mRNA_M-pyrifera_M_contig106059.1311.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig106059.1311.1
Unique NamemRNA_M-pyrifera_M_contig106059.1311.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig106059.1311.1 vs. uniprot
Match: A0A7Y2GLQ5_9ACTN (Pyridoxal 5'-phosphate synthase subunit PdxS n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GLQ5_9ACTN)

HSP 1 Score: 386 bits (991), Expect = 9.050e-134
Identity = 190/210 (90.48%), Postives = 206/210 (98.10%), Query Frame = 1 
Query:    1 KIAEDAGATSVMALERVPSDIRRDGGVSRMSDPEMIQGIQAAVSIPVMAKARIGHFAEAQILQSLGVDYIDESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNVVEAVRHLRSIMGDIRKIGQADNAELFDWAKQLQAPLPLVQEIAETGELPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS 630
            K+AEDAGA +VMALERVP+DIR DGGV+RMSDPEMI+GIQAAV+IPVMAKARIGHF EAQILQSLGVDY+DESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNV+EAVRHLRSI+GDIRKIGQAD+AELFDWAK+LQAP+PLVQEIAETGELPVP+FCAGG+ATPADA++ MQLGAQAVFVGSGIFKS
Sbjct:   38 KVAEDAGAVAVMALERVPADIRVDGGVARMSDPEMIEGIQAAVTIPVMAKARIGHFVEAQILQSLGVDYVDESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNVIEAVRHLRSILGDIRKIGQADSAELFDWAKRLQAPVPLVQEIAETGELPVPLFCAGGLATPADAAMAMQLGAQAVFVGSGIFKS 247
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BLAST of mRNA_M-pyrifera_M_contig106059.1311.1 vs. uniprot
Match: A0A6J5YAI4_9ZZZZ (Unannotated protein n=3 Tax=root TaxID=1 RepID=A0A6J5YAI4_9ZZZZ)

HSP 1 Score: 385 bits (989), Expect = 3.790e-133
Identity = 194/210 (92.38%), Postives = 203/210 (96.67%), Query Frame = 1 
Query:    1 KIAEDAGATSVMALERVPSDIRRDGGVSRMSDPEMIQGIQAAVSIPVMAKARIGHFAEAQILQSLGVDYIDESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNVVEAVRHLRSIMGDIRKIGQADNAELFDWAKQLQAPLPLVQEIAETGELPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS 630
            +IAEDAGA +VMALERVPSDIRRDGGV+RMSDPEMI+GI+A  +IPVMAKARIGHFAEAQILQSLGVDYIDESEVLTPADEAHHIDKWAFT PFVCGATNLGEALRRISEGACMIRSKGEAGTGNVVEAVRHLRSI+GDIRKIG AD+AELF+WAKQLQAPLPLVQEIA TG LPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS
Sbjct:   59 RIAEDAGAIAVMALERVPSDIRRDGGVARMSDPEMIEGIKAVTTIPVMAKARIGHFAEAQILQSLGVDYIDESEVLTPADEAHHIDKWAFTTPFVCGATNLGEALRRISEGACMIRSKGEAGTGNVVEAVRHLRSILGDIRKIGTADSAELFEWAKQLQAPLPLVQEIARTGTLPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS 268
[Close]
BLAST of mRNA_M-pyrifera_M_contig106059.1311.1 vs. uniprot
Match: A0A6B1B1N3_9ACTN (Pyridoxal 5'-phosphate synthase subunit PdxS n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B1N3_9ACTN)

