mRNA_M-pyrifera_M_contig106023.1298.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig106023.1298.1
Unique NamemRNA_M-pyrifera_M_contig106023.1298.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig106023.1298.1 vs. uniprot
Match: A0A3D3BGF5_RHISP (Ribosomal RNA large subunit methyltransferase J n=1 Tax=Rhizobium sp. TaxID=391 RepID=A0A3D3BGF5_RHISP)

HSP 1 Score: 290 bits (741), Expect = 5.710e-96
Identity = 135/210 (64.29%), Postives = 162/210 (77.14%), Query Frame = 1 
Query:    1 GEWKDGIGRLLSGNLPEPAQILLEPYLSVVRALNSGKTLNQYPGSPKLARALLRKQDRLSAIELHPHDCGKLRALFEGDFQTRVIALDGWLALGGHVPPKEKRGLVLVDPPFEKEGEFDRIVDGLARAHRRWASGTYCLWYPIKAGNHTPSFHAKMRALGISRILCVELNVLNQAETTGLAGSGLVIINPPFTLYCELEVLLPALHGCLS 630
            GEW+DGIGRL+  +LP    +LLEPYL  VR LN+   L  YPGSPKLAR L R QDRLSA+ELHP DC  L  LFEGD+Q RV  LDGWLALG H+PPKEKRG+VLVDPPFE EGE+DR+VDGLARA+RR+A+GTYCLWYPIK G   P+FH  ++AL I ++LC EL+V +  + TGL+GSGLVI+NPPFTL  +L  +LP L   L+
Sbjct:   58 GEWRDGIGRLMEADLPANVSLLLEPYLGAVRELNADGALTLYPGSPKLARMLFRPQDRLSAMELHPDDCRSLSRLFEGDYQVRVTELDGWLALGAHLPPKEKRGIVLVDPPFEAEGEYDRLVDGLARAYRRFATGTYCLWYPIKKGAPIPAFHEALKALEIPKMLCAELSVRSDRDATGLSGSGLVIVNPPFTLKNDLHAVLPELKRVLA 267
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BLAST of mRNA_M-pyrifera_M_contig106023.1298.1 vs. uniprot
Match: W8IG69_ENSAD (Ribosomal RNA large subunit methyltransferase J n=31 Tax=Rhizobiaceae TaxID=82115 RepID=W8IG69_ENSAD)

HSP 1 Score: 285 bits (728), Expect = 6.770e-94
Identity = 131/210 (62.38%), Postives = 161/210 (76.67%), Query Frame = 1 
Query:    1 GEWKDGIGRLLSGNLPEPAQILLEPYLSVVRALNSGKTLNQYPGSPKLARALLRKQDRLSAIELHPHDCGKLRALFEGDFQTRVIALDGWLALGGHVPPKEKRGLVLVDPPFEKEGEFDRIVDGLARAHRRWASGTYCLWYPIKAGNHTPSFHAKMRALGISRILCVELNVLNQAETTGLAGSGLVIINPPFTLYCELEVLLPALHGCLS 630
            GEW+DGIGRLL G+LP P   +LEPYL+ VR LN+G  L +YPGSPKL R L R QDRLSA+ELHP D   L  LF+GDFQ+R+  LDGWLALG H+PPKEKRGL+LVDPPFE EGE++R+ DGLAR +RR+A GT+CLWYP+K      +FH  ++AL I ++LC EL V +  +TTGL+GSGL+I+NPPFTL  EL+VLLP L   L 
Sbjct:   58 GEWRDGIGRLLEGDLPAPVAAILEPYLATVRELNTGSELTRYPGSPKLVRMLFRPQDRLSAMELHPDDYETLHRLFDGDFQSRITELDGWLALGAHLPPKEKRGLILVDPPFEIEGEYERLADGLARGYRRFAGGTFCLWYPLKKNAPIKAFHEALKALNIPKMLCAELAVRSDRDTTGLSGSGLIIVNPPFTLKSELDVLLPFLKTRLG 267
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BLAST of mRNA_M-pyrifera_M_contig106023.1298.1 vs. uniprot
