mRNA_M-pyrifera_M_contig106028.1300.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106028.1300.1 vs. uniprot
Match: A0A150GZP3_GONPE (SET domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GZP3_GONPE) HSP 1 Score: 83.6 bits (205), Expect = 5.820e-16 Identity = 48/102 (47.06%), Postives = 63/102 (61.76%), Query Frame = 1
Query: 115 QPQLEALCQEDGTRLEEEFALLCSGNEASSMLFIGNCMNHSCVPNVFAACGSPDARIQFIAMSPIAAGVELSRSYIDESLPQTARAATLARRYGFHCQCPTC 420
QP L+AL + E+A +G EA++ + + +C+NHSC PN AAC PDA + +A PIAAG E++ SYID SLP AR A LA YGF C+C C
Sbjct: 405 QPLLDAL--------DAEYA---TGAEATAFMALQSCINHSCDPNCTAACEGPDATVSVVAQRPIAAGTEITLSYIDVSLPYKARQAELAD-YGFVCRCERC 494
BLAST of mRNA_M-pyrifera_M_contig106028.1300.1 vs. uniprot
Match: A0A2K3E7I3_CHLRE (SET domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3E7I3_CHLRE) HSP 1 Score: 79.7 bits (195), Expect = 1.340e-14 Identity = 53/144 (36.81%), Postives = 78/144 (54.17%), Query Frame = 1
Query: 1 LVTVDILRRLCGSIQQNAQRLAPVSELQ-YCIVTTQPELQPQLEALCQEDGT---RLEEEFALLCSGNEASSMLFIGNCMNHSCVPNVFAACGSPDARIQFIAMSPIAAGVELSRSYIDESLPQTARAATLARRYGFHCQCPTC 420
L+T+++ + G + N L+ S ++ + + + E P A+C+ G L+ E+A C EA++ L + +C+NHSC PN AAC S D +A IAAG E++ SYID SLP R A L R YGF C+C C
Sbjct: 415 LLTLEVYGSVVGLFELNNLGLSVCSPVEDFFLAVDEQEEGPDKAAVCKLTGPLLDALDAEYATPC---EATAFLALQSCINHSCDPNCTAACDSGDRTATLLAQRDIAAGEEITLSYIDVSLPYKRRQAEL-RDYGFVCKCERC 554
BLAST of mRNA_M-pyrifera_M_contig106028.1300.1 vs. uniprot
Match: A0A835WJB1_9CHLO (SET domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WJB1_9CHLO) HSP 1 Score: 78.2 bits (191), Expect = 4.690e-14 Identity = 52/144 (36.11%), Postives = 78/144 (54.17%), Query Frame = 1
Query: 1 LVTVDILRRLCGSIQQNAQRLAPVSELQ-YCIVTTQPELQPQLEALCQEDGT---RLEEEFALLCSGNEASSMLFIGNCMNHSCVPNVFAACGSPDARIQFIAMSPIAAGVELSRSYIDESLPQTARAATLARRYGFHCQCPTC 420
L+T+++ + G + N L+ S ++ + + + E P A+C+ G L+ E+A C EA++ L + +C+NHSC PN AAC S D +A IAAG E++ SYID +LP R A L R YGF C+C C
Sbjct: 466 LLTLEVYGSVVGLFELNNLGLSVCSPVEDFFLAVDEEEEGPDKAAVCKLTGPLLDALDAEYATPC---EATAFLALQSCINHSCDPNATAACDSGDRTATVLAQRDIAAGDEITLSYIDVNLPYKRRQAEL-RDYGFVCKCERC 605
BLAST of mRNA_M-pyrifera_M_contig106028.1300.1 vs. uniprot
Match: D8U5L8_VOLCA (SET and zf-MYND domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U5L8_VOLCA) HSP 1 Score: 70.5 bits (171), Expect = 2.160e-11 Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 115 QPQLEALCQEDGTRLEEEFALLCSGNEASSMLFIGNCMNHSCVPNVFAACGSPDARIQFIAMSPIAAGVELSRSYIDESLPQTARAATLARRYGFHCQCPTCL 423
