mRNA_M-pyrifera_M_contig106127.1324.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106127.1324.1 vs. uniprot
Match: L8H2D6_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H2D6_ACACA) HSP 1 Score: 169 bits (428), Expect = 2.990e-50 Identity = 87/154 (56.49%), Postives = 111/154 (72.08%), Query Frame = 1 Query: 1 FALRHLGMRNGVECWIAGLVGGYVGFGESKGISGAVNNQIVLYLFARGIQGLFVTAVDKGVLPPAMDIRKGRGFRCLAAFSLALILYLTDYQAHNLSRGFMATMDNLYYDSNE--GPMLPPANFAPFVAVVMLSLLAPLAPSLSLDNLLSFVDR 456 + LR +G+ G+ECWIAG FG+SKG+SG+VNNQIVLYLFARGI GL V+ V +GV+P +D+R RGFR A FSLALILYLT+Y+ L+ FMATM+NLYYDS P+LP F PF A+ LSLL+PL PSL+L+++L + R Sbjct: 55 YILRRMGVDGGLECWIAG-------FGDSKGLSGSVNNQIVLYLFARGIYGLLVSGVRRGVIPQTLDVRSERGFRIFAGFSLALILYLTEYEPDTLNPSFMATMNNLYYDSETLPQPLLPAKRFVPFAALATLSLLSPLFPSLTLESMLGRILR 201
BLAST of mRNA_M-pyrifera_M_contig106127.1324.1 vs. uniprot
Match: A0A2P6N0S2_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N0S2_9EUKA) HSP 1 Score: 167 bits (422), Expect = 5.990e-49 Identity = 83/147 (56.46%), Postives = 108/147 (73.47%), Query Frame = 1 Query: 10 RHLGMRNGVECWIAGLVGGYVGFGESKGISGAVNNQIVLYLFARGIQGLFVTAVDKGVLPPAMDIRKGRGFRCLAAFSLALILYLTDYQAHNLSRGFMATMDNLYYDSNEGPMLPP--ANFAPFVAVVMLSLLAPLAPSLSLDNLLS 444 R++G+ GV+ WIAG +GGY FG++KGISG+VNNQIVLYLFARG+QG ++ V++GV+P MD+R GFR LA FSLALILYLT+Y+ LS F TMD LYYDS+ GPM+ A F PF+ + +SLL PL SL L+ +L+ Sbjct: 97 RNVGVSGGVDSWIAGFIGGYWAFGDNKGISGSVNNQIVLYLFARGLQGALISGVERGVIPKKMDVRTPGGFRILAGFSLALILYLTEYEPKTLSTAFWRTMDYLYYDSDSGPMMTSVEAKFIPFIIMGSVSLLYPLRESLGLEQMLA 243
BLAST of mRNA_M-pyrifera_M_contig106127.1324.1 vs. uniprot
Match: A0A6A5BW36_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BW36_NAEFO) HSP 1 Score: 166 bits (421), Expect = 7.350e-47 Identity = 87/149 (58.39%), Postives = 104/149 (69.80%), Query Frame = 1 Query: 10 RHLGMRNGVECWIAGLVGGYVGFGESKGISGAVNNQIVLYLFARGIQGLFVTAVDKGVLPPAMDIRKGRGFRCLAAFSLALILYLTDYQAHNLSRGFMATMDNLYYDSNEGPMLPPANFAPFVAVVMLSLLAPL-APSLSLDNLLSFVD 453 HL +R+G++ WIAG +GGYV FGESKGISGAVNNQIVLYLFARGI G G +P MDI GFR A FSLALILYLTDYQ+ +L GFM+TM++LY++SN+G + NFAPFV VV L LL P L L+N+L D Sbjct: 257 NHLNIRSGIDAWIAGFIGGYVAFGESKGISGAVNNQIVLYLFARGIDGGLRALATNGYIPEWMDITTPVGFRLFAGFSLALILYLTDYQSSSLRSGFMSTMEHLYHESNKGTLRTEVNFAPFVTVVTLCLLLGYWFPQLRLENVLQVTD 405
BLAST of mRNA_M-pyrifera_M_contig106127.1324.1 vs. uniprot
Match: UPI001CFD6898 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD6898) HSP 1 Score: 166 bits (420), Expect = 1.170e-46 Identity = 89/149 (59.73%), Postives = 102/149 (68.46%), Query Frame = 1 Query: 10 RHLGMRNGVECWIAGLVGGYVGFGESKGISGAVNNQIVLYLFARGIQGLFVTAVDKGVLPPAMDIRKGRGFRCLAAFSLALILYLTDYQAHNLSRGFMATMDNLYYDSNEGPMLPPANFAPFVAVVMLSLLAPL-APSLSLDNLLSFVD 453 L +RNG++ WIAG +GGYV FGESKGISGAVNNQIVLYLFARGI G G +P MDI GFR A FSLALILYLTDYQ +L GFM TM++LY++SN+G + NFAPFV VV L LL P L LDN+L VD Sbjct: 263 NQLHIRNGIDSWIAGFIGGYVAFGESKGISGAVNNQIVLYLFARGIDGGLRALATNGYIPEWMDITTPVGFRLFAGFSLALILYLTDYQPSSLRSGFMTTMEHLYHESNKGTLRTEVNFAPFVTVVTLCLLLGYWFPQLRLDNVLQVVD 411
