 Query: 61 RFESSLALLTQRFTALVKNHVAQPLDLNTAAQILRVQKRRIYDITNVLEGIGLLDKTTKNAIQWRGTACLN-ASATAQLEEVRQEVQQLKAEEERLDQQVALALGELQTD-KRREDAQPLSYTIASDIYKLRCFAGKTVLVVRAPAGTTLEVPDPDDGVETGFKRFQIVLKSAGAPIDV 591 R++SSL+LLT++FT L+K+ +DLN AA L VQKRRIYDITNVLEGIGL++K KN IQW+G A A + +R+E+Q LK EE+ LD+++ + E+ TD E+ Q + DI L CF +T++ ++AP GTTLEVPDPD+ V+ +R++I+L+S PIDV Sbjct: 124 RYDSSLSLLTKKFTDLIKHAEDGIIDLNNAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGADVSRPAQAQGNISGLRKEIQNLKMEEQGLDKRIR-EMQEILTDLSEDENNQRWLFVTEEDIKNLPCFQNQTLIAIKAPHGTTLEVPDPDETVDYSQRRYRIILRSTMGPIDV 301 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106135.1329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106135.1329.1 >prot_M-pyrifera_M_contig106135.1329.1 ID=prot_M-pyrifera_M_contig106135.1329.1|Name=mRNA_M-pyrifera_M_contig106135.1329.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=197bp PRGAAGSGKAAPAGRKPRGSRFESSLALLTQRFTALVKNHVAQPLDLNTAback to top mRNA from alignment at M-pyrifera_M_contig106135:2..592- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106135.1329.1 ID=mRNA_M-pyrifera_M_contig106135.1329.1|Name=mRNA_M-pyrifera_M_contig106135.1329.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=591bp|location=Sequence derived from alignment at M-pyrifera_M_contig106135:2..592- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106135:2..592- >mRNA_M-pyrifera_M_contig106135.1329.1 ID=mRNA_M-pyrifera_M_contig106135.1329.1|Name=mRNA_M-pyrifera_M_contig106135.1329.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1182bp|location=Sequence derived from alignment at M-pyrifera_M_contig106135:2..592- (Macrocystis pyrifera P11B4 male)back to top |