mRNA_M-pyrifera_M_contig106002.1284.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig106002.1284.1 vs. uniprot
Match: A0A1B6Y8V7_9BACT (tRNA modification GTPase MnmE n=8 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A1B6Y8V7_9BACT) HSP 1 Score: 263 bits (671), Expect = 6.880e-84 Identity = 132/157 (84.08%), Postives = 148/157 (94.27%), Query Frame = 1
Query: 1 QADLVIYLKDLSSPFSDEERKEIAEFQQRAGETPFILIGTKADIEADKEWRTEFDVKISALKGDQIQSLKKLLKNRALENKHYDASSILVTSSRHRDALQKTQEHIQSALIGLARGMTGDFLSIDLRAALNELGTVTGEITNEHVLDSIFSRFCIGK 471
QADLVIYLKDLS F+++ERKEIA FQ+RAGETPFILIGTKADIEAD+EWRTEFD+KISA++ + I++LK LLKNRALENKHYDASS+LVTSSRHRDALQKT+EHIQ+AL GL G+TGDFLSIDLRAALNELGTVTGEITNEH+LDSIFSRFCIGK
Sbjct: 307 QADLVIYLKDLSQAFTEDERKEIAAFQKRAGETPFILIGTKADIEADREWRTEFDLKISAVEEENIKALKTLLKNRALENKHYDASSLLVTSSRHRDALQKTKEHIQAALTGLENGLTGDFLSIDLRAALNELGTVTGEITNEHILDSIFSRFCIGK 463
BLAST of mRNA_M-pyrifera_M_contig106002.1284.1 vs. uniprot
Match: UPI00035F99E6 (tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI00035F99E6) HSP 1 Score: 259 bits (663), Expect = 9.330e-83 Identity = 129/157 (82.17%), Postives = 147/157 (93.63%), Query Frame = 1
Query: 1 QADLVIYLKDLSSPFSDEERKEIAEFQQRAGETPFILIGTKADIEADKEWRTEFDVKISALKGDQIQSLKKLLKNRALENKHYDASSILVTSSRHRDALQKTQEHIQSALIGLARGMTGDFLSIDLRAALNELGTVTGEITNEHVLDSIFSRFCIGK 471
QADLV+YLKDLS PF+D+ERKEIA+FQ+RAGETPFIL+GTK D E D+EWRTEFD+KISA+ G++I+ LK+LLK+RALENKHYDASS+LVTS+RHRDALQKTQ HIQ+AL GL GMTGDFLSIDLRAALNELGTVTGEITNEH+LDSIFSRFCIGK
Sbjct: 301 QADLVVYLKDLSHPFTDDERKEIADFQKRAGETPFILVGTKKDQEIDEEWRTEFDLKISAIDGEKIKELKQLLKDRALENKHYDASSLLVTSTRHRDALQKTQSHIQAALNGLDLGMTGDFLSIDLRAALNELGTVTGEITNEHILDSIFSRFCIGK 457
BLAST of mRNA_M-pyrifera_M_contig106002.1284.1 vs. uniprot
Match: A0A6A8Q721_9BACT (tRNA modification GTPase MnmE n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q721_9BACT) HSP 1 Score: 254 bits (649), Expect = 1.220e-80 Identity = 128/157 (81.53%), Postives = 145/157 (92.36%), Query Frame = 1
Query: 1 QADLVIYLKDLSSPFSDEERKEIAEFQQRAGETPFILIGTKADIEADKEWRTEFDVKISALKGDQIQSLKKLLKNRALENKHYDASSILVTSSRHRDALQKTQEHIQSALIGLARGMTGDFLSIDLRAALNELGTVTGEITNEHVLDSIFSRFCIGK 471
+A+LVIYLKDLS PF +EERKEIA FQQ++GETPFILIGTKADIEADKEWRTEFD+KISA++G++I LK+LLK+RALENKHYDASS+LVTSSRHRDALQKTQEH+Q+AL GL MTGDFLSIDLRAAL ELGT+TGEIT E +LDSIFSRFCIGK
