mRNA_M-pyrifera_M_contig105925.1270.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105925.1270.1 vs. uniprot
Match: A0A6N7FRV5_9ACTN (Flagellar hook-associated protein 2 n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FRV5_9ACTN) HSP 1 Score: 129 bits (324), Expect = 8.360e-32 Identity = 80/208 (38.46%), Postives = 122/208 (58.65%), Query Frame = 1 Query: 1 GEDAEIRIEGTSPFTITSSDDVFEDLIPGVDNTLTGVPDGEVTVDVTRDSAALAGRVKALVDAVNSVLEGLSAASTYDADENQASLLTGNSTVRRARDELTAALINPVSGAALGSVGLTGVTISREGTFEFDQTVFQEAYKKDPAAVQRVFAVPFGSSEESAMSRMLEEVDDATAFGTGYLRSAEDSEKAQVEDLAESITKWDQRLEI 624 G DAEI + G +T TS + F+DL+P VD T+ +TV VT D+ A+A R +ALV+AVN L + + YDA ++S LTG+ +V+R ELT L+ PV G L L G+T+ R+GT FD+ F+EA +P AVQ +F G+ + + ++R+ E A GTGYL +A++S++ +V+ I ++RLE+ Sbjct: 207 GNDAEIEMAG-GLYTATSPTNTFDDLLPNVDVTVKAESTEPITVSVTTDTDAIANRAQALVNAVNGTLSSVKTLTAYDATAKRSSALTGDHSVQRLSQELTRGLVGPVDGTDLIPATL-GITVDRDGTIAFDRVKFEEALADNPEAVQGLFVQAEGAPD-NMITRLAEVAKGAVETGTGYLLTAQESQRDRVKSFTTQIEDIERRLEL 411
BLAST of mRNA_M-pyrifera_M_contig105925.1270.1 vs. uniprot
Match: A0A5Q2RKP9_9ACTN (Flagellar hook-associated protein 2 n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RKP9_9ACTN) HSP 1 Score: 116 bits (291), Expect = 8.240e-27 Identity = 67/148 (45.27%), Postives = 94/148 (63.51%), Query Frame = 1 Query: 43 TITSSDDVFEDLIPGVDNTLTGVPDGEVTVDVTRDSAALAGRVKALVDAVNSVLEGLSAASTYDADENQASLLTGNSTVRRARDELTAALINPVSGAALGSVGLTGVTISREGTFEFDQTVFQEAYKKDPAAVQRVFAVPFGSSEESA 486 T+T + +DL+ GV TL G VTV+V RD+ + +VKALV+AVN L + + YDA+ NQ S LTG++TVR+ LT AL +PV+ ++LGSVGL GV ++R+G FD+ F+ AY DPAAV+R+F G + SA Sbjct: 211 TVTRPTNTIDDLVGGVTLTLKAETTGPVTVNVARDADGITKKVKALVEAVNGALAEMKIRTAYDAETNQRSSLTGDATVRQLTGLLTGALADPVAASSLGSVGLAGVELTRDGKVTFDEAEFKAAYAADPAAVERLFVA--GGTSTSA 356
BLAST of mRNA_M-pyrifera_M_contig105925.1270.1 vs. uniprot
Match: UPI001D1213B3 (flagellar filament capping protein FliD n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D1213B3) HSP 1 Score: 105 bits (262), Expect = 9.700e-23 Identity = 61/152 (40.13%), Postives = 89/152 (58.55%), Query Frame = 1 Query: 1 GEDAEIRI-EGTSPFTITSSDDVFEDLIPGVDNTLTGVPDGEVTVDVTRDSAALAGRVKALVDAVNSVLEGLSAASTYDADENQASLLTGNSTVRRARDELTAALINPVSGAALGSVGLTGVTISREGTFEFDQTVFQEAYKKDPAAVQRVF 453 G+DA++ + G + +TS + F D++ GV T V VTVDV D +A +V++ VD++N+VL + + YDA A+ L G+ TVRR EL A+ + V ++LGS GL G+ I+R GTF FD F AY+ DP AVQ +F Sbjct: 197 GQDAKLVVGSGPGAYDVTSPSNTFSDVLSGVSITAVAVSASPVTVDVAEDVDGMAKQVQSFVDSLNAVLGEIKTRTAYDAATKTAASLNGDPTVRRVAQELIRAVTDQVGASSLGSAGLAGLQITRNGTFTFDSAKFGAAYRDDPDAVQALF 348
BLAST of mRNA_M-pyrifera_M_contig105925.1270.1 vs. uniprot
Match: UPI000F078DF9 (flagellar filament capping protein FliD n=1 Tax=unclassified Nocardioides TaxID=2615069 RepID=UPI000F078DF9) HSP 1 Score: 102 bits (254), Expect = 6.010e-22 Identity = 72/196 (36.73%), Postives = 104/196 (53.06%), Query Frame = 1 Query: 46 ITSSDDVFEDLIPGVDNTLTGVPDGEVTVDVT--RDSAALAGRVKALVDAVNSVLEGLSAASTYDADENQASLLTGNSTVRRARDELTAALINPVSGAALGSVGLTGVTISREGTFEFDQTVFQEAYKKDPAAVQRVFAVPFGSSEESAMSRMLEEVDDATAFGTGYLRSAEDSEKAQVEDLAESITKWDQRLEIR 627 +TS+ + FEDL+PG+D T++ G V VT RD AL+ VKALVDA N++L G+ + + YD+ L G+STVR R++L + I P G +L VG + + R G FD F AY DPA V A F ++ +R+ + D + TG L +A A ++ L +SI W RLE+R Sbjct: 215 VTSATNTFEDLVPGLDVTVSAAAVGTTPVSVTVARDPKALSDSVKALVDAANAILTGIGSQTAYDSKTGSGGQLLGDSTVRALRNDLLES-IYPADGTSLAGVG---IQVDRYGKLVFDADAFASAYAADPAGV----AAKFDTAGNGFAARVEKVGKDYSDPYTGTLTAAITGRTAGIDRLEDSIEAWSVRLELR 402
