mRNA_M-pyrifera_M_contig106015.1291.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig106015.1291.1
Unique NamemRNA_M-pyrifera_M_contig106015.1291.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig106015.1291.1 vs. uniprot
Match: A0A7S4MFU2_9EUKA (Purple acid phosphatase n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MFU2_9EUKA)

HSP 1 Score: 66.6 bits (161), Expect = 1.030e-11
Identity = 28/37 (75.68%), Postives = 33/37 (89.19%), Query Frame = 1
Query:    4 LQKVEPYAARIPYMTTPGNHETFYNFAAYRYRYQMPV 114
            +QK+EP AARIPYMTT GNHE F++F AYRYR+QMPV
Sbjct:  270 MQKIEPVAARIPYMTTAGNHEEFFDFTAYRYRFQMPV 306          
BLAST of mRNA_M-pyrifera_M_contig106015.1291.1 vs. uniprot
Match: A0A7S2XE34_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XE34_9EUKA)

HSP 1 Score: 58.9 bits (141), Expect = 5.900e-10
Identity = 23/36 (63.89%), Postives = 31/36 (86.11%), Query Frame = 1
Query:    4 LQKVEPYAARIPYMTTPGNHETFYNFAAYRYRYQMP 111
            ++K+EP A R+PYMTTPGNHE ++NF AY+ R+QMP
Sbjct:   14 MRKIEPIAKRVPYMTTPGNHEFWFNFTAYKARFQMP 49          
BLAST of mRNA_M-pyrifera_M_contig106015.1291.1 vs. uniprot
Match: A0A7S2FLR2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FLR2_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 9.590e-10
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 1
Query:   10 KVEPYAARIPYMTTPGNHETFYNFAAYRYRYQMP-VDNLG 126
            K+EP A+R+PYM TPGNHE +YNF+AY+ R+ MP  D +G
Sbjct:    3 KIEPIASRVPYMVTPGNHEFWYNFSAYKARFNMPGSDGMG 42          
BLAST of mRNA_M-pyrifera_M_contig106015.1291.1 vs. uniprot
Match: A0A3M6UK94_POCDA (Purple acid phosphatase n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UK94_POCDA)

HSP 1 Score: 58.5 bits (140), Expect = 7.290e-9
Identity = 23/40 (57.50%), Postives = 32/40 (80.00%), Query Frame = 1
Query:    4 LQKVEPYAARIPYMTTPGNHETFYNFAAYRYRYQMPVDNL 123
            + +++P AARIPYMT PGNHET YNF+ Y+ R+ MP D++
Sbjct:  200 MNQIQPIAARIPYMTCPGNHETAYNFSNYKNRFSMPSDDM 239          
BLAST of mRNA_M-pyrifera_M_contig106015.1291.1 vs. uniprot
Match: UPI001D06D04E (acid phosphatase type 7-like n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D06D04E)

HSP 1 Score: 57.8 bits (138), Expect = 1.360e-8
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 1
Query:    4 LQKVEPYAARIPYMTTPGNHETFYNFAAYRYRYQMPVDNLG 126
            ++++EP AA +PYMT+PGNHE  YNF+ Y+ R+ MP DN G
Sbjct:  193 MRQIEPVAAYLPYMTSPGNHENAYNFSHYKERFTMPGDNQG 233          
BLAST of mRNA_M-pyrifera_M_contig106015.1291.1 vs. uniprot
Match: A0A6L2PWM7_COPFO (Purple acid phosphatase n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2PWM7_COPFO)

HSP 1 Score: 56.6 bits (135), Expect = 3.480e-8
Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 1
Query:    4 LQKVEPYAARIPYMTTPGNHETFYNFAAYRYRYQMPVDNLG 126
            + K++P AA +PYMT+PGNHE  YNF+ YR R+ MP D  G
Sbjct:  159 MNKIQPVAAYVPYMTSPGNHEEAYNFSEYRARFTMPGDTEG 199          
BLAST of mRNA_M-pyrifera_M_contig106015.1291.1 vs. uniprot
Match: UPI0009E4498E (acid phosphatase type 7-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E4498E)

HSP 1 Score: 55.8 bits (133), Expect = 5.540e-8
Identity = 21/40 (52.50%), Postives = 31/40 (77.50%), Query Frame = 1
Query:    4 LQKVEPYAARIPYMTTPGNHETFYNFAAYRYRYQMPVDNL 123
            + +++P AAR+PYMT PGNH+T YNF+ Y+ R+ MP  N+
Sbjct:  117 MNEIQPIAARVPYMTCPGNHDTAYNFSNYKNRFSMPGKNM 156          
BLAST of mRNA_M-pyrifera_M_contig106015.1291.1 vs. uniprot
Match: A0A2C9JIY7_BIOGL (Purple acid phosphatase n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JIY7_BIOGL)

HSP 1 Score: 55.5 bits (132), Expect = 8.900e-8
Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 1
Query:    4 LQKVEPYAARIPYMTTPGNHETFYNFAAYRYRYQMPVDN 120
            +++++P AAR+PYMT PGNHE  YNF+ YR R+ MP D+
Sbjct:  184 MRQIQPLAARVPYMTCPGNHEQAYNFSHYRNRFAMPGDD 222          
BLAST of mRNA_M-pyrifera_M_contig106015.1291.1 vs. uniprot
Match: A9V1G0_MONBE (Purple acid phosphatase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V1G0_MONBE)

