mRNA_M-pyrifera_M_contig106031.1301.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106031.1301.1 vs. uniprot
Match: A0A2R5GNV9_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNV9_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.780e-16 Identity = 57/134 (42.54%), Postives = 74/134 (55.22%), Query Frame = 1
Query: 16 MALPSPD-TPPADESLMADRQQLEFLLSPEAKEYWRKLCPALHVGDSD-VQQYLSLGKAFFSDEAVGDYCSRLEA-------DGHFHMPALSLGL---EHLAP--ALARGVVSLVQHGWPASFIMLYDEVWAII 375
M LPSP T E + AD Q +E L E YWRK+CP LHVG+ + VQ+ K E V ++ ++ E +G FHM LGL ++L ALA GVV L+QHGWPASFI +YDE W ++
Sbjct: 4 MPLPSPKATGEVSEDMRADEQLMETL---EDAAYWRKVCPHLHVGEHERVQEAAQAAK-----ERVANWQTQAETKRGEFAENGFFHMTPQDLGLGEDDYLERIHALALGVVRLMQHGWPASFIFIYDEAWILV 129
BLAST of mRNA_M-pyrifera_M_contig106031.1301.1 vs. uniprot
Match: A0A8J4DAU3_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4DAU3_9CHLO) HSP 1 Score: 78.6 bits (192), Expect = 3.270e-14 Identity = 46/143 (32.17%), Postives = 74/143 (51.75%), Query Frame = 1
Query: 4 FPRRMALPSPDTPPADESLMADRQQLEFLLSPEAKEYWRKLCPALHVGDSDVQQYLSLGKAFFSDEAVGDYCSRLEADGHFHMPALSLGLEHLAPALARGVVSLVQHGWPASFIMLYDEVWAIIDRVKDIMKTVSGNEVSLAV 432
FPR+ LP P +P +E A + + L EYW +CP L VG L + K S + D+ ++ +G F + + LA +V+L+QHGWPA+F++++DEVWA+I+R +M +GN ++ V
Sbjct: 8 FPRKANLPDPYSPCPNEKCHASTRNIRNL---SELEYWAAICPHLSVGGR-----LEINKKKRSKQNDEDFRRQMHDEGVFQVYPSEMQWPVDIHRLALNMVTLMQHGWPATFLLMFDEVWALIERASGLMVATTGNTCNMDV 142
BLAST of mRNA_M-pyrifera_M_contig106031.1301.1 vs. uniprot
Match: A0A150H3R6_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H3R6_GONPE) HSP 1 Score: 74.3 bits (181), Expect = 1.000e-12 Identity = 47/144 (32.64%), Postives = 71/144 (49.31%), Query Frame = 1
Query: 4 FPRRMALPSPDTPPADESLMADRQQLEFLLSPEAKEYWRKLCPALHVGDSDVQQYLSLGKAFFSDEAVGDYCSRLEADGHFHMPALSLGLEHLAPALARGVVSLVQHGWPASFIMLYDEVWAIIDRVKDIMKTVSG-NEVSLAV 432
F +R+ LP P P DESL A + L L YW + P L G S GK V + ++ +G F L A+A+ +V L++HGWPA+F+++YDE+W +I R +++K SG NE ++ V
Sbjct: 28 FRKRIELPDPSVPWEDESLHASTRNLGNL---SEAGYWAAVLPDLTAGTSKASAR-EAGKPCLPKGLVESFKEQMLTEGVFQASPQELQWGVDMDAMAQSMVRLMRHGWPATFLIMYDEIWTLIQRASELVKRTSGGNECNMDV 167
BLAST of mRNA_M-pyrifera_M_contig106031.1301.1 vs. uniprot
Match: A0A813KAI5_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KAI5_POLGL) HSP 1 Score: 73.6 bits (179), Expect = 1.520e-12 Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 1
Query: 109 EYWRKLCPALHVGDSDVQQYLSLGKAFFSDEAVGDYC-SRLEADGHFHMPAL----------SLGLEHLAPALARGVVSLVQHGWPASFIMLYDEVWAIIDRVKDIMKTVSGN 414