QP L+AL + E+A C E+++ L + +C+NHSC PN A C + D + +A IAAG E++ SYID +LP R A L R YGF C+C C+
Sbjct: 373 QPLLDAL--------DSEYASPC---ESTAFLALQSCINHSCDPNCTAVCDTGDRTVTVLAQRDIAAGEEITLSYIDVTLPYKERQAAL-RDYGFVCRCTRCV 463
BLAST of mRNA_M-pyrifera_M_contig106028.1300.1 vs. uniprot
Match: A0A836BB19_9CHLO (SET domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BB19_9CHLO) HSP 1 Score: 60.8 bits (146), Expect = 5.480e-8 Identity = 32/74 (43.24%), Postives = 41/74 (55.41%), Query Frame = 1
Query: 199 SSMLFIGNCMNHSCVPNVFAACGSPDARIQFIAMSPIAAGVELSRSYIDESLPQTARAATLARRYGFHCQCPTC 420
S+ + + +NHSC P++ A D F+A IAAG ELS SY+D LP AR L YGF C+CP C
Sbjct: 451 SATYLLASLLNHSCEPSLELAFPGMDGTAAFVAARDIAAGEELSVSYMDVGLPYEARQRHLEWSYGFVCRCPRC 524
BLAST of mRNA_M-pyrifera_M_contig106028.1300.1 vs. uniprot
Match: A0A0C9X1D8_9AGAR (SET domain-containing protein n=2 Tax=Laccaria TaxID=29882 RepID=A0A0C9X1D8_9AGAR) HSP 1 Score: 60.1 bits (144), Expect = 8.400e-8 Identity = 31/79 (39.24%), Postives = 39/79 (49.37%), Query Frame = 1
Query: 184 SGNEASSMLFIGNCMNHSCVPNVFAACGSPDARIQFIAMSPIAAGVELSRSYIDESLPQTARAATLARRYGFHCQCPTC 420
S + I N NHSC PN P A+ PI AG E++++YID SLP++ R A L YGF C C C
Sbjct: 151 SAKNYGAAFLILNRANHSCGPNAAIKWNLPTLTASMYALRPILAGEEITKTYIDPSLPRSERIAHLQENYGFTCDCQWC 229
BLAST of mRNA_M-pyrifera_M_contig106028.1300.1 vs. uniprot
Match: A0A5D6YCX3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCX3_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 8.650e-8 Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 1
Query: 229 NHSCVPNVFAACGSPDARIQFIAMSPIAAGVELSRSYIDESLPQTARAATLARRYGFHCQCPTC 420
NHSC PN + + R++F AM IAAG EL+ SY+D +LP+ R L ++Y F C+C C
Sbjct: 177 NHSCEPNCAVTFSAKEQRVEFRAMRAIAAGEELTHSYVDIALPRRDRQQRLEQQYHFQCKCVRC 240
BLAST of mRNA_M-pyrifera_M_contig106028.1300.1 vs. uniprot
Match: U6N5A1_9EIME (SET domain-containing protein n=2 Tax=Eimeria TaxID=5800 RepID=U6N5A1_9EIME) HSP 1 Score: 58.2 bits (139), Expect = 4.300e-7 Identity = 29/75 (38.67%), Postives = 38/75 (50.67%), Query Frame = 1
Query: 196 ASSMLFIGNCMNHSCVPNVFAACGSPDARIQFIAMSPIAAGVELSRSYIDESLPQTARAATLARRYGFHCQCPTC 420
A+ + + +C NHSC PN P+AAG EL+ SYI +LP+ R A L+ YGF C CP C
Sbjct: 420 AAGLFVLQSCCNHSCSPNCXXXXXXXXXXXXXXXAKPVAAGTELTLSYIPLALPRQQRQALLSSSYGFLCCCPRC 494
BLAST of mRNA_M-pyrifera_M_contig106028.1300.1 vs. uniprot
