mRNA_M-pyrifera_M_contig106061.1314.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106061.1314.1 vs. uniprot
Match: A0A5A8DKA1_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DKA1_CAFRO) HSP 1 Score: 122 bits (305), Expect = 3.170e-30 Identity = 54/96 (56.25%), Postives = 73/96 (76.04%), Query Frame = 1 Query: 4 SRFVDPPESAIDHENHTGQWVSNFRTIWDGRDDNTLV-IGAMGTRAVEFYDATSGKKVHEMADPDRLTAIPAINAVHPSKPLVLSGTASGRAHIWS 288 SRF DP AI H NHTG+W+SNFRT+++ +V +GAMGTR ++F+ + +GK +HE+ D ++LTA+P INA HPS PL+LS TASGRAH+WS Sbjct: 511 SRFADPAGVAIKHNNHTGRWLSNFRTVFEPLSGGHVVLVGAMGTRRIQFFSSFTGKLLHEVGDEEQLTAVPTINAFHPSLPLILSTTASGRAHLWS 606
BLAST of mRNA_M-pyrifera_M_contig106061.1314.1 vs. uniprot
Match: A0A482RS44_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RS44_9ARCH) HSP 1 Score: 91.3 bits (225), Expect = 6.040e-22 Identity = 44/90 (48.89%), Postives = 67/90 (74.44%), Query Frame = 1 Query: 31 AIDHENHTGQWVSNFRTIWDGRDDNTLVIGAMGTRAVEFYDATSGKKVHEMADPDRLTAIPAINAVHP--SKPLVLSGTASGRAHIWSVG 294 +IDH NHTG+W+S FRT +D +D+TL++G+M RAVE + + SGK++ + + LTA+P++NA+HP + ++SGTASGR H+WS G Sbjct: 6 SIDHNNHTGRWLSCFRTTFDPCNDDTLMVGSMD-RAVELFHSVSGKRLFAHSS-ELLTAVPSLNAMHPHHNASWIVSGTASGRMHLWSRG 93
BLAST of mRNA_M-pyrifera_M_contig106061.1314.1 vs. uniprot
Match: K7FRR7_PELSI (WD repeat-containing protein 76 n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7FRR7_PELSI) HSP 1 Score: 82.8 bits (203), Expect = 2.480e-16 Identity = 36/90 (40.00%), Postives = 61/90 (67.78%), Query Frame = 1 Query: 19 PPESAIDHENHTGQWVSNFRTIWDGRDDNTLVIGAMGT-RAVEFYDATSGKKVHEMADPDRLTAIPAINAVHPSKPLVLSGTASGRAHIW 285 P +AI H N+TG+W++ FR +WD + ++ V+G+M R +E + AT GK +H + D L ++ +INAVHP+K +++ G +SGR H++ Sbjct: 507 PVVTAIRHNNNTGRWLTRFRAVWDPKQEDCFVVGSMARPRQIEIFQAT-GKLLHSFYNEDYLGSVCSINAVHPTKNILVGGNSSGRLHVF 595
BLAST of mRNA_M-pyrifera_M_contig106061.1314.1 vs. uniprot
Match: A0A8C8VE13_9SAUR (WD repeat-containing protein 76 n=1 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8VE13_9SAUR) HSP 1 Score: 81.6 bits (200), Expect = 4.850e-16 Identity = 35/90 (38.89%), Postives = 63/90 (70.00%), Query Frame = 1 Query: 19 PPESAIDHENHTGQWVSNFRTIWDGRDDNTLVIGAMGT-RAVEFYDATSGKKVHEMADPDRLTAIPAINAVHPSKPLVLSGTASGRAHIW 285 P +AI H N+TG+W++ FR IWD + ++ +V+G+M R +E + AT G+++H + D L ++ +INA+HP+K +++ G +SGR H++ Sbjct: 314 PVLTAIKHNNNTGRWLTRFRAIWDPKQEDCIVVGSMARPRQIEVFQAT-GEQLHSFYNVDYLGSVCSINAMHPTKNILVGGNSSGRLHVF 402
BLAST of mRNA_M-pyrifera_M_contig106061.1314.1 vs. uniprot
Match: A0A4D9ECP5_9SAUR (WD repeat-containing protein 76 n=19 Tax=Durocryptodira TaxID=1579337 RepID=A0A4D9ECP5_9SAUR) HSP 1 Score: 79.3 bits (194), Expect = 4.100e-15 Identity = 34/90 (37.78%), Postives = 61/90 (67.78%), Query Frame = 1 Query: 19 PPESAIDHENHTGQWVSNFRTIWDGRDDNTLVIGAMGT-RAVEFYDATSGKKVHEMADPDRLTAIPAINAVHPSKPLVLSGTASGRAHIW 285 P +A+ H N+TG+W++ FR IWD + ++ V+G+M R +E + T G+++H + D L ++ +INAVHP+K +++ G +SGR H++ Sbjct: 542 PVLTAVRHNNNTGRWLTRFRAIWDPKQEDCFVVGSMARPRQIEIFQDT-GEQLHSFYNVDYLGSVCSINAVHPTKNILVGGNSSGRLHVF 630
BLAST of mRNA_M-pyrifera_M_contig106061.1314.1 vs. uniprot
Match: H3AEJ9_LATCH (WD repeat-containing protein 76 n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AEJ9_LATCH) HSP 1 Score: 78.2 bits (191), Expect = 1.040e-14 Identity = 33/86 (38.37%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 31 AIDHENHTGQWVSNFRTIWDGRDDNTLVIGAMGT-RAVEFYDATSGKKVHEMADPDRLTAIPAINAVHPSKPLVLSGTASGRAHIW 285 +I H N+TG+W++ FR +WD + +N V+G+M R +E + T G VH + D L ++ +INA+HPS+ +++ G +SGR H++ Sbjct: 549 SIRHNNYTGRWLTKFRAVWDPKQENCFVVGSMARPRQIEVFHDT-GSLVHNFMNEDYLGSVCSINAMHPSRNILVGGNSSGRVHVF 633