Sbjct: 302 RANLVIYLKDLSKPFDEEERKEIAAFQQKSGETPFILIGTKADIEADKEWRTEFDLKISAVEGEKINDLKQLLKDRALENKHYDASSLLVTSSRHRDALQKTQEHVQAALKGLNMNMTGDFLSIDLRAALKELGTITGEITTEDLLDSIFSRFCIGK 458
BLAST of mRNA_M-pyrifera_M_contig106002.1284.1 vs. uniprot
Match: A0A2D8CJ25_9BACT (tRNA modification GTPase MnmE n=5 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CJ25_9BACT) HSP 1 Score: 254 bits (648), Expect = 1.690e-80 Identity = 128/157 (81.53%), Postives = 148/157 (94.27%), Query Frame = 1
Query: 1 QADLVIYLKDLSSPFSDEERKEIAEFQQRAGETPFILIGTKADIEADKEWRTEFDVKISALKGDQIQSLKKLLKNRALENKHYDASSILVTSSRHRDALQKTQEHIQSALIGLARGMTGDFLSIDLRAALNELGTVTGEITNEHVLDSIFSRFCIGK 471
QADLVIYLKDLS F+++ERKEIA+FQ+R+ ETPFILIGTKADIEA+KEWRTEFD+KISAL+G++I+ LK+LLK+RALENKHYDASS+LVTS+RHRDALQKT+EH+QSAL LA+ MTGDFLSIDLRAAL ELGT+TGEITNE VLDSIFSRFCIGK
Sbjct: 301 QADLVIYLKDLSQAFTEDERKEIADFQKRSKETPFILIGTKADIEAEKEWRTEFDLKISALEGEKIKELKQLLKDRALENKHYDASSLLVTSTRHRDALQKTKEHVQSALRALAQDMTGDFLSIDLRAALKELGTITGEITNEDVLDSIFSRFCIGK 457
BLAST of mRNA_M-pyrifera_M_contig106002.1284.1 vs. uniprot
Match: A0A3M8G1F7_9BACT (tRNA modification GTPase MnmE n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8G1F7_9BACT) HSP 1 Score: 238 bits (607), Expect = 2.500e-74 Identity = 119/156 (76.28%), Postives = 138/156 (88.46%), Query Frame = 1
Query: 4 ADLVIYLKDLSSPFSDEERKEIAEFQQRAGETPFILIGTKADIEADKEWRTEFDVKISALKGDQIQSLKKLLKNRALENKHYDASSILVTSSRHRDALQKTQEHIQSALIGLARGMTGDFLSIDLRAALNELGTVTGEITNEHVLDSIFSRFCIGK 471
ADL IYLK+L++PF + ER+EIA QQ+AGETPFIL+GTKADIE ++E R FD+KISA GD I LKKLLKNRALENKHYDASSILVTS+RHRD LQK ++H+Q+ALIGL + +TGDFLSIDLRAALNELGT+TGEITNEH+LDSIFSRFCIGK
Sbjct: 303 ADLAIYLKELNTPFDEVERREIAALQQKAGETPFILLGTKADIEIERESRIVFDLKISAANGDGIDRLKKLLKNRALENKHYDASSILVTSTRHRDGLQKAKDHVQAALIGLNQNLTGDFLSIDLRAALNELGTITGEITNEHILDSIFSRFCIGK 458
BLAST of mRNA_M-pyrifera_M_contig106002.1284.1 vs. uniprot
Match: A0A6M1SXM4_9BACT (tRNA modification GTPase MnmE n=1 Tax=Balneolaceae bacterium YR4-1 TaxID=2709311 RepID=A0A6M1SXM4_9BACT) HSP 1 Score: 231 bits (590), Expect = 9.560e-72 Identity = 116/158 (73.42%), Postives = 140/158 (88.61%), Query Frame = 1
Query: 1 QADLVIYLKDLSSPFSDEERKEIAEFQQRAGETPFILIGTKADIEADKEW-RTEFDVKISALKGDQIQSLKKLLKNRALENKHYDASSILVTSSRHRDALQKTQEHIQSALIGLARGMTGDFLSIDLRAALNELGTVTGEITNEHVLDSIFSRFCIGK 471
+ADL +YLKDLS PF+ EER+++ FQ++AG+TPF+L+GTK DIE +KE R ++D+KISAL+G++I+ LKKL+K RALENKHYDASS+LVTSSRHRDAL K QEH++SAL L RGMTGDFLSIDLRAALNELGT+TGEITNE VLDSIFSRFCIGK