HSP 1 Score: 384 bits (987), Expect = 3.950e-133
Identity = 193/210 (91.90%), Postives = 205/210 (97.62%), Query Frame = 1 
Query:    1 KIAEDAGATSVMALERVPSDIRRDGGVSRMSDPEMIQGIQAAVSIPVMAKARIGHFAEAQILQSLGVDYIDESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNVVEAVRHLRSIMGDIRKIGQADNAELFDWAKQLQAPLPLVQEIAETGELPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS 630
            KIAEDAGA +VMALERVPSDIR+DGGVSRMSDPEMI GIQAAVSIPVMAKARIGHFAEAQ+L+++GVDYIDESEVLTPADEAHHIDKWAFT+PFVCGATNLGEALRRISEGA MIRSKGEAGTGNVVEAVRHLRSI+GDI KI QAD+AELFDWAKQLQAPLPL+QEIA+TG+LPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS
Sbjct:   40 KIAEDAGAVAVMALERVPSDIRKDGGVSRMSDPEMIHGIQAAVSIPVMAKARIGHFAEAQMLEAIGVDYIDESEVLTPADEAHHIDKWAFTIPFVCGATNLGEALRRISEGAAMIRSKGEAGTGNVVEAVRHLRSIVGDIGKITQADSAELFDWAKQLQAPLPLIQEIADTGQLPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS 249
[Close]
BLAST of mRNA_M-pyrifera_M_contig106059.1311.1 vs. uniprot
Match: A0A355DE10_9ACTN (Pyridoxal 5'-phosphate synthase subunit PdxS n=8 Tax=root TaxID=1 RepID=A0A355DE10_9ACTN)

HSP 1 Score: 382 bits (982), Expect = 1.980e-132
Identity = 190/210 (90.48%), Postives = 205/210 (97.62%), Query Frame = 1 
Query:    1 KIAEDAGATSVMALERVPSDIRRDGGVSRMSDPEMIQGIQAAVSIPVMAKARIGHFAEAQILQSLGVDYIDESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNVVEAVRHLRSIMGDIRKIGQADNAELFDWAKQLQAPLPLVQEIAETGELPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS 630
            KIAEDAGA +VMALERVPSDIRRDGGV+RMSDPEM++GI+AAV+IPVMAKARIGHFAEAQILQSLGVDY+DESEVLTPADEAHHIDKWAF VPFVCGAT+LGEALRRISEGAC+IRSKGEAGTGN+VEAVRHLRSIMGDI K+ +AD AELFDWAK+LQ+PLPLVQEIAETGELPVPMFCAGGIATPADASLVMQLGAQ+VFVGSGIFKS
Sbjct:   36 KIAEDAGAVAVMALERVPSDIRRDGGVARMSDPEMVEGIKAAVTIPVMAKARIGHFAEAQILQSLGVDYVDESEVLTPADEAHHIDKWAFDVPFVCGATDLGEALRRISEGACLIRSKGEAGTGNIVEAVRHLRSIMGDIAKVTRADQAELFDWAKRLQSPLPLVQEIAETGELPVPMFCAGGIATPADASLVMQLGAQSVFVGSGIFKS 245
[Close]
BLAST of mRNA_M-pyrifera_M_contig106059.1311.1 vs. uniprot
Match: A0A2E8LFU0_9ACTN (Pyridoxal 5'-phosphate synthase subunit PdxS n=10 Tax=root TaxID=1 RepID=A0A2E8LFU0_9ACTN)

HSP 1 Score: 382 bits (981), Expect = 2.810e-132
Identity = 190/210 (90.48%), Postives = 206/210 (98.10%), Query Frame = 1 
Query:    1 KIAEDAGATSVMALERVPSDIRRDGGVSRMSDPEMIQGIQAAVSIPVMAKARIGHFAEAQILQSLGVDYIDESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNVVEAVRHLRSIMGDIRKIGQADNAELFDWAKQLQAPLPLVQEIAETGELPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS 630
            +IAEDAGA++VMALERVPSDIRRDGGV+RMSDPEMI+GI+ AV+IPVMAKARIGHFAEAQIL++LGVDY+DESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGN+VEAVRHLRSI+GD+RKI QAD AELFDWAK+LQAPLPLVQEIA+TG LPVPMFCAGGIATPADASLVMQLGA+AVFVGSGIFKS
Sbjct:   36 RIAEDAGASAVMALERVPSDIRRDGGVARMSDPEMIEGIKEAVTIPVMAKARIGHFAEAQILEALGVDYVDESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNIVEAVRHLRSIIGDMRKITQADAAELFDWAKRLQAPLPLVQEIADTGRLPVPMFCAGGIATPADASLVMQLGAEAVFVGSGIFKS 245
[Close]
BLAST of mRNA_M-pyrifera_M_contig106059.1311.1 vs. uniprot
Match: A0A6I3HB62_9ACTN (Pyridoxal 5'-phosphate synthase subunit PdxS n=6 Tax=root TaxID=1 RepID=A0A6I3HB62_9ACTN)