Match: A0A0L8C5T6_ENSAD (Ribosomal RNA large subunit methyltransferase J n=5 Tax=Sinorhizobium/Ensifer group TaxID=227292 RepID=A0A0L8C5T6_ENSAD)

HSP 1 Score: 283 bits (725), Expect = 1.930e-93
Identity = 131/210 (62.38%), Postives = 161/210 (76.67%), Query Frame = 1 
Query:    1 GEWKDGIGRLLSGNLPEPAQILLEPYLSVVRALNSGKTLNQYPGSPKLARALLRKQDRLSAIELHPHDCGKLRALFEGDFQTRVIALDGWLALGGHVPPKEKRGLVLVDPPFEKEGEFDRIVDGLARAHRRWASGTYCLWYPIKAGNHTPSFHAKMRALGISRILCVELNVLNQAETTGLAGSGLVIINPPFTLYCELEVLLPALHGCLS 630
            GEW+DGIGRLL G+LP P   +LEPYL+ VR LN G  L +YPGSPKL R L R QDRLSA+ELHP D   L  LF+GDFQ+R+  LDGWLALG H+PPKEKRGL+LVDPPFE EGE++R+ DGLA+ +RR+A GT+CLWYP+K      +FH  ++AL I ++LC EL+V +  ETTGL+GSGL+I+NPPFTL  EL+VLLP L   L 
Sbjct:   58 GEWRDGIGRLLEGDLPAPVAAVLEPYLAAVRELNPGPELTRYPGSPKLVRMLFRPQDRLSAMELHPDDYETLHRLFDGDFQSRITELDGWLALGAHLPPKEKRGLILVDPPFEIEGEYERLADGLAKGYRRFAGGTFCLWYPLKKNAPIKAFHEALKALEIPKMLCAELSVRSDRETTGLSGSGLIIVNPPFTLKSELDVLLPFLKTRLG 267
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BLAST of mRNA_M-pyrifera_M_contig106023.1298.1 vs. uniprot
Match: A0A346YS11_9HYPH (Ribosomal RNA large subunit methyltransferase J n=2 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A346YS11_9HYPH)

HSP 1 Score: 282 bits (722), Expect = 4.240e-93
Identity = 133/210 (63.33%), Postives = 156/210 (74.29%), Query Frame = 1 
Query:    1 GEWKDGIGRLLSGNLPEPAQILLEPYLSVVRALNSGKTLNQYPGSPKLARALLRKQDRLSAIELHPHDCGKLRALFEGDFQTRVIALDGWLALGGHVPPKEKRGLVLVDPPFEKEGEFDRIVDGLARAHRRWASGTYCLWYPIKAGNHTPSFHAKMRALGISRILCVELNVLNQAETTGLAGSGLVIINPPFTLYCELEVLLPALHGCLS 630
            GEW+DGIGRLL   LP P   LLEPYLS +R LN    +  YPGSPKLAR L R QDRLSA+ELHP D  +L  LFEGDFQ R   LDGWLALG H+PPKEKRG++LVDPPFE+EGE+ R+V GLA A+RR+A GTYCLWYPIK G    +FH +++AL I ++LC EL V +  ETTGL GSGLVI+NPPFTL  EL  +LP L   L+
Sbjct:   58 GEWRDGIGRLLEAELPAPVAELLEPYLSAIRELNPTGAIKLYPGSPKLARMLFRPQDRLSAMELHPEDYHRLHNLFEGDFQVRATQLDGWLALGAHLPPKEKRGVILVDPPFEEEGEYGRLVSGLANAYRRFAGGTYCLWYPIKKGAPIKAFHEELQALDIPKMLCTELTVRSDRETTGLTGSGLVIVNPPFTLKDELHTMLPVLKSVLA 267
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BLAST of mRNA_M-pyrifera_M_contig106023.1298.1 vs. uniprot
Match: A0A5C4JP28_9HYPH (Ribosomal RNA large subunit methyltransferase J n=1 Tax=Martelella lutilitoris TaxID=2583532 RepID=A0A5C4JP28_9HYPH)

HSP 1 Score: 280 bits (717), Expect = 2.870e-92