Sbjct: 304 EADLAVYLKDLSKPFAPEEREDLGGFQKKAGDTPFVLVGTKKDIELEKEEERLDYDLKISALEGEKIEELKKLMKQRALENKHYDASSLLVTSSRHRDALLKAQEHVRSALQALDRGMTGDFLSIDLRAALNELGTITGEITNEDVLDSIFSRFCIGK 461
BLAST of mRNA_M-pyrifera_M_contig106002.1284.1 vs. uniprot
Match: UPI00110992DA (tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE n=1 Tax=Aliifodinibius saliphilus TaxID=1920650 RepID=UPI00110992DA) HSP 1 Score: 215 bits (547), Expect = 3.230e-65 Identity = 112/158 (70.89%), Postives = 133/158 (84.18%), Query Frame = 1
Query: 1 QADLVIYLKDLSSPFSDEERKEIAEFQQRAGETPFILIGTKADIEAD-KEWRTEFDVKISALKGDQIQSLKKLLKNRALENKHYDASSILVTSSRHRDALQKTQEHIQSALIGLARGMTGDFLSIDLRAALNELGTVTGEITNEHVLDSIFSRFCIGK 471
+ADLV+YLKDLSS + EER+EIA+ Q+ AGETPFILIGTK DI D + R ++D+KISAL+G+ I LKKL+K RALENKHYD+SS+LVTSSRHRDAL+K Q+ +QSAL L RGMTGDFLSIDLR+AL LGT+TGEIT E +LDSIFSRFCIGK
Sbjct: 313 KADLVVYLKDLSSEITIEEREEIAKLQKNAGETPFILIGTKKDIALDIDDERIDYDLKISALEGEAIDKLKKLMKRRALENKHYDSSSLLVTSSRHRDALEKAQQDVQSALQALDRGMTGDFLSIDLRSALKHLGTITGEITTEDILDSIFSRFCIGK 470
BLAST of mRNA_M-pyrifera_M_contig106002.1284.1 vs. uniprot
Match: A0A316TRF8_9BACT (tRNA modification GTPase MnmE n=1 Tax=Rhodohalobacter mucosus TaxID=2079485 RepID=A0A316TRF8_9BACT) HSP 1 Score: 213 bits (542), Expect = 1.450e-64 Identity = 110/160 (68.75%), Postives = 131/160 (81.88%), Query Frame = 1
Query: 1 QADLVIYLKDLSSPFSDEERKEIAEFQQRAGETPFILIGTKADIEA---DKEWRTEFDVKISALKGDQIQSLKKLLKNRALENKHYDASSILVTSSRHRDALQKTQEHIQSALIGLARGMTGDFLSIDLRAALNELGTVTGEITNEHVLDSIFSRFCIGK 471
QADL++YLKDLS P ER+EIA FQ+RAGETPF+L+GTK D+ A DK+ R FD+KISA+K + I +LKKL+K RALENK YD SS+LVTSSRHRDALQK +EHI+ A+ L GMTGDFLSIDLR++L +LG +TGEITNE VLDSIFSRFCIGK
Sbjct: 302 QADLIVYLKDLSQPLHTSEREEIAGFQKRAGETPFLLVGTKLDLAAGRDDKDERIHFDLKISAIKEENIDTLKKLMKQRALENKDYDTSSLLVTSSRHRDALQKAREHIRRAVEALDSGMTGDFLSIDLRSSLRQLGEITGEITNEDVLDSIFSRFCIGK 461
BLAST of mRNA_M-pyrifera_M_contig106002.1284.1 vs. uniprot
Match: A0A2N0VEY6_9BACT (tRNA modification GTPase MnmE n=3 Tax=Rhodohalobacter TaxID=1974209 RepID=A0A2N0VEY6_9BACT) HSP 1 Score: 213 bits (541), Expect = 1.770e-64 Identity = 110/158 (69.62%), Postives = 130/158 (82.28%), Query Frame = 1
Query: 1 QADLVIYLKDLSSPFSDEERKEIAEFQQRAGETPFILIGTKADIE-ADKEWRTEFDVKISALKGDQIQSLKKLLKNRALENKHYDASSILVTSSRHRDALQKTQEHIQSALIGLARGMTGDFLSIDLRAALNELGTVTGEITNEHVLDSIFSRFCIGK 471