Match: A0A0M9G4E4_9TRYP (SET domain-containing protein n=1 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0M9G4E4_9TRYP) HSP 1 Score: 57.8 bits (138), Expect = 5.650e-7 Identity = 49/147 (33.33%), Postives = 64/147 (43.54%), Query Frame = 1
Query: 28 LCGSIQQNAQRLAPVSELQYCIVTTQPELQPQLEALCQEDGTRLEEEF-------------ALLCSGNEASSMLFIGNCMNHSCVPNV---FAACGSPDARIQFIAMSPIAAGVELSRSYIDESLPQTARAATLARRYGFHCQCPTC 420
L G++ N Q +P S +L L A C DG L +EF A L + + +G NHSC PN+ +AA D + +A+ IAAG EL+ SYID SLP R L Y F C+CP C
Sbjct: 298 LLGAVLLNGQDRSPPSPY---------DLHRDLVA-CLPDGEALMKEFEHNVLQTSSLTDAADLSHSSRGQGIYGVGCLFNHSCDPNLNVQYAAVN--DETLSVVALRDIAAGEELTISYIDTSLPYAVRQQQLLDHYLFECKCPRC 432
BLAST of mRNA_M-pyrifera_M_contig106028.1300.1 vs. uniprot
Match: A0A7J7B6Q5_9COLE (Histone-lysine N-trimethyltransferase SMYD5 n=1 Tax=Abscondita terminalis TaxID=2069292 RepID=A0A7J7B6Q5_9COLE) HSP 1 Score: 55.8 bits (133), Expect = 2.530e-6 Identity = 49/152 (32.24%), Postives = 71/152 (46.71%), Query Frame = 1
Query: 1 LVTVDILRRLCGSIQQNAQRLAPVSELQYCIVTTQPEL------QPQLEALCQ---EDGTRLEEEFALLCSGNEASSMLFIGNCMNHSCVPNVFAACGSPDARIQFIAMSPIAAGVELSRSYIDES---LPQTARAATLARRYGFHCQCPTC 420
L+TV+ + L I NAQ + + Q+ VT EL + QL+ ED R F NE ++ + + NHSC+PN ++R+ +A+ IAAG E+S SY+DE + +R TL Y F CQCP C
Sbjct: 216 LLTVEGFQSLLALIGTNAQGVGTSAVSQW--VTRSSELPLPDAEKQQLDNFIDKLYEDMDRNSGNFL----NNEGVALYSLQSSANHSCIPNAEPTYLHNNSRLSLVALKDIAAGEEISISYLDECNLFRSRHSRHKTLMENYLFICQCPKC 361 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106028.1300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106028.1300.1 >prot_M-pyrifera_M_contig106028.1300.1 ID=prot_M-pyrifera_M_contig106028.1300.1|Name=mRNA_M-pyrifera_M_contig106028.1300.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp LVTVDILRRLCGSIQQNAQRLAPVSELQYCIVTTQPELQPQLEALCQEDGback to top mRNA from alignment at M-pyrifera_M_contig106028:16..450+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106028.1300.1 ID=mRNA_M-pyrifera_M_contig106028.1300.1|Name=mRNA_M-pyrifera_M_contig106028.1300.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=435bp|location=Sequence derived from alignment at M-pyrifera_M_contig106028:16..450+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106028:16..450+ >mRNA_M-pyrifera_M_contig106028.1300.1 ID=mRNA_M-pyrifera_M_contig106028.1300.1|Name=mRNA_M-pyrifera_M_contig106028.1300.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=870bp|location=Sequence derived from alignment at M-pyrifera_M_contig106028:16..450+ (Macrocystis pyrifera P11B4 male)back to top |