Identity = 134/210 (63.81%), Postives = 157/210 (74.76%), Query Frame = 1 
Query:    1 GEWKDGIGRLLSGNLPEPAQILLEPYLSVVRALNSGKTLNQYPGSPKLARALLRKQDRLSAIELHPHDCGKLRALFEGDFQTRVIALDGWLALGGHVPPKEKRGLVLVDPPFEKEGEFDRIVDGLARAHRRWASGTYCLWYPIKAGNHTPSFHAKMRALGISRILCVELNVLNQAETTGLAGSGLVIINPPFTLYCELEVLLPALHGCLS 630
            GEW+ GIGRLL+  +P  A  LL PYL  VRALN+   +  YPGSPKLAR L+RKQDRLS +ELH  D   L+A F GD Q R   LDGWLAL GH+PPKE+RGLVLVDPPFEKEGEF+R+VDGLA+AHRR+A+G YCLWYPIK G    +FHA ++ LGI +ILC EL V +  ET GL GSGLVI+NPPFTL  EL +LLP L   L+
Sbjct:   58 GEWQTGIGRLLATEIPNDAAALLAPYLDAVRALNAAPQITAYPGSPKLARMLMRKQDRLSLMELHETDFATLQARFAGDHQVRATMLDGWLALAGHLPPKERRGLVLVDPPFEKEGEFERLVDGLAKAHRRFATGIYCLWYPIKKGAPVAAFHAALQGLGIPKILCAELTVRSDRETEGLTGSGLVIVNPPFTLKAELNILLPFLKERLA 267
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BLAST of mRNA_M-pyrifera_M_contig106023.1298.1 vs. uniprot
Match: A0A178YAW4_SINSA (Ribosomal RNA large subunit methyltransferase J n=4 Tax=Rhizobiaceae TaxID=82115 RepID=A0A178YAW4_SINSA)

HSP 1 Score: 280 bits (715), Expect = 5.590e-92
Identity = 132/210 (62.86%), Postives = 159/210 (75.71%), Query Frame = 1 
Query:    1 GEWKDGIGRLLSGNLPEPAQILLEPYLSVVRALNSGKTLNQYPGSPKLARALLRKQDRLSAIELHPHDCGKLRALFEGDFQTRVIALDGWLALGGHVPPKEKRGLVLVDPPFEKEGEFDRIVDGLARAHRRWASGTYCLWYPIKAGNHTPSFHAKMRALGISRILCVELNVLNQAETTGLAGSGLVIINPPFTLYCELEVLLPALHGCLS 630
            GEW++GIGRL    LP P   +L PYLS VR LN    L  YPGSPKLAR L R QDRLSA+ELHP D   L ALFEGDFQ+R+  LDGWLALG H+PPKEKRGLVLVDPPFE EGE++R+V+GLA+AHRR+A G +CLWYP+K G     FHA ++AL I ++LC EL+V +  + TGLAGSGL+I+NPP+TL  EL+VLLP L   L+
Sbjct:   58 GEWREGIGRLTEAELPAPVADILGPYLSAVRDLNPEGGLTHYPGSPKLARLLFRPQDRLSAMELHPEDYETLHALFEGDFQSRITRLDGWLALGAHLPPKEKRGLVLVDPPFEVEGEYERLVEGLAKAHRRFAGGIFCLWYPLKKGAPVKDFHAALKALEIPKMLCAELSVRSDRDVTGLAGSGLIIVNPPYTLKGELDVLLPFLKARLA 267
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BLAST of mRNA_M-pyrifera_M_contig106023.1298.1 vs. uniprot
Match: A0A4S5JCK7_9HYPH (Ribosomal RNA large subunit methyltransferase J n=6 Tax=Sinorhizobium/Ensifer group TaxID=227292 RepID=A0A4S5JCK7_9HYPH)

HSP 1 Score: 280 bits (715), Expect = 6.170e-92
Identity = 132/210 (62.86%), Postives = 160/210 (76.19%), Query Frame = 1 
Query:    1 GEWKDGIGRLLSGNLPEPAQILLEPYLSVVRALNSGKTLNQYPGSPKLARALLRKQDRLSAIELHPHDCGKLRALFEGDFQTRVIALDGWLALGGHVPPKEKRGLVLVDPPFEKEGEFDRIVDGLARAHRRWASGTYCLWYPIKAGNHTPSFHAKMRALGISRILCVELNVLNQAETTGLAGSGLVIINPPFTLYCELEVLLPALHGCLS 630