BLAST of mRNA_M-pyrifera_M_contig106127.1324.1 vs. uniprot
Match: D2VCK1_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VCK1_NAEGR) HSP 1 Score: 154 bits (390), Expect = 8.820e-44 Identity = 82/149 (55.03%), Postives = 99/149 (66.44%), Query Frame = 1 Query: 10 RHLGMRNGVECWIAGLVGGYVGFGESKGISGAVNNQIVLYLFARGIQGLFVTAVDKGVLPPAMDIRKGRGFRCLAAFSLALILYLTDYQAHNLSRGFMATMDNLYYDSNEGPMLPPANFAPFVAVVMLSLLAPL-APSLSLDNLLSFVD 453 +L +RNG++ +AG VGG + FGESKGISGAVNNQIVLYLFARGI G KG +P MDI GFR A FSLAL+LYLTD+Q L GFM+TM LY++SN+G M P NFAPFV + + LL P L+N+L VD Sbjct: 112 NYLNVRNGLDALLAGFVGGSIAFGESKGISGAVNNQIVLYLFARGIDGGLKALATKGYIPEIMDISTPNGFRLFAGFSLALVLYLTDHQPRALKSGFMSTMKYLYHESNDGTMSVPINFAPFVTFITICLLLGYWFPQFRLENVLQRVD 260
BLAST of mRNA_M-pyrifera_M_contig106127.1324.1 vs. uniprot
Match: F0Z906_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z906_DICPU) HSP 1 Score: 140 bits (353), Expect = 1.700e-38 Identity = 67/147 (45.58%), Postives = 102/147 (69.39%), Query Frame = 1 Query: 10 RHLGMRNGVECWIAGLVGGYVGFGESKGISGAVNNQIVLYLFARGIQGLFVTAVDKGVLPPAMDIRKGRGFRCLAAFSLALILYLTDYQAHNLSRGFMATMDNLYYDSNEGPMLPPAN--FAPFVAVVMLSLLAPLAPSLSLDNLLS 444 RH G++ G++ +AG VGGY+ FG+SK +SG+VNNQIVLYLFAR + G+ V + ++P + +GFR AA +LALILYLT+Y+ L++GFM TM LY+ S+ GP+ + F P ++++++SL+ + P LSLDN+L+ Sbjct: 102 RHFGIKGGIDSLVAGFVGGYIAFGDSKSVSGSVNNQIVLYLFARALIGIIQGMVKRKIIPQTLSTTTPKGFRIFAAVTLALILYLTEYEPDTLNQGFMGTMTVLYHKSDSGPIFEKDDNKFLPILSLIVISLIGSVYPKLSLDNILT 248
BLAST of mRNA_M-pyrifera_M_contig106127.1324.1 vs. uniprot
Match: UPI000644D0FD (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644D0FD) HSP 1 Score: 140 bits (353), Expect = 4.090e-38 Identity = 72/152 (47.37%), Postives = 103/152 (67.76%), Query Frame = 1 Query: 10 RHLGMRNGVECWIAGLVGGYVGFGESKGISGAVNNQIVLYLFARGIQGLFVTAVDKGVLPPAMDIRKGRGFRCLAAFSLALILYLTDYQAHNLSRGFMATMDNLYYDSNEGPMLPPAN--FAPFVAVVMLSLLAPLAPSLSLDNLLSFVDRI 459 R++G++ GVE IAG VGGY FG+SK SG+VNNQIVLYLFAR + G + V + ++P + +GFR A +LA+ILYLT+Y+ L+ FM+TM LY+ S+ GPMLP + F+P + VV++SLL PSL L+N+L+ V ++ Sbjct: 136 RNIGVKGGVESLIAGFVGGYYAFGDSKSTSGSVNNQIVLYLFARALIGFIQSGVKRKIIPETLSTTTPQGFRIFAGVTLAMILYLTEYEPDTLNPSFMSTMTYLYHKSDSGPMLPADDKKFSPIILVVLVSLLGVYFPSLQLENILTNVFKL 287
BLAST of mRNA_M-pyrifera_M_contig106127.1324.1 vs. uniprot
Match: A0A8J4Q4S1_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q4S1_9MYCE) HSP 1 Score: 135 bits (339), Expect = 2.080e-36 Identity = 66/147 (44.90%), Postives = 99/147 (67.35%), Query Frame = 1 Query: 10 RHLGMRNGVECWIAGLVGGYVGFGESKGISGAVNNQIVLYLFARGIQGLFVTAVDKGVLPPAMDIRKGRGFRCLAAFSLALILYLTDYQAHNLSRGFMATMDNLYYDSNEGPMLPPAN--FAPFVAVVMLSLLAPLAPSLSLDNLLS 444 RH G++ GVE IAG VGGY+ FGESK SG+VNNQIVLYLFAR + G V + ++P + +GF+ A +LA+ILYLT+Y+ L+ FM+TM LY+ S+ GP++ A+ F P + ++++SLL + P+ SL+++L+ Sbjct: 101 RHFGIKGGVESLIAGFVGGYIAFGESKSTSGSVNNQIVLYLFARALIGFIQGFVKRKIIPENLSTTHPQGFKIFAGVTLAMILYLTEYEPETLNPAFMSTMTTLYHKSDSGPLMEKADQKFLPVIMIILISLLGSVFPAFSLESILT 247
