mRNA_M-pyrifera_M_contig10593.1271.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10593.1271.1 vs. uniprot
Match: A0A6H5K768_9PHAE (FPL domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K768_9PHAE) HSP 1 Score: 295 bits (754), Expect = 6.630e-83 Identity = 324/691 (46.89%), Postives = 360/691 (52.10%), Query Frame = 1 Query: 1 QALALNRVVRADLGLTQDPSQESD-----------------DGSPPQNGAGEXXXXXXXXXXXXXXGSSLPRPHRASFADASMRPLGVEILDAAVDALCCLLAPGEAINTA----AGEIGTP----VTVTAAAAAAADCPEEDRGGTGEGGVKGEEGEGERLGRGSLGRGVSPSKSGGDCSF-LPP----PRPRRHHLVLRLCGKVLASLAPXXXXXARYVSGKTSSPSEGTAG---------------------AAARAAAGMEAEPGETVANGNVSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERRRQAVLKRIGDAHAAAAEAVLRGMGDAEGASIIAFEEEVREGRGR-GWDYACSMEPRQHPPPXGXXXXXXXXXXXXXXXXXXXXXTPPRPR--------CSRLPNGWGGRGWRGGAAAGAPQLFAGVFGGAAGVAAAVGQGGRGPD-----GLGPESEEEEEPRENGSLDLEGRECLACSISSPPQSPLEGNASGXXXXXXXXXXXXXXXXXXXXXXXXXXGRRGRSELYLVLDAKSFLLATPDRHRLMNGEIKSAAPLLHLAAAVDPSEEKRLHIRALSHRPVALMRPVTPLGPSTPKPTLPGGXXXXXXXXXXXXXXXXXXXXXXXXVMAEGGGEAGSMCDMQVWACELTFENARSCRLARKHMEGRRLRLRSEKV 1878 QALA N+VVR DLGLTQD + S DG P A E XXXXXX + AD S RPLG+E+LDAAVDALCC+LAP A AGE G V V AA A GEGGV + G E G S+ G + + +PP PRPRRHHLVLRLCGKVLASLAP G P+ T AAA AAGM G G + XXXXXXXX RR A+L+RIGDAHAAAA AVLRGMG AEGA+I+AFEEE+RE R G D A + P+ PPRP C+ G G R + Q F V + G+G P GLGP++ E P E+GSLDL GRECLACS S P LEG S XXXXXXXXXXXXXXXXXXXXXXXXX GRRGRSE+YLVLD K+FLLATPDR+RLMNGEIKS+APLLHLAAAVDP+++KRL IRALSH PVALMRPV STP XXXXXXXX V + GGG+AGSMCDMQ WACEL FEN RSCRLARKHME RRL LRSEK Sbjct: 810 QALAQNQVVRTDLGLTQDTAYNSAQYHEGLPDAAAGGTGAADGQPNGGYAEEGGQQTAAPXXXXXXXXXXXXXXXXAAADLSARPLGMEMLDAAVDALCCMLAPSTATQAVRGEGAGESGEETAGVVAVGTAAGAKXXXXXXALESGGEGGVHPKGGREEAAG----------SERGHESTVPVPPTPFLPRPRRHHLVLRLCGKVLASLAPPLPPAPLSSGGADGDPATATPSPRGEMPPLPEPRTPSASGDTEAAAGTAAGMPVNSGADGGEGGSAVARRKXXXXXXXXG---------------------RRDAMLRRIGDAHAAAAAAVLRGMGAAEGAAIVAFEEEIREWLKRVGLDGAITNLPKMS-------SLILRWSLDNSPPSQRVPAAPPRPPPSSPTSQGCAEADAGSGRARQR--ELRSSLQAFLEVR---QVLRLLSGRGEADPSVLSIAGLGPQAAEH--PWEDGSLDLGGRECLACSFSEP----LEGG-SXXXXXXXXXXXXXXXXXXXXXXXXXXSGRRGRSEMYLVLDDKAFLLATPDRNRLMNGEIKSSAPLLHLAAAVDPADDKRLLIRALSHSPVALMRPVAAPRASTPXXXX-XXXXXXXXXXSSSNVATTEGAVSGASVESSGGGDAGSMCDMQAWACELAFENERSCRLARKHMEDRRLWLRSEKT 1449
BLAST of mRNA_M-pyrifera_M_contig10593.1271.1 vs. uniprot
Match: D7FXA7_ECTSI (FPL domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA7_ECTSI) HSP 1 Score: 276 bits (705), Expect = 1.350e-77 Identity = 331/666 (49.70%), Postives = 368/666 (55.26%), Query Frame = 1 Query: 1 