            GEW+DGIGRLL   LP P  ++LEPYLS VR LN    +  YPGSPKL R L R QDRLSA+ELHP D   L  LFEGDFQ+R+  LDGWLALG H+PPKEKRGL+LVDPPFE EGE++R+VDGLA+ +RR+A G +CLWYP+K G     FH  ++AL I ++LCVEL+V +  +TTGLAGSGLVI+NPPFTL  EL++LLP L   L+
Sbjct:   58 GEWRDGIGRLLDIELPAPVAVILEPYLSAVRDLNPDGGITHYPGSPKLVRMLFRPQDRLSAMELHPDDYETLHRLFEGDFQSRITHLDGWLALGAHLPPKEKRGLILVDPPFEIEGEYERLVDGLAKGYRRFAGGIFCLWYPLKKGAPIKEFHEALKALEIPKMLCVELSVRSDRDTTGLAGSGLVIVNPPFTLKGELDLLLPFLKTHLA 267
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BLAST of mRNA_M-pyrifera_M_contig106023.1298.1 vs. uniprot
Match: A0A4Q2TJ81_9HYPH (Ribosomal RNA large subunit methyltransferase J n=3 Tax=Ciceribacter TaxID=1648508 RepID=A0A4Q2TJ81_9HYPH)

HSP 1 Score: 279 bits (713), Expect = 1.020e-91
Identity = 131/210 (62.38%), Postives = 158/210 (75.24%), Query Frame = 1 
Query:    1 GEWKDGIGRLLSGNLPEPAQILLEPYLSVVRALNSGKTLNQYPGSPKLARALLRKQDRLSAIELHPHDCGKLRALFEGDFQTRVIALDGWLALGGHVPPKEKRGLVLVDPPFEKEGEFDRIVDGLARAHRRWASGTYCLWYPIKAGNHTPSFHAKMRALGISRILCVELNVLNQAETTGLAGSGLVIINPPFTLYCELEVLLPALHGCLS 630
            GEW+DGIGRL+   LPE    LL PYL  +R LN    +  YPGSPKLAR L R QDRLSA+ELHP D   L  LFEGD+Q RV  LDGWLALG H+PPKEKRG+VLVDPPFE+ GE++R+VDGLA+A+RR+A+GTYCLWYPIK G     FH  ++AL I ++LC EL+V +  ETTGL+GSGL+I+NPPFTL  EL +LLP L   L+
Sbjct:   58 GEWRDGIGRLMEAELPEGVAALLAPYLDAIRTLNPQGPITLYPGSPKLARMLFRPQDRLSAMELHPDDSRALARLFEGDYQVRVTELDGWLALGAHLPPKEKRGIVLVDPPFEEAGEYERLVDGLAKAYRRFATGTYCLWYPIKKGAPIAEFHEALKALEIPKMLCAELSVRSDRETTGLSGSGLIIVNPPFTLKDELHLLLPELKRVLA 267
[Close]
BLAST of mRNA_M-pyrifera_M_contig106023.1298.1 vs. uniprot
Match: A0A0M3BRT1_9HYPH (Ribosomal RNA large subunit methyltransferase J n=3 Tax=Rhizobiaceae TaxID=82115 RepID=A0A0M3BRT1_9HYPH)

HSP 1 Score: 278 bits (712), Expect = 1.400e-91
Identity = 131/210 (62.38%), Postives = 159/210 (75.71%), Query Frame = 1 
Query:    1 GEWKDGIGRLLSGNLPEPAQILLEPYLSVVRALNSGKTLNQYPGSPKLARALLRKQDRLSAIELHPHDCGKLRALFEGDFQTRVIALDGWLALGGHVPPKEKRGLVLVDPPFEKEGEFDRIVDGLARAHRRWASGTYCLWYPIKAGNHTPSFHAKMRALGISRILCVELNVLNQAETTGLAGSGLVIINPPFTLYCELEVLLPALHGCLS 630
            GEW+DGIGRL+   LP     LLEPYL+ V+ LN G  +  YPGSPKLAR L R QDRLSA+ELHP D G+L  LFEGDFQ RV  LDGWLALG H+PPKEKRG+VLVDPPFE+EGE+ RIV+GLA A++R++ GTYCLWYP+K G    +FH +++AL I ++LC EL V +  ETTGL GSGL+I+NPPFTL  EL  LLP L   ++