HSP 1 Score: 381 bits (979), Expect = 6.750e-132
Identity = 195/210 (92.86%), Postives = 200/210 (95.24%), Query Frame = 1 
Query:    1 KIAEDAGATSVMALERVPSDIRRDGGVSRMSDPEMIQGIQAAVSIPVMAKARIGHFAEAQILQSLGVDYIDESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNVVEAVRHLRSIMGDIRKIGQADNAELFDWAKQLQAPLPLVQEIAETGELPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS 630
            KIAEDAGA +VMALERVPSDIRRDGGV+RMSDPEMIQGIQ  VSIPVMAKARIGH AEAQILQ+L VDYIDESEVLTPADEAHHIDKWAF VPFVCGATNLGEALRRISEGACMIRSKGEAGTGNVVEAVRHLRSI+GDIRKI  AD AELFDWAK+LQAPLPLVQEIAETG LPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS
Sbjct:   41 KIAEDAGAVAVMALERVPSDIRRDGGVARMSDPEMIQGIQEVVSIPVMAKARIGHIAEAQILQALQVDYIDESEVLTPADEAHHIDKWAFDVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNVVEAVRHLRSILGDIRKITTADQAELFDWAKRLQAPLPLVQEIAETGTLPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS 250
[Close]
BLAST of mRNA_M-pyrifera_M_contig106059.1311.1 vs. uniprot
Match: A0A3M2GL56_ACTSX (Pyridoxal 5'-phosphate synthase subunit PdxS n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GL56_ACTSX)

HSP 1 Score: 380 bits (977), Expect = 1.180e-131
Identity = 189/210 (90.00%), Postives = 205/210 (97.62%), Query Frame = 1 
Query:    1 KIAEDAGATSVMALERVPSDIRRDGGVSRMSDPEMIQGIQAAVSIPVMAKARIGHFAEAQILQSLGVDYIDESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNVVEAVRHLRSIMGDIRKIGQADNAELFDWAKQLQAPLPLVQEIAETGELPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS 630
            +IAEDAGA +VMALERVP+DIRRDGGV+RMSDPEMIQGIQAAVSIPVMAK RIGHFAEAQILQ+LGVDY+DESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGN+VEAVRHLRSI+GDIRKI QAD+AELFDWAK+LQAPLPLV+E+ +TG LPVP+FCAGGIATPADA+LVMQLGA+AVFVGSGIFKS
Sbjct:   37 RIAEDAGAVAVMALERVPADIRRDGGVARMSDPEMIQGIQAAVSIPVMAKVRIGHFAEAQILQALGVDYVDESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNIVEAVRHLRSIVGDIRKITQADSAELFDWAKRLQAPLPLVREVHDTGWLPVPLFCAGGIATPADAALVMQLGAEAVFVGSGIFKS 246
[Close]
BLAST of mRNA_M-pyrifera_M_contig106059.1311.1 vs. uniprot
Match: A0A359F9N8_9ACTN (Pyridoxal 5'-phosphate synthase subunit PdxS n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A359F9N8_9ACTN)

HSP 1 Score: 379 bits (973), Expect = 5.150e-131
Identity = 193/210 (91.90%), Postives = 202/210 (96.19%), Query Frame = 1 
Query:    1 KIAEDAGATSVMALERVPSDIRRDGGVSRMSDPEMIQGIQAAVSIPVMAKARIGHFAEAQILQSLGVDYIDESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNVVEAVRHLRSIMGDIRKIGQADNAELFDWAKQLQAPLPLVQEIAETGELPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS 630
            KIAEDAGA +VMALERVPSDIRRDGGV+RMSDPEMI+GIQAAV+IPVMAKARIGHFAEAQILQSL VDYIDESEVLTPADE HHIDKWAF VPFVCGATNLGEALRRISEGACMIRSKGEAGTGN+VEAVRHLRSI+GDI KI QAD+AELF+WAKQLQAPL LVQEI +TGELPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS
Sbjct:   39 KIAEDAGACAVMALERVPSDIRRDGGVARMSDPEMIEGIQAAVTIPVMAKARIGHFAEAQILQSLEVDYIDESEVLTPADERHHIDKWAFEVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNIVEAVRHLRSILGDIAKITQADSAELFEWAKQLQAPLGLVQEIHDTGELPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS 248
[Close]
BLAST of mRNA_M-pyrifera_M_contig106059.1311.1 vs. uniprot
Match: UPI002016B040 (pyridoxal 5'-phosphate synthase lyase subunit PdxS n=2 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI002016B040)

