mRNA_M-pyrifera_M_contig106076.1319.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106076.1319.1 vs. uniprot
Match: A0A518A3I3_9PLAN (Phenylalanine--tRNA ligase beta subunit n=9 Tax=Gimesia TaxID=1649453 RepID=A0A518A3I3_9PLAN) HSP 1 Score: 365 bits (937), Expect = 2.730e-119 Identity = 183/188 (97.34%), Postives = 186/188 (98.94%), Query Frame = 1 Query: 1 DAVAVEIADDSLCSRYTCQVFDSVQVRKSPHWLQSRLQTAGLRAINNVVDITNFVMLEWGQPMHAFDFDSLKGNKIEVRRIKEGETLKLLDETEVDAKEQPLVIADGEKPIALAGIMGGADSQTTAESKRILLESACFDPVCIRTSSRKLKISTDSSYRFERGTDPNGMLSGAFNRAAELLQDPELAG 564 DAVAV+IADDSLCSRYTCQVFD VQVRKSPHWLQSRLQTAGLRAINNVVDITNFVMLEWGQP+HAFDFDSLKGNKIEVRRIK GETLKLLDETEVDAKEQPLVIADGEKPIALAGIMGGADSQTTAESKRILLESACFDPVCIRTSSRKLKISTDSSYRFERGTDPNGMLSGAFNRAAELLQDPEL+G Sbjct: 203 DAVAVKIADDSLCSRYTCQVFDGVQVRKSPHWLQSRLQTAGLRAINNVVDITNFVMLEWGQPLHAFDFDSLKGNKIEVRRIKAGETLKLLDETEVDAKEQPLVIADGEKPIALAGIMGGADSQTTAESKRILLESACFDPVCIRTSSRKLKISTDSSYRFERGTDPNGMLSGAFNRAAELLQDPELSG 390
BLAST of mRNA_M-pyrifera_M_contig106076.1319.1 vs. uniprot
Match: A0A517WXH0_9PLAN (Phenylalanine--tRNA ligase beta subunit n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WXH0_9PLAN) HSP 1 Score: 326 bits (836), Expect = 2.940e-104 Identity = 160/187 (85.56%), Postives = 175/187 (93.58%), Query Frame = 1 Query: 1 DAVAVEIADDSLCSRYTCQVFDSVQVRKSPHWLQSRLQTAGLRAINNVVDITNFVMLEWGQPMHAFDFDSLKGNKIEVRRIKEGETLKLLDETEVDAKEQPLVIADGEKPIALAGIMGGADSQTTAESKRILLESACFDPVCIRTSSRKLKISTDSSYRFERGTDPNGMLSGAFNRAAELLQDPELA 561 ++VAVEIAD++LCSRYTCQVFD+VQ+R SPHW+QSRLQTAGLR INNVVDITNFVMLEWGQP+HAFDFDSLKGN+IEVRRI++ E LKLLDE EVD QPLVIAD EKPIALAGIMGG DSQTT ESKRILLE+ACFDPVCIRTSSRKL+ISTDSSYRFERGTDPNGMLSGAFNRAA+LLQD EL+ Sbjct: 204 ESVAVEIADETLCSRYTCQVFDNVQIRTSPHWMQSRLQTAGLRPINNVVDITNFVMLEWGQPLHAFDFDSLKGNRIEVRRIRKTEKLKLLDEAEVDGTHQPLVIADAEKPIALAGIMGGWDSQTTTESKRILLEAACFDPVCIRTSSRKLRISTDSSYRFERGTDPNGMLSGAFNRAAQLLQDSELS 390
BLAST of mRNA_M-pyrifera_M_contig106076.1319.1 vs. uniprot
Match: A6C5R4_9PLAN (Phenylalanine--tRNA ligase beta subunit n=10 Tax=Planctomycetaceae TaxID=126 RepID=A6C5R4_9PLAN) HSP 1 Score: 326 bits (835), Expect = 4.040e-104 Identity = 161/187 (86.10%), Postives = 172/187 (91.98%), Query Frame = 1 Query: 1 DAVAVEIADDSLCSRYTCQVFDSVQVRKSPHWLQSRLQTAGLRAINNVVDITNFVMLEWGQPMHAFDFDSLKGNKIEVRRIKEGETLKLLDETEVDAKEQPLVIADGEKPIALAGIMGGADSQTTAESKRILLESACFDPVCIRTSSRKLKISTDSSYRFERGTDPNGMLSGAFNRAAELLQDPELA 561 DAV V+I D+SLCSRYTCQVFD VQVR SPHWLQSRLQTAGLR INNVVDITNFVMLEWGQP+HAFDFDSL GN+IEVRRI+ GE LKLLDE EVDA +PLVIADGEKPIALAGIMGG DSQTT +SKRILLE+ACFDPVCIRTS+RKL+I TDSSYRFERGTDPNGMLSGAFNRAAELLQD EL+ Sbjct: 204 DAVTVKILDESLCSRYTCQVFDGVQVRTSPHWLQSRLQTAGLRPINNVVDITNFVMLEWGQPLHAFDFDSLTGNQIEVRRIRNGEKLKLLDEAEVDATHEPLVIADGEKPIALAGIMGGWDSQTTTDSKRILLEAACFDPVCIRTSARKLRIGTDSSYRFERGTDPNGMLSGAFNRAAELLQDAELS 390