QALALNRVVRADLGLTQDPSQES---DDGSPPQNGAG---------------EXXXXXXXXXXXXXXGSSLPRPHRASFADASMRPLGVEILDAAVDALCCLLAPGEAINTA----AGEIGTPVTVTAAAAAAADCPE-EDRGGTGEGGVKGEEGEGERLGRGSLGRGVSPSKSGGDCSFLPPPRPRRHHLVLRLCGKVLASLAPXXXXXARYVSGKTSSPSEGTAGAAARAAAGMEAEPGETVANGNV--STXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERRRQAVLKRIGDAHAAAAEAVLRGMGDAEGASIIAFEEEVREGRGRG----------WDYACSMEPRQHPPPXGXXXXXXXXXXXXXXXXXXXXXTPPRPRCSRLPNGWGGRGWRGGAAAGAPQLFAGVFGGAAGVAAAVGQGGRGPD-----GLGPESEEEEEPRENGSLDLEGRECLACSISSPPQSPLEGNASGXXXXXXXXXXXXXXXXXXXXXXXXXXGRRGRSELYLVLDAKSFLLATPDRHRLMNGEIKSAAPLLHLAAAVDPSEEKRLHIRALSHRPVALMRPVTPLGPSTPKPTLPGGXXXXXXXXXXXXXXXXXXXXXXXXVMAEGGGEAGSMCDMQVWACELTFENARSCRLARKHMEGRRLRLRSEKV 1878 +ALA N+VVR DLGLTQD +++S +G P AG E XXXXX A D S RPLG+E+LDAAVDALCC+LAP A AGE G T A AA E G GG G EG R RG + FLP RPRRHHLVLRLCGKVLASLAPXXXXX G P+ T + R EPG A+G + XXXXXXXXXXX A+LKRIG+AHAAAA AVLRGMG AEGA+ F + +G W S ++ P P XXXXXXXX R S L Q F V + G+G P GLGP++EE P E+GSLDL GRECLACSIS LEG +SG XXXXXXXXXXXXXXXXXXXXXXX GRRGRSE+YLVLD K+FLLATPDR+RLMNGEIKS+APLLHLAAAVDP+++KRL IRALSH PVALMRPV STP+ + XXXXXXXXXXXXXX XXXXXX +AGSMCDMQ WACELTFEN RSCRLARKHMEGRRLRLRSEK Sbjct: 365 EALAQNQVVRTDLGLTQDAAEDSAQDHEGLPGAAAAGTGAADGQPNGGCAEEEKQQTAAGEGXXXXXXXXXXXXXPAPAVDPSARPLGMEMLDAAVDALCCMLAPSTATQAVGGEGAGESGEETTGVVAVGTAAGTKEGAPSSALGSGGGAGVHPEGGRKEAAGSERGHESTVPVPPTPFLP--RPRRHHLVLRLCGKVLASLAPXXXXXXXXXXGADGDPA--TVTPSPRGETPPVPEPGTPSASGGTEDAAGTAAGMPVNSAADGEEGASAXXXXXXXXXXXXXXXXDAMLKRIGEAHAAAAAAVLRGMGAAEGAAPRRFRKRRLDGAITNLPKMSSLILRWSLDNSPPSQRVPAPPXXXXXXXXXSQGCAEADGGNGRARQRELRSSL------------------QAFLEVR---QVLRLLSGRGEADPSVLSIAGLGPQAEEH--PWEDGSLDLGGRECLACSISES----LEGGSSGRXXXXXXXXXXXXXXXXXXXXXXXS-GRRGRSEMYLVLDDKAFLLATPDRNRLMNGEIKSSAPLLHLAAAVDPADDKRLLIRALSHSPVALMRPVAAPRASTPRSSTGXXXXXXXXXXXXXXXXGAVSXXXXXXXXXX---DAGSMCDMQAWACELTFENERSCRLARKHMEGRRLRLRSEKT 995 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10593.1271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10593.1271.1 >prot_M-pyrifera_M_contig10593.1271.1 ID=prot_M-pyrifera_M_contig10593.1271.1|Name=mRNA_M-pyrifera_M_contig10593.1271.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=627bp QALALNRVVRADLGLTQDPSQESDDGSPPQNGAGEGEGEGESEGKGGSGGback to top mRNA from alignment at M-pyrifera_M_contig10593:4984..10305- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10593.1271.1 ID=mRNA_M-pyrifera_M_contig10593.1271.1|Name=mRNA_M-pyrifera_M_contig10593.1271.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5322bp|location=Sequence derived from alignment at M-pyrifera_M_contig10593:4984..10305- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10593:4984..10305- >mRNA_M-pyrifera_M_contig10593.1271.1 ID=mRNA_M-pyrifera_M_contig10593.1271.1|Name=mRNA_M-pyrifera_M_contig10593.1271.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3762bp|location=Sequence derived from alignment at M-pyrifera_M_contig10593:4984..10305- (Macrocystis pyrifera P11B4 male)back to top |