HSP 1 Score: 379 bits (973), Expect = 5.720e-131
Identity = 187/210 (89.05%), Postives = 202/210 (96.19%), Query Frame = 1 
Query:    1 KIAEDAGATSVMALERVPSDIRRDGGVSRMSDPEMIQGIQAAVSIPVMAKARIGHFAEAQILQSLGVDYIDESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNVVEAVRHLRSIMGDIRKIGQADNAELFDWAKQLQAPLPLVQEIAETGELPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS 630
            +IAEDAGA +VMALERVPSDIRRDGGV+RMSDPEMI+GI+   ++PVMAKARIGHF EAQILQ+LGVDY+DESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGN+VEAVRHLRSI+GDIRKI QAD+AELF WAKQLQAP+PLVQEIAETG LPVPMFCAGGIATPADA+LVMQLGA+AVFVGSGIFKS
Sbjct:   42 RIAEDAGAVAVMALERVPSDIRRDGGVARMSDPEMIEGIKEVTTVPVMAKARIGHFVEAQILQALGVDYVDESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNIVEAVRHLRSILGDIRKISQADSAELFGWAKQLQAPIPLVQEIAETGALPVPMFCAGGIATPADAALVMQLGAEAVFVGSGIFKS 251
[Close]
BLAST of mRNA_M-pyrifera_M_contig106059.1311.1 vs. uniprot
Match: A0A2E6XSZ6_9ACTN (Pyridoxal 5'-phosphate synthase subunit PdxS n=5 Tax=Actinobacteria TaxID=201174 RepID=A0A2E6XSZ6_9ACTN)