HSP 1 Score: 54.7 bits (130), Expect = 1.660e-7
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 1
Query:    4 LQKVEPYAARIPYMTTPGNHETFYNFAAYRYRYQMPVDNLG 126
            ++K+E  AA +P MT+PGNHE FYNF  Y+YR+ MP +  G
Sbjct:  334 MRKMESIAAYVPMMTSPGNHEGFYNFHPYKYRFTMPANESG 374          
BLAST of mRNA_M-pyrifera_M_contig106015.1291.1 vs. uniprot
Match: UPI0006D4C88C (acid phosphatase type 7-like isoform X1 n=2 Tax=Halyomorpha halys TaxID=286706 RepID=UPI0006D4C88C)

HSP 1 Score: 54.7 bits (130), Expect = 1.660e-7
Identity = 21/36 (58.33%), Postives = 29/36 (80.56%), Query Frame = 1
Query:    4 LQKVEPYAARIPYMTTPGNHETFYNFAAYRYRYQMP 111
            ++++EP AA +PYM +PGNHE  YNF+ YRYR+ MP
Sbjct:  278 MRQIEPIAAYVPYMVSPGNHEEAYNFSHYRYRFNMP 313          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106015.1291.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4MFU2_9EUKA1.030e-1175.68Purple acid phosphatase n=1 Tax=Vannella sp. CB-20... [more]
A0A7S2XE34_9EUKA5.900e-1063.89Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A7S2FLR2_9STRA9.590e-1060.00Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A3M6UK94_POCDA7.290e-957.50Purple acid phosphatase n=1 Tax=Pocillopora damico... [more]
UPI001D06D04E1.360e-856.10acid phosphatase type 7-like n=1 Tax=Chrysoperla c... [more]
A0A6L2PWM7_COPFO3.480e-856.10Purple acid phosphatase n=1 Tax=Coptotermes formos... [more]
UPI0009E4498E5.540e-852.50acid phosphatase type 7-like n=1 Tax=Orbicella fav... [more]
A0A2C9JIY7_BIOGL8.900e-856.41Purple acid phosphatase n=2 Tax=Biomphalaria glabr... [more]
A9V1G0_MONBE1.660e-753.66Purple acid phosphatase n=1 Tax=Monosiga brevicoll... [more]
UPI0006D4C88C1.660e-758.33acid phosphatase type 7-like isoform X1 n=2 Tax=Ha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig106015contigM-pyrifera_M_contig106015:175..300 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size126
Cds size126
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815569.580942-CDS-M-pyrifera_M_contig106015:174..3001622815569.580942-CDS-M-pyrifera_M_contig106015:174..300Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig106015 175..300 +
1692277468.2187798-CDS-M-pyrifera_M_contig106015:174..3001692277468.2187798-CDS-M-pyrifera_M_contig106015:174..300Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig106015 175..300 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig106015.1291.1prot_M-pyrifera_M_contig106015.1291.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig106015 175..300 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig106015.1291.1

>prot_M-pyrifera_M_contig106015.1291.1 ID=prot_M-pyrifera_M_contig106015.1291.1|Name=mRNA_M-pyrifera_M_contig106015.1291.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=42bp
LLQKVEPYAARIPYMTTPGNHETFYNFAAYRYRYQMPVDNLG
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mRNA from alignment at M-pyrifera_M_contig106015:175..300+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig106015.1291.1 ID=mRNA_M-pyrifera_M_contig106015.1291.1|Name=mRNA_M-pyrifera_M_contig106015.1291.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=126bp|location=Sequence derived from alignment at M-pyrifera_M_contig106015:175..300+ (Macrocystis pyrifera P11B4 male)
TTGTTGCAGAAAGTGGAGCCCTATGCTGCGCGCATTCCGTACATGACGAC CCCAGGCAACCACGAGACGTTCTACAACTTTGCTGCCTACCGCTACCGTT ACCAAATGCCGGTGGATAACTTGGGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig106015:175..300+

>mRNA_M-pyrifera_M_contig106015.1291.1 ID=mRNA_M-pyrifera_M_contig106015.1291.1|Name=mRNA_M-pyrifera_M_contig106015.1291.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=252bp|location=Sequence derived from alignment at M-pyrifera_M_contig106015:175..300+ (Macrocystis pyrifera P11B4 male)
TTGTTGCAGAAAGTGGAGCCCTATGCTGCGCGCATTCCGTACATGACGAC
CCCAGGCAACCACGAGACGTTCTACAACTTTGCTGCCTACCGCTACCGTT
ACCAAATGCCGGTGGATAACTTGGGCTTGTTGCAGAAAGTGGAGCCCTAT
GCTGCGCGCATTCCGTACATGACGACCCCAGGCAACCACGAGACGTTCTA
CAACTTTGCTGCCTACCGCTACCGTTACCAAATGCCGGTGGATAACTTGG
GC
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