EYW LCPALHVGD ++ + L+ D + D C R+ DG+F++ A SL ALA GV L + GWPASF+++YDE W + ++K+ M +GN
Sbjct: 45 EYWAALCPALHVGDPEMAR-LAADSVLDVDPDLVDECRERMLLDGYFNIDAAFTPEEPESGRSLDWAVDVAALADGVKRLTEAGWPASFLLMYDEPWIMAHQLKNFMLMTTGN 156
BLAST of mRNA_M-pyrifera_M_contig106031.1301.1 vs. uniprot
Match: A0A812WBR6_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812WBR6_9DINO) HSP 1 Score: 72.0 bits (175), Expect = 2.360e-12 Identity = 48/129 (37.21%), Postives = 64/129 (49.61%), Query Frame = 1
Query: 58 LMADRQQLEFLLSPEAKEYWRKLCPALHVGDSDVQQYLSLGKAFFSDEAVGDYCSRLEA----DGHFHMPALSLGLEHLAPALARGVVSLVQHGWPASFIMLYDEVWAIIDRVKDIMKTVSGNEVSLAV 432
L A Q E + S YWR+LCP LHV D Q + L + S AV D C + A +G + L LA+GV+ L QHGWPA+FI LYDE WA+ +M+ +GN + + V
Sbjct: 5 LHASAQTQESIFSAS---YWRQLCPELHVEDKSFQAEV-LARDGRSVAAVSD-CREVRARILEEGFAALSPAQLSWTAPVGRLAQGVLQLEQHGWPATFIALYDEAWAMARDAGAVMREATGNSLCMDV 128
BLAST of mRNA_M-pyrifera_M_contig106031.1301.1 vs. uniprot
Match: A0A813GZE3_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GZE3_POLGL) HSP 1 Score: 72.8 bits (177), Expect = 3.310e-12 Identity = 42/108 (38.89%), Postives = 55/108 (50.93%), Query Frame = 1
Query: 112 YWRKLCPALHVGDSDVQQY---LSLGKAFFSDEAVGDYCSRLEADGHFHMPALSLGLEHLAPALARGVVSLVQHGWPASFIMLYDEVWAIIDRVKDIMKTVSGNEVSL 426
YWR+LCP LHV D Q L S + + RL +G + L ALARGVV+L +HGW A+FI LYDE WA+ IM+ +GN +S+
Sbjct: 15 YWRQLCPELHVEDKAFQARVVALQAEAGASSPQDCAEVRRRLVEEGFAALEPAQLRWSVDVHALARGVVTLQEHGWAATFICLYDEAWAMAGDASRIMQLATGNSLSM 122
BLAST of mRNA_M-pyrifera_M_contig106031.1301.1 vs. uniprot
Match: A0A812M9I3_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812M9I3_9DINO) HSP 1 Score: 72.0 bits (175), Expect = 6.020e-12 Identity = 48/129 (37.21%), Postives = 64/129 (49.61%), Query Frame = 1
Query: 58 LMADRQQLEFLLSPEAKEYWRKLCPALHVGDSDVQQYLSLGKAFFSDEAVGDYCSRLEA----DGHFHMPALSLGLEHLAPALARGVVSLVQHGWPASFIMLYDEVWAIIDRVKDIMKTVSGNEVSLAV 432
L A Q E + S YWR+LCP LHV D Q + L + S AV D C + A +G + L LA+GV+ L QHGWPA+FI LYDE WA+ +M+ +GN + + V
Sbjct: 5 LHASAQTQESIFSAS---YWRQLCPELHVEDKSFQAEV-LARDGRSVAAVSD-CREVRARILEEGFAALSPAQLSWTAPVGRLAQGVLQLEQHGWPATFIALYDEAWAMARDAGAVMREATGNSLCMDV 128
BLAST of mRNA_M-pyrifera_M_contig106031.1301.1 vs. uniprot
Match: A0A812KFV5_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812KFV5_9DINO) HSP 1 Score: 71.6 bits (174), Expect = 8.050e-12 Identity = 41/125 (32.80%), Postives = 65/125 (52.00%), Query Frame = 1
Query: 61 MADRQQLEFLLSPEAKEYWRKLCPALHVGDSDVQ-QYLSLGKAFFSDEAVGDYCSRLEADGHFHMPALSLGLEHLAPALARGVVSLVQHGWPASFIMLYDEVWAIIDRVKDIMKTVSGNEVSLAV 432
