mRNA_M-pyrifera_M_contig106041.1308.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106041.1308.1 vs. uniprot
Match: UPI001F1ACD25 (DUF4272 domain-containing protein n=1 Tax=Tenacibaculum ovolyticum TaxID=104270 RepID=UPI001F1ACD25) HSP 1 Score: 98.6 bits (244), Expect = 8.500e-24 Identity = 42/63 (66.67%), Postives = 52/63 (82.54%), Query Frame = 1 Query: 1 EVIRLEDRFYCAHNAVRNAQVGRETVPNGLDPIVNGGVLHERRHVLTWAVSSGGRWDDTDLRT 189 ++I+ ED FYC HNAVR+AQ+GRETVPNG DP+ NGGV+HERRH LTW +S G W++TDL T Sbjct: 191 KLIQKEDLFYCIHNAVRSAQMGRETVPNGFDPMGNGGVIHERRHSLTWMLSKGISWEETDLST 253
BLAST of mRNA_M-pyrifera_M_contig106041.1308.1 vs. uniprot
Match: A0A2D4YAV9_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D4YAV9_9FLAO) HSP 1 Score: 98.2 bits (243), Expect = 1.220e-23 Identity = 42/63 (66.67%), Postives = 52/63 (82.54%), Query Frame = 1 Query: 1 EVIRLEDRFYCAHNAVRNAQVGRETVPNGLDPIVNGGVLHERRHVLTWAVSSGGRWDDTDLRT 189 E+I+ ED FYC HNAVR+AQ+GRE+VP+G DPI NGGV+HERRH LTW +S G W++TDL T Sbjct: 192 ELIQKEDLFYCLHNAVRSAQLGRESVPDGFDPIGNGGVIHERRHSLTWMLSKGINWEETDLST 254
BLAST of mRNA_M-pyrifera_M_contig106041.1308.1 vs. uniprot
Match: A0A0T0M6D6_9FLAO (Uncharacterized protein n=2 Tax=Chryseobacterium TaxID=59732 RepID=A0A0T0M6D6_9FLAO) HSP 1 Score: 97.8 bits (242), Expect = 1.690e-23 Identity = 41/58 (70.69%), Postives = 47/58 (81.03%), Query Frame = 1 Query: 16 EDRFYCAHNAVRNAQVGRETVPNGLDPIVNGGVLHERRHVLTWAVSSGGRWDDTDLRT 189 ED FYC HNAVR+AQ+GR+TVP DPI NGGV+HERRH LTW +S+G WDDTDL T Sbjct: 196 EDMFYCIHNAVRSAQMGRKTVPENFDPIANGGVIHERRHALTWMLSNGVSWDDTDLST 253
BLAST of mRNA_M-pyrifera_M_contig106041.1308.1 vs. uniprot
Match: UPI0018CAA723 (DUF4272 domain-containing protein n=1 Tax=Aureivirga sp. CE67 TaxID=1788983 RepID=UPI0018CAA723) HSP 1 Score: 99.8 bits (247), Expect = 1.810e-23 Identity = 41/63 (65.08%), Postives = 52/63 (82.54%), Query Frame = 1 Query: 1 EVIRLEDRFYCAHNAVRNAQVGRETVPNGLDPIVNGGVLHERRHVLTWAVSSGGRWDDTDLRT 189 +++++ D FYC HNAVR+AQ+GR+TVPNG DP+ NGGV+HERRH LTW VS G W+DTDL T Sbjct: 305 DLMQMTDLFYCLHNAVRSAQMGRQTVPNGFDPMGNGGVIHERRHSLTWMVSKGTNWEDTDLST 367
BLAST of mRNA_M-pyrifera_M_contig106041.1308.1 vs. uniprot
Match: UPI001E4E7097 (DUF4272 domain-containing protein n=1 Tax=Massilia antarctica TaxID=2765360 RepID=UPI001E4E7097) HSP 1 Score: 95.1 bits (235), Expect = 2.960e-23 Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 1 Query: 1 EVIRLEDRFYCAHNAVRNAQVGRETVPNGLDPIVNGGVLHERRHVLTWAVSSGGRWDDTDLRT 189 E I +E +FYCAHNA+R+AQ+G TVP G DPIV+GG +HERRH LTWA++ G WDDTDL T Sbjct: 108 EAIYMEYKFYCAHNALRSAQLGGATVPAGFDPIVHGGAVHERRHSLTWALAPGHGWDDTDLNT 170
BLAST of mRNA_M-pyrifera_M_contig106041.1308.1 vs. uniprot
Match: A0A517SCT2_9PLAN (Uncharacterized protein n=1 Tax=Caulifigura coniformis TaxID=2527983 RepID=A0A517SCT2_9PLAN) HSP 1 Score: 95.9 bits (237), Expect = 5.290e-23 Identity = 41/62 (66.13%), Postives = 46/62 (74.19%), Query Frame = 1 Query: 4 VIRLEDRFYCAHNAVRNAQVGRETVPNGLDPIVNGGVLHERRHVLTWAVSSGGRWDDTDLRT 189 VI L D FYCAHNAVR+AQVGR TVP G P+ +GG +HERRH L W +S GG WDD DL T Sbjct: 164 VIELTDYFYCAHNAVRSAQVGRRTVPKGFHPVADGGTVHERRHGLAWCLSPGGAWDDVDLST 225