Sbjct:   58 GEWRDGIGRLMEAELPVDIAELLEPYLAAVKELNPGGAMKLYPGSPKLARMLFRPQDRLSAMELHPEDHGRLARLFEGDFQVRVTELDGWLALGAHLPPKEKRGIVLVDPPFEEEGEYQRIVNGLANAYKRFSGGTYCLWYPLKKGAPIKAFHEELQALEIPKMLCAELIVKSDRETTGLIGSGLIIVNPPFTLKNELHALLPFLKTVMA 267
[Close]
BLAST of mRNA_M-pyrifera_M_contig106023.1298.1 vs. uniprot
Match: A0A095WKZ1_9HYPH (Ribosomal RNA large subunit methyltransferase J n=4 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A095WKZ1_9HYPH)

HSP 1 Score: 278 bits (711), Expect = 1.980e-91
Identity = 133/210 (63.33%), Postives = 155/210 (73.81%), Query Frame = 1 
Query:    1 GEWKDGIGRLLSGNLPEPAQILLEPYLSVVRALNSGKTLNQYPGSPKLARALLRKQDRLSAIELHPHDCGKLRALFEGDFQTRVIALDGWLALGGHVPPKEKRGLVLVDPPFEKEGEFDRIVDGLARAHRRWASGTYCLWYPIKAGNHTPSFHAKMRALGISRILCVELNVLNQAETTGLAGSGLVIINPPFTLYCELEVLLPALHGCLS 630
            GEW+DGIGRLL   LP     LLEPYLS VR LN    L  YPGSPKLAR L R QDRLSA+ELHP D  +L  LFEGDF+ RV  LDGWLALG H+PPKEKRG++LVDPP+E+EGE+ R+V GLA A++R+  GTYCLWYPIK G     FH +++AL I ++LC EL V +  ETTGL GSGLVI+NPPFTL  EL VLLP L   L+
Sbjct:   58 GEWRDGIGRLLEAELPANVSELLEPYLSTVRELNPDGALKLYPGSPKLARMLFRPQDRLSAMELHPEDFNRLHNLFEGDFRVRVTELDGWLALGAHLPPKEKRGIILVDPPYEEEGEYQRLVKGLANAYKRFPGGTYCLWYPIKKGAPIKVFHEELQALDIPKMLCTELTVRSDRETTGLTGSGLVIVNPPFTLKDELHVLLPVLKTILA 267
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106023.1298.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D3BGF5_RHISP5.710e-9664.29Ribosomal RNA large subunit methyltransferase J n=... [more]
W8IG69_ENSAD6.770e-9462.38Ribosomal RNA large subunit methyltransferase J n=... [more]
A0A0L8C5T6_ENSAD1.930e-9362.38Ribosomal RNA large subunit methyltransferase J n=... [more]
A0A346YS11_9HYPH4.240e-9363.33Ribosomal RNA large subunit methyltransferase J n=... [more]
A0A5C4JP28_9HYPH2.870e-9263.81Ribosomal RNA large subunit methyltransferase J n=... [more]
A0A178YAW4_SINSA5.590e-9262.86Ribosomal RNA large subunit methyltransferase J n=... [more]
A0A4S5JCK7_9HYPH6.170e-9262.86Ribosomal RNA large subunit methyltransferase J n=... [more]
A0A4Q2TJ81_9HYPH1.020e-9162.38Ribosomal RNA large subunit methyltransferase J n=... [more]
A0A0M3BRT1_9HYPH1.400e-9162.38Ribosomal RNA large subunit methyltransferase J n=... [more]