MAD + + S + YWR++CP LHV D Q + L+ ++ + + SR+ +G + L LA+GV+ L +HGWPA+FI LYDE WA+ +M+ +GN + + V
Sbjct: 1 MADAAEAQREESIFSTSYWRQVCPELHVEDKAYQAEVLARDRSVAAVADCREVRSRILEEGFAALSPAQLSWTAPVGRLAQGVLQLEKHGWPATFIALYDEAWAMARDAGAVMREATGNSLCMDV 125
BLAST of mRNA_M-pyrifera_M_contig106031.1301.1 vs. uniprot
Match: A0A835Y8E4_9CHLO (SET domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y8E4_9CHLO) HSP 1 Score: 71.2 bits (173), Expect = 1.290e-11 Identity = 36/102 (35.29%), Postives = 60/102 (58.82%), Query Frame = 1
Query: 112 YWRKLCPALHVGDSDVQQYLSLGKAFFSDEAVGDYCSRLEADG--HFHMPALSLGLEHLAPALARGVVSLVQHGWPASFIMLYDEVWAIIDRVKDIMKTVSG 411
YW+K+CP LH+G + L K + + D +++++G F ++ G++ LA +V L+QHGWP+ F++L+DEVWA+I R +M +VSG
Sbjct: 682 YWQKVCPELHIGGKLAVKPLPKPK-----DVITDARKQIDSEGVVQFAPSDMAWGVD--VDGLAHSLVRLMQHGWPSPFLVLFDEVWALIHRASSLMSSVSG 776
BLAST of mRNA_M-pyrifera_M_contig106031.1301.1 vs. uniprot
Match: A8IBM5_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IBM5_CHLRE) HSP 1 Score: 70.5 bits (171), Expect = 2.340e-11 Identity = 45/143 (31.47%), Postives = 65/143 (45.45%), Query Frame = 1
Query: 4 FPRRMALPSPDTPPADESLMADRQQLEFLLSPEAKEYWRKLCPALHVGDSDVQQYLSLGKAFFSDEAVGDYCSRLEADGHFHMPALSLGLEHLAPALARGVVSLVQHGWPASFIMLYDEVWAIIDRVKDIMKTVSGNEVSLAV 432
FPRR LP P TP D+ L+ + LE L P YW +LCP L V + K + E V D ++ +G +VQ GWPASF+++YDEVWA++ + +M +GN ++ V
Sbjct: 8 FPRRANLPDPKTPCPDQELLMATRNLENLADPS---YWARLCPELSVSG---KLGTKAAKKKWGKEVVKDAREQVLTEG------------------------VVQAGWPASFLIMYDEVWALVQQASSLMAGATGNACNMDV 120 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106031.1301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106031.1301.1 >prot_M-pyrifera_M_contig106031.1301.1 ID=prot_M-pyrifera_M_contig106031.1301.1|Name=mRNA_M-pyrifera_M_contig106031.1301.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp MFPRRMALPSPDTPPADESLMADRQQLEFLLSPEAKEYWRKLCPALHVGDback to top mRNA from alignment at M-pyrifera_M_contig106031:70..501- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106031.1301.1 ID=mRNA_M-pyrifera_M_contig106031.1301.1|Name=mRNA_M-pyrifera_M_contig106031.1301.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=432bp|location=Sequence derived from alignment at M-pyrifera_M_contig106031:70..501- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106031:70..501- >mRNA_M-pyrifera_M_contig106031.1301.1 ID=mRNA_M-pyrifera_M_contig106031.1301.1|Name=mRNA_M-pyrifera_M_contig106031.1301.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig106031:70..501- (Macrocystis pyrifera P11B4 male)back to top |