QADLV+YLKDLS P EER+E+A FQ+RA TPF+LIGTK D+E +E R ++D+KISAL+ I LKKL+K RALENK YD SS+LVTSSRHRDALQK +E++Q A+ L +GMTGDFLSIDLR+AL ELG +TGEITNEHVLDSIFSRFCIGK
Sbjct: 298 QADLVVYLKDLSLPLDPEEREEVAGFQKRAAATPFLLIGTKLDLEDTSEEERIDYDLKISALEEQNIDDLKKLMKQRALENKDYDTSSLLVTSSRHRDALQKARENVQRAIQALDQGMTGDFLSIDLRSALKELGAITGEITNEHVLDSIFSRFCIGK 455
BLAST of mRNA_M-pyrifera_M_contig106002.1284.1 vs. uniprot
Match: A0A6I7QDX7_9BACT (tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE (Fragment) n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6I7QDX7_9BACT) HSP 1 Score: 211 bits (538), Expect = 5.220e-64 Identity = 111/167 (66.47%), Postives = 130/167 (77.84%), Query Frame = 1
Query: 1 QADLVIYLKDLSSPFSDEERKEIAEFQQRAGETPFILIGTKADIEAD----------KEWRTEFDVKISALKGDQIQSLKKLLKNRALENKHYDASSILVTSSRHRDALQKTQEHIQSALIGLARGMTGDFLSIDLRAALNELGTVTGEITNEHVLDSIFSRFCIGK 471
QADLV+YLKDLS P EER+EIA FQ+RA +TPF+LIGTK D+ KE R +D+KISA++ I LKKL+K+RALENK YD SS+LVTSSRHRD LQK +E++Q A+ L RGMTGDFLSIDLRAAL ELGT+TGE+TNEHVLDSIFSRFCIGK
Sbjct: 291 QADLVVYLKDLSLPLDTEEREEIAGFQKRAAQTPFLLIGTKLDLNQSTPDSLSGGGGKEERIHYDLKISAIEEQNIDELKKLMKHRALENKDYDTSSLLVTSSRHRDGLQKARENVQRAIDALDRGMTGDFLSIDLRAALKELGTITGEVTNEHVLDSIFSRFCIGK 457 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106002.1284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig106002.1284.1 >prot_M-pyrifera_M_contig106002.1284.1 ID=prot_M-pyrifera_M_contig106002.1284.1|Name=mRNA_M-pyrifera_M_contig106002.1284.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp QADLVIYLKDLSSPFSDEERKEIAEFQQRAGETPFILIGTKADIEADKEWback to top mRNA from alignment at M-pyrifera_M_contig106002:3..476+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig106002.1284.1 ID=mRNA_M-pyrifera_M_contig106002.1284.1|Name=mRNA_M-pyrifera_M_contig106002.1284.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=474bp|location=Sequence derived from alignment at M-pyrifera_M_contig106002:3..476+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig106002:3..476+ >mRNA_M-pyrifera_M_contig106002.1284.1 ID=mRNA_M-pyrifera_M_contig106002.1284.1|Name=mRNA_M-pyrifera_M_contig106002.1284.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=948bp|location=Sequence derived from alignment at M-pyrifera_M_contig106002:3..476+ (Macrocystis pyrifera P11B4 male)back to top |