BLAST of mRNA_M-pyrifera_M_contig106061.1314.1 vs. uniprot
Match: WDR76_XENLA (WD repeat-containing protein 76 n=2 Tax=Xenopus laevis TaxID=8355 RepID=WDR76_XENLA) HSP 1 Score: 77.8 bits (190), Expect = 1.410e-14 Identity = 34/90 (37.78%), Postives = 59/90 (65.56%), Query Frame = 1 Query: 19 PPESAIDHENHTGQWVSNFRTIWDGRDDNTLVIGAMGT-RAVEFYDATSGKKVHEMADPDRLTAIPAINAVHPSKPLVLSGTASGRAHIW 285 P +A H N+TG+W++ FR +WD + ++ V+G+M R +E Y+ SGK H D + L ++ +INA+HP++ L++ G +SGR H++ Sbjct: 490 PLLTAFRHNNNTGRWLTRFRAVWDPKQESCFVVGSMARPRQIEVYNE-SGKLEHSFWDSEHLGSVCSINAMHPTRNLLVGGNSSGRLHVF 578
BLAST of mRNA_M-pyrifera_M_contig106061.1314.1 vs. uniprot
Match: UPI001454ECD3 (WD repeat-containing protein 76-like isoform X1 n=2 Tax=Asterias rubens TaxID=7604 RepID=UPI001454ECD3) HSP 1 Score: 77.4 bits (189), Expect = 1.930e-14 Identity = 30/88 (34.09%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 25 ESAIDHENHTGQWVSNFRTIW-DGRDDNTLVIGAMGTRAVEFYDATSGKKVHEMADPDRLTAIPAINAVHPSKPLVLSGTASGRAHIW 285 +++I H+NHTG+W+SNFR++W GR+D ++ + R ++ Y G +H + D + L ++ +INA HP++ +++ G +SG+ H++ Sbjct: 497 QTSISHDNHTGRWLSNFRSVWYPGREDAVIIGSMLRPRRIQVY-GEGGTLLHTLMDEESLGSVCSINACHPTRDIIVGGNSSGKLHVF 583
BLAST of mRNA_M-pyrifera_M_contig106061.1314.1 vs. uniprot
Match: A0A8C3J558_9CHAR (WD repeat-containing protein 76 n=1 Tax=Calidris pygmaea TaxID=425635 RepID=A0A8C3J558_9CHAR) HSP 1 Score: 76.3 bits (186), Expect = 4.230e-14 Identity = 32/83 (38.55%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 40 HENHTGQWVSNFRTIWDGRDDNTLVIGAMGT-RAVEFYDATSGKKVHEMADPDRLTAIPAINAVHPSKPLVLSGTASGRAHIW 285 H N+TG+W++ F+ +WD R ++ V+G++ R VE + T G+ +H +PD L+++ +INA+HPSK +++ G +SGR H++ Sbjct: 326 HNNNTGRWLTRFQAVWDPRREDCFVVGSLARPRQVEVFQDT-GELLHSFYNPDCLSSVCSINALHPSKNILVGGNSSGRLHVF 407
BLAST of mRNA_M-pyrifera_M_contig106061.1314.1 vs. uniprot
Match: A0A077WR73_9FUNG (DNA damage-binding protein CMR1 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A077WR73_9FUNG) HSP 1 Score: 76.3 bits (186), Expect = 4.610e-14 Identity = 40/93 (43.01%), Postives = 56/93 (60.22%), Query Frame = 1 Query: 28 SAIDHENHTGQWVSNFRTIWDGRDDNT----LVIGAMGTRAVEFYDATSGKKVHEMADPDRLTAIPAINAVHPS--KPLVLSGTASGRAHIWS 288 SAI H NHTG+WV+ FRT W+ T ++G M ++F+ +G+++ ++D DRLTAI A+ HPS K LV +G ASGR WS Sbjct: 365 SAIPHNNHTGKWVTMFRTRWNQNPAATRHQHFIVGNM-KHTIDFFSGETGQEICALSDRDRLTAIQAVAVFHPSTEKTLVATGNASGRMACWS 456 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106061.1314.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106061.1314.1 >prot_M-pyrifera_M_contig106061.1314.1 ID=prot_M-pyrifera_M_contig106061.1314.1|Name=mRNA_M-pyrifera_M_contig106061.1314.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp MSRFVDPPESAIDHENHTGQWVSNFRTIWDGRDDNTLVIGAMGTRAVEFYback to top mRNA from alignment at M-pyrifera_M_contig106061:243..548- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106061.1314.1 ID=mRNA_M-pyrifera_M_contig106061.1314.1|Name=mRNA_M-pyrifera_M_contig106061.1314.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=306bp|location=Sequence derived from alignment at M-pyrifera_M_contig106061:243..548- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106061:243..548- >mRNA_M-pyrifera_M_contig106061.1314.1 ID=mRNA_M-pyrifera_M_contig106061.1314.1|Name=mRNA_M-pyrifera_M_contig106061.1314.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig106061:243..548- (Macrocystis pyrifera P11B4 male)back to top |