BLAST of mRNA_M-pyrifera_M_contig106127.1324.1 vs. uniprot
Match: Q55FL0_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q55FL0_DICDI) HSP 1 Score: 134 bits (336), Expect = 6.020e-36 Identity = 66/146 (45.21%), Postives = 99/146 (67.81%), Query Frame = 1 Query: 7 LRHLGMRNGVECWIAGLVGGYVGFGESKGISGAVNNQIVLYLFARGIQGLFVTAVDKGVLPPAMDIRKGRGFRCLAAFSLALILYLTDYQAHNLSRGFMATMDNLYYDSNEGPMLPPAN--FAPFVAVVMLSLLAPLAPSLSLDNL 438 LR++G++ G++ +AG +GGY FGESK +SG+VNNQIVLYLFAR + G+ V + ++P ++ +GFR AA +LALILYLT+Y+ NL+ FM TM LY+ S+ GPM+ + F + +++LSL + P LSLD++ Sbjct: 101 LRNIGIKGGIDSLVAGFIGGYYAFGESKSVSGSVNNQIVLYLFARALIGIIQGMVKRKIIPQSLSTTTPKGFRIFAAVTLALILYLTEYEPENLNASFMGTMTVLYHKSDSGPMIEKGDHKFGIPMIIIILSLFGGIFPKLSLDSM 246
BLAST of mRNA_M-pyrifera_M_contig106127.1324.1 vs. uniprot
Match: F4Q353_CAVFA (Transmembrane protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q353_CAVFA) HSP 1 Score: 135 bits (341), Expect = 5.360e-34 Identity = 67/148 (45.27%), Postives = 100/148 (67.57%), Query Frame = 1 Query: 10 RHLGMRNGVECWIAGLVGGYVGFGESKGISGAVNNQIVLYLFARGIQGLFVTAVDKGVLPPAMDIRKGRGFRCLAAFSLALILYLTDYQAHNLSRGFMATMDNLYYDSNEGPMLPPAN--FAPFVAVVMLSLLAPLA-PSLSLDNLLS 444 R++G++ G++ +AG +GGYV FG+SK SG+VNNQIVLYLFAR + G+ + V + ++P + +GFR A +LALILYLT+Y+ L+ FM TM LY+ S+ GPMLP + F+P + V+++S+ P LSLDN+L+ Sbjct: 675 RNIGIKGGIDSLVAGFIGGYVAFGDSKSTSGSVNNQIVLYLFARALIGIIQSGVKRNIIPQQLSTTTPQGFRIFAGVTLALILYLTEYEPDTLNSSFMGTMTYLYHKSDSGPMLPQEDRKFSPIILVILISIATSWKFPQLSLDNILA 822 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106127.1324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106127.1324.1 >prot_M-pyrifera_M_contig106127.1324.1 ID=prot_M-pyrifera_M_contig106127.1324.1|Name=mRNA_M-pyrifera_M_contig106127.1324.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp MRNGVECWIAGLVGGYVGFGESKGISGAVNNQIVLYLFARGIQGLFVTAVback to top mRNA from alignment at M-pyrifera_M_contig106127:3..482+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106127.1324.1 ID=mRNA_M-pyrifera_M_contig106127.1324.1|Name=mRNA_M-pyrifera_M_contig106127.1324.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=480bp|location=Sequence derived from alignment at M-pyrifera_M_contig106127:3..482+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106127:3..482+ >mRNA_M-pyrifera_M_contig106127.1324.1 ID=mRNA_M-pyrifera_M_contig106127.1324.1|Name=mRNA_M-pyrifera_M_contig106127.1324.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig106127:3..482+ (Macrocystis pyrifera P11B4 male)back to top |