BLAST of mRNA_M-pyrifera_M_contig106076.1319.1 vs. uniprot
Match: A0A518I9E3_9PLAN (Phenylalanine--tRNA ligase beta subunit n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I9E3_9PLAN) HSP 1 Score: 323 bits (827), Expect = 6.320e-103 Identity = 162/187 (86.63%), Postives = 172/187 (91.98%), Query Frame = 1 Query: 1 DAVAVEIADDSLCSRYTCQVFDSVQVRKSPHWLQSRLQTAGLRAINNVVDITNFVMLEWGQPMHAFDFDSLKGNKIEVRRIKEGETLKLLDETEVDAKEQPLVIADGEKPIALAGIMGGADSQTTAESKRILLESACFDPVCIRTSSRKLKISTDSSYRFERGTDPNGMLSGAFNRAAELLQDPELA 561 ++VAVEI D SLCSRY CQVFD VQVR SPHWLQSRLQTAGLR INNVVDITNFVMLEWGQP+HAFDFDSLKGN+IEVRRI++ E LKLLDETEVD EQPLVIAD EKPIALAGIMGG +SQTTA SKRILLE+ACFDPVCIRTSSRKL+ISTDSSYRFERGTDPN MLSGAFNRAAELLQD EL+ Sbjct: 204 ESVAVEIDDASLCSRYACQVFDGVQVRSSPHWLQSRLQTAGLRPINNVVDITNFVMLEWGQPLHAFDFDSLKGNRIEVRRIRQDEKLKLLDETEVDGAEQPLVIADAEKPIALAGIMGGWNSQTTAGSKRILLEAACFDPVCIRTSSRKLRISTDSSYRFERGTDPNDMLSGAFNRAAELLQDAELS 390
BLAST of mRNA_M-pyrifera_M_contig106076.1319.1 vs. uniprot
Match: A0A382MAD8_9ZZZZ (B5 domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382MAD8_9ZZZZ) HSP 1 Score: 197 bits (501), Expect = 4.210e-59 Identity = 105/188 (55.85%), Postives = 133/188 (70.74%), Query Frame = 1 Query: 1 DAVAVEIADDSLCSRYTCQVFDSVQVRKSPHWLQSRLQTAGLRAINNVVDITNFVMLEWGQPMHAFDFDSLKGNKIEVRRIKEGETLKLLDETEVDAKEQPLVIADGEKPIALAGIMGGADSQTTAESKRILLESACFDPVCIRTSSRKLKISTDSSYRFERGTDPNGMLSGAFNRAAELLQDPELAG 564 D V+VE + LC RY V ++V+V SP WL+ RL GLR INN+VDITNFVM+++GQP+HAFD D L GNKI +RR K+GE LD TE+ + LVIADGEKP+ALAGIMGG SQ + + I+LESACFDP +R S+K + +DSSYRFERG D NG++S A RAA +++ ELAG Sbjct: 98 DRVSVENLEPELCPRYCALVIENVKVGPSPKWLKDRLTAIGLRPINNIVDITNFVMMDYGQPLHAFDRDLLAGNKIIIRRAKKGEPFASLDGTELKLEPDALVIADGEKPVALAGIMGGTKSQVSETTCHIVLESACFDPATVRKGSKKYGLRSDSSYRFERGVDWNGVVS-AQARAALMIK--ELAG 282
BLAST of mRNA_M-pyrifera_M_contig106076.1319.1 vs. uniprot
Match: A0A6N9IZD6_9BACT (Phenylalanine--tRNA ligase beta subunit n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A6N9IZD6_9BACT) HSP 1 Score: 203 bits (517), Expect = 1.590e-58 Identity = 106/188 (56.38%), Postives = 136/188 (72.34%), Query Frame = 1 Query: 1 DAVAVEIADDSLCSRYTCQVFDSVQVRKSPHWLQSRLQTAGLRAINNVVDITNFVMLEWGQPMHAFDFDSLKGNKIEVRRIKEGETLKLLDETEVDAKEQPLVIADGEKPIALAGIMGGADSQTTAESKRILLESACFDPVCIRTSSRKLKISTDSSYRFERGTDPNGMLSGAFNRAAELLQDPELAG 