HSP 1 Score: 379 bits (972), Expect = 6.590e-131
Identity = 189/210 (90.00%), Postives = 205/210 (97.62%), Query Frame = 1 
Query:    1 KIAEDAGATSVMALERVPSDIRRDGGVSRMSDPEMIQGIQAAVSIPVMAKARIGHFAEAQILQSLGVDYIDESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRISEGACMIRSKGEAGTGNVVEAVRHLRSIMGDIRKIGQADNAELFDWAKQLQAPLPLVQEIAETGELPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFKS 630
            +IAEDAGA +VMALERVPSDIRRDGGV+RMSDPEMI+GI+AAV+IPVMAKARIGHFAEAQILQ+LGVDY+DESEVLTPADEAHHIDKWAF VPFVCGATNLGEALRRISEGAC+IRSKGEAGTGN+VEAVRHLRSIMGDI +I +AD+AELFDWAK+LQ+PL LVQEIAETGELPVPMFCAGGIATPADASLVMQLGAQ+VFVGSGIFKS
Sbjct:   36 RIAEDAGAVAVMALERVPSDIRRDGGVARMSDPEMIEGIKAAVTIPVMAKARIGHFAEAQILQALGVDYVDESEVLTPADEAHHIDKWAFDVPFVCGATNLGEALRRISEGACLIRSKGEAGTGNIVEAVRHLRSIMGDIGRITKADSAELFDWAKRLQSPLSLVQEIAETGELPVPMFCAGGIATPADASLVMQLGAQSVFVGSGIFKS 245
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106059.1311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2GLQ5_9ACTN9.050e-13490.48Pyridoxal 5'-phosphate synthase subunit PdxS n=1 T... [more]
A0A6J5YAI4_9ZZZZ3.790e-13392.38Unannotated protein n=3 Tax=root TaxID=1 RepID=A0A... [more]
A0A6B1B1N3_9ACTN3.950e-13391.90Pyridoxal 5'-phosphate synthase subunit PdxS n=1 T... [more]
A0A355DE10_9ACTN1.980e-13290.48Pyridoxal 5'-phosphate synthase subunit PdxS n=8 T... [more]
A0A2E8LFU0_9ACTN2.810e-13290.48Pyridoxal 5'-phosphate synthase subunit PdxS n=10 ... [more]
A0A6I3HB62_9ACTN6.750e-13292.86Pyridoxal 5'-phosphate synthase subunit PdxS n=6 T... [more]
A0A3M2GL56_ACTSX1.180e-13190.00Pyridoxal 5'-phosphate synthase subunit PdxS n=1 T... [more]
A0A359F9N8_9ACTN5.150e-13191.90Pyridoxal 5'-phosphate synthase subunit PdxS n=1 T... [more]
UPI002016B0405.720e-13189.05pyridoxal 5'-phosphate synthase lyase subunit PdxS... [more]
A0A2E6XSZ6_9ACTN6.590e-13190.00Pyridoxal 5'-phosphate synthase subunit PdxS n=5 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig106059contigM-pyrifera_M_contig106059:1..630 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score362.1
Seed ortholog evalue1.8e-97
Seed eggNOG ortholog1313172.YM304_19820
Preferred namepdxS
KEGG rclassRC00010,RC01783,RC03043
KEGG koko:K06215
KEGG ReactionR07456
KEGG Pathwayko00750,map00750
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016020,GO:0016829,GO:0016840,GO:0016843,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0040007,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617
EggNOG free text desc.Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
EggNOG OGs2GK1T@201174,4CMSX@84992,COG0214@1,COG0214@2
EC4.3.3.6
COG Functional cat.H
Best tax levelAcidimicrobiia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size630
Cds size630
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815570.41796-CDS-M-pyrifera_M_contig106059:0..6301622815570.41796-CDS-M-pyrifera_M_contig106059:0..630Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig106059 1..630 -
1692277468.5546474-CDS-M-pyrifera_M_contig106059:0..6301692277468.5546474-CDS-M-pyrifera_M_contig106059:0..630Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig106059 1..630 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig106059.1311.1prot_M-pyrifera_M_contig106059.1311.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig106059 1..630 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig106059.1311.1

>prot_M-pyrifera_M_contig106059.1311.1 ID=prot_M-pyrifera_M_contig106059.1311.1|Name=mRNA_M-pyrifera_M_contig106059.1311.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp
KIAEDAGATSVMALERVPSDIRRDGGVSRMSDPEMIQGIQAAVSIPVMAK
ARIGHFAEAQILQSLGVDYIDESEVLTPADEAHHIDKWAFTVPFVCGATN
LGEALRRISEGACMIRSKGEAGTGNVVEAVRHLRSIMGDIRKIGQADNAE
LFDWAKQLQAPLPLVQEIAETGELPVPMFCAGGIATPADASLVMQLGAQA
VFVGSGIFKS
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mRNA from alignment at M-pyrifera_M_contig106059:1..630-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig106059.1311.1 ID=mRNA_M-pyrifera_M_contig106059.1311.1|Name=mRNA_M-pyrifera_M_contig106059.1311.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig106059:1..630- (Macrocystis pyrifera P11B4 male)
AAGATCGCCGAAGACGCCGGGGCCACCAGCGTCATGGCGCTCGAGCGAGT
GCCGTCCGACATCCGCCGTGATGGCGGCGTGTCACGCATGTCCGACCCGG
AGATGATCCAGGGCATCCAGGCTGCGGTCTCGATCCCGGTGATGGCGAAG
GCTCGCATCGGCCATTTCGCCGAGGCCCAGATCCTCCAGTCGCTCGGCGT
CGATTACATCGACGAGTCCGAAGTCCTCACCCCGGCCGACGAGGCCCACC
ACATCGACAAGTGGGCGTTCACCGTTCCCTTCGTGTGCGGGGCGACCAAC
CTCGGCGAGGCATTGCGCCGCATCAGCGAGGGCGCGTGCATGATCCGCTC
GAAGGGCGAGGCCGGCACCGGCAACGTCGTCGAGGCGGTTCGTCACCTGC
GTTCGATCATGGGCGACATCCGCAAGATCGGTCAGGCCGACAACGCCGAA
CTCTTCGACTGGGCCAAGCAGCTCCAGGCACCGCTCCCGCTCGTGCAGGA
GATCGCCGAGACCGGCGAGCTGCCCGTGCCGATGTTCTGCGCCGGTGGCA
TCGCCACCCCGGCCGATGCCTCCCTCGTGATGCAGCTCGGCGCCCAGGCC
GTGTTCGTGGGTTCGGGCATCTTCAAGAGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig106059:1..630-