BLAST of mRNA_M-pyrifera_M_contig106041.1308.1 vs. uniprot
Match: A0A5N5ZHD2_9FLAO (DUF4272 domain-containing protein n=1 Tax=Kordia sp. TARA_039_SRF TaxID=2530203 RepID=A0A5N5ZHD2_9FLAO) HSP 1 Score: 96.3 bits (238), Expect = 6.610e-23 Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 1 Query: 4 VIRLEDRFYCAHNAVRNAQVGRETVPNGLDPIVNGGVLHERRHVLTWAVSSGGRWDDTDLRT 189 V+ ED FYC HNAVR+AQ+GR+TVP+ DP+VNGGV+HERRH LTW +S G WD TDL T Sbjct: 192 VMEKEDLFYCLHNAVRSAQLGRDTVPSSFDPMVNGGVIHERRHSLTWMLSKGVSWDQTDLST 253
BLAST of mRNA_M-pyrifera_M_contig106041.1308.1 vs. uniprot
Match: UPI001300BA57 (DUF4272 domain-containing protein n=1 Tax=Winogradskyella tangerina TaxID=2023240 RepID=UPI001300BA57) HSP 1 Score: 96.3 bits (238), Expect = 7.690e-23 Identity = 41/58 (70.69%), Postives = 47/58 (81.03%), Query Frame = 1 Query: 16 EDRFYCAHNAVRNAQVGRETVPNGLDPIVNGGVLHERRHVLTWAVSSGGRWDDTDLRT 189 ED FYC HNAVR+AQ GRETVP G DP+ NGGV+HERRH LTW +S G +W+DTDL T Sbjct: 204 EDLFYCLHNAVRSAQFGRETVPAGFDPMGNGGVIHERRHSLTWMLSDGTKWEDTDLST 261
BLAST of mRNA_M-pyrifera_M_contig106041.1308.1 vs. uniprot
Match: A0A7C1QQN9_9FLAO (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7C1QQN9_9FLAO) HSP 1 Score: 90.5 bits (223), Expect = 1.050e-22 Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = 1 Query: 16 EDRFYCAHNAVRNAQVGRETVPNGLDPIVNGGVLHERRHVLTWAVSSGGRWDDTDLRT 189 ED YC HNAVR+AQ+G ETVPNG DP+ NGGV+HERRH LT+ VS+G W++TDL T Sbjct: 4 EDLLYCLHNAVRSAQMGSETVPNGFDPMGNGGVIHERRHSLTFMVSNGDSWENTDLST 61
BLAST of mRNA_M-pyrifera_M_contig106041.1308.1 vs. uniprot
Match: UPI0016525673 (DUF4272 domain-containing protein n=1 Tax=Massilia genomosp. 1 TaxID=2609280 RepID=UPI0016525673) HSP 1 Score: 98.2 bits (243), Expect = 1.100e-22 Identity = 42/62 (67.74%), Postives = 49/62 (79.03%), Query Frame = 1 Query: 4 VIRLEDRFYCAHNAVRNAQVGRETVPNGLDPIVNGGVLHERRHVLTWAVSSGGRWDDTDLRT 189 VI +E RFYCAHNAVR+AQ+G TVP G DPI +GG +HERRH LTWA++ G WDDTDL T Sbjct: 357 VIEMEYRFYCAHNAVRSAQMGATTVPAGFDPIAHGGAVHERRHALTWALAPGDEWDDTDLST 418 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106041.1308.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106041.1308.1 >prot_M-pyrifera_M_contig106041.1308.1 ID=prot_M-pyrifera_M_contig106041.1308.1|Name=mRNA_M-pyrifera_M_contig106041.1308.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=64bp EVIRLEDRFYCAHNAVRNAQVGRETVPNGLDPIVNGGVLHERRHVLTWAVback to top mRNA from alignment at M-pyrifera_M_contig106041:3..194+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106041.1308.1 ID=mRNA_M-pyrifera_M_contig106041.1308.1|Name=mRNA_M-pyrifera_M_contig106041.1308.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=192bp|location=Sequence derived from alignment at M-pyrifera_M_contig106041:3..194+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106041:3..194+ >mRNA_M-pyrifera_M_contig106041.1308.1 ID=mRNA_M-pyrifera_M_contig106041.1308.1|Name=mRNA_M-pyrifera_M_contig106041.1308.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig106041:3..194+ (Macrocystis pyrifera P11B4 male)back to top |