564 D V+VE + LC RY V ++++V SP WLQ RL GLR INN+VD+TNFVM+E+GQP+HAFD D LK NKI +RR +GE+ LD TE+ + LVIADGEKP+ALAGIMGG +SQ + ++ I+LESACFDPV +R S+K + +DSSYRFERG D NG++S A RAA L++ ELAG Sbjct: 98 DRVSVENQEPKLCPRYCALVIENIKVGPSPKWLQDRLTAIGLRPINNIVDVTNFVMMEYGQPLHAFDKDLLKDNKIIIRRANKGESFLSLDGTELKLDQDALVIADGEKPVALAGIMGGTNSQVSESTRHIVLESACFDPVTVRKGSKKYGLRSDSSYRFERGVDLNGVVS-AQARAALLMK--ELAG 282
BLAST of mRNA_M-pyrifera_M_contig106076.1319.1 vs. uniprot
Match: A0A3D1XQG5_9BACT (Phenylalanine--tRNA ligase subunit beta (Fragment) n=1 Tax=Nitrospina sp. TaxID=2024844 RepID=A0A3D1XQG5_9BACT) HSP 1 Score: 191 bits (484), Expect = 1.650e-58 Identity = 103/188 (54.79%), Postives = 132/188 (70.21%), Query Frame = 1 Query: 1 DAVAVEIADDSLCSRYTCQVFDSVQVRKSPHWLQSRLQTAGLRAINNVVDITNFVMLEWGQPMHAFDFDSLKGNKIEVRRIKEGETLKLLDETEVDAKEQPLVIADGEKPIALAGIMGGADSQTTAESKRILLESACFDPVCIRTSSRKLKISTDSSYRFERGTDPNGMLSGAFNRAAELLQDPELAG 564 + +AVE ++SLC RY V ++V+ SP WL RLQ GLR INN+VDITNFVM+E+GQP+HAFD + L GNKI +R +GE LD +E+ LVIAD EKP+ALAGIMGGA+SQ + +K I+LESACFD IR +S+K + +DSSYRFERG D G+++ A RAA L+Q ELAG Sbjct: 5 EKIAVENLEESLCPRYAALVIENVKPGPSPKWLCDRLQAIGLRPINNIVDITNFVMMEYGQPLHAFDRELLSGNKIIIRNANKGEKFTSLDGSELKLDVDALVIADEEKPVALAGIMGGANSQVSEATKNIVLESACFDSSAIRKASKKYGLRSDSSYRFERGVDMEGVIT-AQARAACLIQ--ELAG 189
BLAST of mRNA_M-pyrifera_M_contig106076.1319.1 vs. uniprot
Match: A0A2H0CPD5_9BACT (Phenylalanine--tRNA ligase beta subunit n=1 Tax=Nitrospinae bacterium CG22_combo_CG10-13_8_21_14_all_47_10 TaxID=1974050 RepID=A0A2H0CPD5_9BACT) HSP 1 Score: 200 bits (508), Expect = 3.480e-57 Identity = 106/188 (56.38%), Postives = 134/188 (71.28%), Query Frame = 1 Query: 1 DAVAVEIADDSLCSRYTCQVFDSVQVRKSPHWLQSRLQTAGLRAINNVVDITNFVMLEWGQPMHAFDFDSLKGNKIEVRRIKEGETLKLLDETEVDAKEQPLVIADGEKPIALAGIMGGADSQTTAESKRILLESACFDPVCIRTSSRKLKISTDSSYRFERGTDPNGMLSGAFNRAAELLQDPELAG 564 D +AVE + LC RY ++V+V SP WL+ RL GLR INN+VDITNFVM+E+GQP+HAFD D L GNKI +RR K+GE LD T++ +E LVIADGEKP+ALAGIMGG +SQ + + I+LESACFDP +R S+K + +DSSYRFERG D NG++S A RAA L++ ELAG Sbjct: 98 DRIAVENLEPELCPRYCALAIENVKVGPSPKWLKDRLVAIGLRPINNIVDITNFVMMEYGQPLHAFDRDLLVGNKIIIRRAKKGEPFSSLDGTQLKLEEDALVIADGEKPVALAGIMGGTNSQVSQTTCHIVLESACFDPATVRKGSKKYGLRSDSSYRFERGVDWNGVVS-AQARAALLMK--ELAG 282
BLAST of mRNA_M-pyrifera_M_contig106076.1319.1 vs. uniprot