A0A095WKZ1_9HYPH1.980e-9163.33Ribosomal RNA large subunit methyltransferase J n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig106023contigM-pyrifera_M_contig106023:1..630 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score279.3
Seed ortholog evalue1.5e-72
Seed eggNOG ortholog1057002.KB905370_gene5036
Preferred namerlmJ
KEGG koko:K07115
Hectar predicted targeting categoryother localisation
GOsGO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008988,GO:0009451,GO:0009987,GO:0010467,GO:0015976,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036307,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360
EggNOG free text desc.Specifically methylates the adenine in position 2030 of 23S rRNA
EggNOG OGs1MWGA@1224,2TU5K@28211,4B7YU@82115,COG2961@1,COG2961@2
EC2.1.1.266
COG Functional cat.S
Best tax levelRhizobiaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Exons1
Model size630
Cds size630
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815569.8793578-CDS-M-pyrifera_M_contig106023:0..6301622815569.8793578-CDS-M-pyrifera_M_contig106023:0..630Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig106023 1..630 -
1692277468.3718853-CDS-M-pyrifera_M_contig106023:0..6301692277468.3718853-CDS-M-pyrifera_M_contig106023:0..630Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig106023 1..630 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig106023.1298.1prot_M-pyrifera_M_contig106023.1298.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig106023 1..630 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig106023.1298.1

>prot_M-pyrifera_M_contig106023.1298.1 ID=prot_M-pyrifera_M_contig106023.1298.1|Name=mRNA_M-pyrifera_M_contig106023.1298.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp
GEWKDGIGRLLSGNLPEPAQILLEPYLSVVRALNSGKTLNQYPGSPKLAR
ALLRKQDRLSAIELHPHDCGKLRALFEGDFQTRVIALDGWLALGGHVPPK
EKRGLVLVDPPFEKEGEFDRIVDGLARAHRRWASGTYCLWYPIKAGNHTP
SFHAKMRALGISRILCVELNVLNQAETTGLAGSGLVIINPPFTLYCELEV
LLPALHGCLS
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mRNA from alignment at M-pyrifera_M_contig106023:1..630-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig106023.1298.1 ID=mRNA_M-pyrifera_M_contig106023.1298.1|Name=mRNA_M-pyrifera_M_contig106023.1298.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig106023:1..630- (Macrocystis pyrifera P11B4 male)
GGTGAGTGGAAGGACGGCATCGGACGCTTGCTTTCGGGCAATCTGCCTGA