>mRNA_M-pyrifera_M_contig106059.1311.1 ID=mRNA_M-pyrifera_M_contig106059.1311.1|Name=mRNA_M-pyrifera_M_contig106059.1311.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1260bp|location=Sequence derived from alignment at M-pyrifera_M_contig106059:1..630- (Macrocystis pyrifera P11B4 male)
AAGATCGCCGAAGACGCCGGGGCCACCAGCGTCATGGCGCTCGAGCGAGT
GCCGTCCGACATCCGCCGTGATGGCGGCGTGTCACGCATGTCCGACCCGG
AGATGATCCAGGGCATCCAGGCTGCGGTCTCGATCCCGGTGATGGCGAAG
GCTCGCATCGGCCATTTCGCCGAGGCCCAGATCCTCCAGTCGCTCGGCGT
CGATTACATCGACGAGTCCGAAGTCCTCACCCCGGCCGACGAGGCCCACC
ACATCGACAAGTGGGCGTTCACCGTTCCCTTCGTGTGCGGGGCGACCAAC
CTCGGCGAGGCATTGCGCCGCATCAGCGAGGGCGCGTGCATGATCCGCTC
GAAGGGCGAGGCCGGCACCGGCAACGTCGTCGAGGCGGTTCGTCACCTGC
GTTCGATCATGGGCGACATCCGCAAGATCGGTCAGGCCGACAACGCCGAA
CTCTTCGACTGGGCCAAGCAGCTCCAGGCACCGCTCCCGCTCGTGCAGGA
GATCGCCGAGACCGGCGAGCTGCCCGTGCCGATGTTCTGCGCCGGTGGCA
TCGCCACCCCGGCCGATGCCTCCCTCGTGATGCAGCTCGGCGCCCAGGCC
GTGTTCGTGGGTTCGGGCATCTTCAAGAGCAAGATCGCCGAAGACGCCGG
GGCCACCAGCGTCATGGCGCTCGAGCGAGTGCCGTCCGACATCCGCCGTG
ATGGCGGCGTGTCACGCATGTCCGACCCGGAGATGATCCAGGGCATCCAG
GCTGCGGTCTCGATCCCGGTGATGGCGAAGGCTCGCATCGGCCATTTCGC
CGAGGCCCAGATCCTCCAGTCGCTCGGCGTCGATTACATCGACGAGTCCG
AAGTCCTCACCCCGGCCGACGAGGCCCACCACATCGACAAGTGGGCGTTC
ACCGTTCCCTTCGTGTGCGGGGCGACCAACCTCGGCGAGGCATTGCGCCG
CATCAGCGAGGGCGCGTGCATGATCCGCTCGAAGGGCGAGGCCGGCACCG
GCAACGTCGTCGAGGCGGTTCGTCACCTGCGTTCGATCATGGGCGACATC
CGCAAGATCGGTCAGGCCGACAACGCCGAACTCTTCGACTGGGCCAAGCA
GCTCCAGGCACCGCTCCCGCTCGTGCAGGAGATCGCCGAGACCGGCGAGC
TGCCCGTGCCGATGTTCTGCGCCGGTGGCATCGCCACCCCGGCCGATGCC
TCCCTCGTGATGCAGCTCGGCGCCCAGGCCGTGTTCGTGGGTTCGGGCAT
CTTCAAGAGC
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