Match: A0A1Y3QMZ7_9FIRM (Phenylalanine--tRNA ligase beta subunit n=1 Tax=Firmicutes bacterium ZCTH02-B6 TaxID=1861639 RepID=A0A1Y3QMZ7_9FIRM) HSP 1 Score: 200 bits (509), Expect = 8.830e-57 Identity = 102/187 (54.55%), Postives = 137/187 (73.26%), Query Frame = 1 Query: 4 AVAVEIADDSLCSRYTCQVFDSVQVRKSPHWLQSRLQTAGLRAINNVVDITNFVMLEWGQPMHAFDFDSLKGNKIEVRRIKEGETLKLLDETEVDAKEQPLVIADGEKPIALAGIMGGADSQTTAESKRILLESACFDPVCIRTSSRKLKISTDSSYRFERGTDPNGMLSGAFNRAAELLQDPELAG 564 A AVE+AD LC RYT +V V++ SP WL RL+ AG+R+INNVVDITNFVM EWGQP+HAFD+D+L+G +I VRR + GETL LD E E LVIAD E+P+ +AG+MGG +S+ T ++ +LLESA F PV +R ++R+L + T++S+RFE+G DPN + + A RAA+L+Q ELAG Sbjct: 204 ATAVEVADTELCPRYTARVMRQVRIGPSPAWLVQRLRVAGMRSINNVVDITNFVMWEWGQPLHAFDYDTLRGGRIIVRRARAGETLVTLDGVERPLDEDMLVIADAERPVGVAGVMGGGNSEVTEGTRAVLLESANFQPVSVRRTARRLGLRTEASHRFEKGLDPN-LAAVASLRAAQLIQ--ELAG 387
BLAST of mRNA_M-pyrifera_M_contig106076.1319.1 vs. uniprot
Match: A0A2E2ADC4_9BACT (Phenylalanine--tRNA ligase beta subunit n=1 Tax=Nitrospina sp. TaxID=2024844 RepID=A0A2E2ADC4_9BACT) HSP 1 Score: 197 bits (502), Expect = 2.610e-56 Identity = 103/188 (54.79%), Postives = 134/188 (71.28%), Query Frame = 1 Query: 1 DAVAVEIADDSLCSRYTCQVFDSVQVRKSPHWLQSRLQTAGLRAINNVVDITNFVMLEWGQPMHAFDFDSLKGNKIEVRRIKEGETLKLLDETEVDAKEQPLVIADGEKPIALAGIMGGADSQTTAESKRILLESACFDPVCIRTSSRKLKISTDSSYRFERGTDPNGMLSGAFNRAAELLQDPELAG 564 D ++VE + LC RY V ++++V SP WL+ RL GLR INN+VDITNFVM+E+GQP+HAFD D L GNKI +RR K+GE LD TE+ ++ LVIADG+KP+ALAGIMGG +SQ + + ++LESACFDP IR S+K + +DSSYRFERG D G++S A RAA L++ ELAG Sbjct: 98 DRLSVENLEPELCPRYCALVIENIKVGPSPKWLKDRLFAIGLRPINNIVDITNFVMMEYGQPLHAFDRDLLTGNKIVIRRAKKGELFSSLDGTELKLEQDSLVIADGDKPVALAGIMGGTNSQVSETTSHVVLESACFDPTTIRKGSKKYGLRSDSSYRFERGVDLKGVVS-AQARAALLIK--ELAG 282 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106076.1319.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106076.1319.1 >prot_M-pyrifera_M_contig106076.1319.1 ID=prot_M-pyrifera_M_contig106076.1319.1|Name=mRNA_M-pyrifera_M_contig106076.1319.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=188bp DAVAVEIADDSLCSRYTCQVFDSVQVRKSPHWLQSRLQTAGLRAINNVVDback to top mRNA from alignment at M-pyrifera_M_contig106076:4..567- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106076.1319.1 ID=mRNA_M-pyrifera_M_contig106076.1319.1|Name=mRNA_M-pyrifera_M_contig106076.1319.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig106076:4..567- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106076:4..567- >mRNA_M-pyrifera_M_contig106076.1319.1 ID=mRNA_M-pyrifera_M_contig106076.1319.1|Name=mRNA_M-pyrifera_M_contig106076.1319.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1128bp|location=Sequence derived from alignment at M-pyrifera_M_contig106076:4..567- (Macrocystis pyrifera P11B4 male)back to top |