GCCTGCCCAGATCCTTCTCGAACCCTATCTGAGTGTGGTGCGTGCCCTGA
ACAGCGGCAAGACACTGAACCAATACCCAGGATCCCCAAAGCTTGCGCGC
GCCCTGCTGAGGAAGCAGGACCGGCTGTCGGCCATCGAACTGCATCCCCA
TGATTGCGGCAAACTTCGCGCTCTCTTCGAGGGCGATTTTCAAACACGCG
TTATTGCTCTCGACGGGTGGCTGGCGCTCGGCGGGCACGTGCCACCGAAA
GAAAAACGTGGTCTGGTGCTGGTCGATCCACCCTTTGAGAAAGAAGGCGA
ATTTGACCGGATCGTCGATGGGTTGGCGCGCGCGCATCGCCGCTGGGCCA
GCGGTACATATTGCCTGTGGTATCCTATCAAGGCTGGAAACCACACGCCC
TCTTTTCACGCCAAAATGCGCGCATTGGGCATCAGCCGCATTCTTTGCGT
GGAATTGAATGTCCTCAACCAGGCTGAAACCACCGGCCTTGCCGGATCAG
GGCTCGTCATCATCAATCCGCCCTTTACGCTTTATTGCGAGTTGGAGGTG
CTGTTGCCGGCGCTGCATGGTTGTCTATCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig106023:1..630-

>mRNA_M-pyrifera_M_contig106023.1298.1 ID=mRNA_M-pyrifera_M_contig106023.1298.1|Name=mRNA_M-pyrifera_M_contig106023.1298.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1260bp|location=Sequence derived from alignment at M-pyrifera_M_contig106023:1..630- (Macrocystis pyrifera P11B4 male)
GGTGAGTGGAAGGACGGCATCGGACGCTTGCTTTCGGGCAATCTGCCTGA
GCCTGCCCAGATCCTTCTCGAACCCTATCTGAGTGTGGTGCGTGCCCTGA
ACAGCGGCAAGACACTGAACCAATACCCAGGATCCCCAAAGCTTGCGCGC
GCCCTGCTGAGGAAGCAGGACCGGCTGTCGGCCATCGAACTGCATCCCCA
TGATTGCGGCAAACTTCGCGCTCTCTTCGAGGGCGATTTTCAAACACGCG
TTATTGCTCTCGACGGGTGGCTGGCGCTCGGCGGGCACGTGCCACCGAAA
GAAAAACGTGGTCTGGTGCTGGTCGATCCACCCTTTGAGAAAGAAGGCGA
ATTTGACCGGATCGTCGATGGGTTGGCGCGCGCGCATCGCCGCTGGGCCA
GCGGTACATATTGCCTGTGGTATCCTATCAAGGCTGGAAACCACACGCCC
TCTTTTCACGCCAAAATGCGCGCATTGGGCATCAGCCGCATTCTTTGCGT
GGAATTGAATGTCCTCAACCAGGCTGAAACCACCGGCCTTGCCGGATCAG
GGCTCGTCATCATCAATCCGCCCTTTACGCTTTATTGCGAGTTGGAGGTG
CTGTTGCCGGCGCTGCATGGTTGTCTATCCGGTGAGTGGAAGGACGGCAT
CGGACGCTTGCTTTCGGGCAATCTGCCTGAGCCTGCCCAGATCCTTCTCG
AACCCTATCTGAGTGTGGTGCGTGCCCTGAACAGCGGCAAGACACTGAAC
CAATACCCAGGATCCCCAAAGCTTGCGCGCGCCCTGCTGAGGAAGCAGGA
CCGGCTGTCGGCCATCGAACTGCATCCCCATGATTGCGGCAAACTTCGCG
CTCTCTTCGAGGGCGATTTTCAAACACGCGTTATTGCTCTCGACGGGTGG
CTGGCGCTCGGCGGGCACGTGCCACCGAAAGAAAAACGTGGTCTGGTGCT
GGTCGATCCACCCTTTGAGAAAGAAGGCGAATTTGACCGGATCGTCGATG
GGTTGGCGCGCGCGCATCGCCGCTGGGCCAGCGGTACATATTGCCTGTGG
TATCCTATCAAGGCTGGAAACCACACGCCCTCTTTTCACGCCAAAATGCG
CGCATTGGGCATCAGCCGCATTCTTTGCGTGGAATTGAATGTCCTCAACC
AGGCTGAAACCACCGGCCTTGCCGGATCAGGGCTCGTCATCATCAATCCG
CCCTTTACGCTTTATTGCGAGTTGGAGGTGCTGTTGCCGGCGCTGCATGG
TTGTCTATCC
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