BLAST of mRNA_M-pyrifera_M_contig105925.1270.1 vs. uniprot
Match: A0A2E8YXC5_9ACTN (Flagellar hook-associated protein 2 n=1 Tax=Nocardioides sp. TaxID=35761 RepID=A0A2E8YXC5_9ACTN) HSP 1 Score: 102 bits (254), Expect = 6.190e-22 Identity = 74/214 (34.58%), Postives = 117/214 (54.67%), Query Frame = 1 Query: 1 GEDAEIRIEGTSPFTITSSDDVFEDLIPGVDNTLTG--VPDGEVTVDVTRDSAALAGRVKALVDAVNSVLEGLSAASTYDADENQASLLTGNSTVRRARDELTAALINPVSGAALGSVGLTGVTISREGTFEFDQTVFQEAYKKDPAAVQRVFAVPFGSSEESAMSRMLEEVDDATAFGTGY---LRSAEDSEKAQVEDLAESITKWDQRLEIR 627 G DA I + + +TS+ F+D++PGV +L G VTV VTRD+A ++G+VKALVDAVN+ L + + AD + +S LTG+ TVR+ R +L I G +L + G + +R+G EFD+T F+ AY DP +F GS + ++ + ATA Y L +A ++ ++ + +S+ +WD+RLE+R Sbjct: 207 GSDASIDLG--AGLVVTSASGTFDDVVPGVSLSLAGSATVGTVVTVGVTRDTAGMSGKVKALVDAVNAALAEIDVKTAVSADGSTSSPLTGDGTVRQLRSQLLDT-IRTTGGTSLAAYG---IQTTRDGRLEFDETTFKAAYAADPTGTADMFTTA-GSGFAAKVASV------ATAASDPYDGSLSTAITGRQSGIDRMEDSVDEWDRRLELR 407
BLAST of mRNA_M-pyrifera_M_contig105925.1270.1 vs. uniprot
Match: A0A7Z8JZY9_9CELL (Flagellar hook-associated protein 2 n=6 Tax=Micrococcales TaxID=85006 RepID=A0A7Z8JZY9_9CELL) HSP 1 Score: 98.6 bits (244), Expect = 1.590e-20 Identity = 73/201 (36.32%), Postives = 109/201 (54.23%), Query Frame = 1 Query: 46 ITSSDDVFEDLIPGVDNTLTGVPDGEVTVDVTRDSAALAGRVKALVDAVNSVLEGLSAASTYDADENQ-------ASLLTGNSTVRRARDELTAALINPVSGAALGSVGLTGVTISREGTFEFDQTVFQEAYKKDPAAVQRVFAVPFGSSEESAMSRMLEEVDDATAFGTGYLRSAEDSEKAQVEDLAESITKWDQRLEIR 627 +TS+ +VFE+L+ GV+ T+T VTVDVTRD + L+ +ALV+ +N+VL +++ +T N A L +GN+TVR + L AA N S +L +G +++ ++GTF FD FQ A KDP AV + GS ++ EV +A GT L+ S ++V+DL + I WD RLE R Sbjct: 225 VTSAKNVFENLVTGVNVTVTAKTTDPVTVDVTRDDSKLSALAQALVNNLNAVLGDITSYTTSKTGTNDEGTAIVTAGLFSGNATVRGLQQSLLAAGSNSASNTSLAGIG---ISLGKDGTFTFDAAAFQTALTKDPDAVGKAVQGVAGSLQKVG------EVASDSAKGTLTLQVQ--SYNSEVKDLTDRIADWDIRLEAR 414
BLAST of mRNA_M-pyrifera_M_contig105925.1270.1 vs. uniprot
Match: A0A1G8BUT5_9MICO (Flagellar hook-associated protein 2 n=1 Tax=Microbacterium sp. 77mftsu3.1 TaxID=1761802 RepID=A0A1G8BUT5_9MICO) HSP 1 Score: 93.6 bits (231), Expect = 9.840e-19 Identity = 67/216 (31.02%), Postives = 111/216 (51.39%), Query Frame = 1 Query: 1 GEDAEIRI-EGT-SPFTITSSDDVFEDLIPGVDNTLTGVPDGEVTVDVTRDSAALAGRVKALVDAVNSVLEGLSAAS-----TYDADENQASLLTGNSTVRRARDELTAALINPVSGAALGSVGLTGVTISREGTFEFDQTVFQEAYKKDPAAVQRVFAVPFGSSEESAMSRMLEEVDDATAFGTGYLRSAEDSEKAQVEDLAESITKWDQRLEIR 627 G DA++R+ GT + +TS + F DL+PGVD T++ VPD V + V D+AA + V + +++ GL+ S T + + + TG+ST+R+ R L A+ PV G + ++G ++ + G +FD+ F A +KDPAAV +VF + SR+ DD + G + S ++ +V + + + WD RLE R Sbjct: 212 GRDAQVRLWAGTDAEQVVTSKTNTFTDLLPGVDITISKVPDAAVDITVATDTAARTTAAETYVKQIQALMTGLANGSKATTATAPGETTRLGVFTGDSTIRQLRTSLANAVQYPVDGVSPSTIG---ISFDKFGALQFDKEKFTAAIEKDPAAVDKVF--------KGISSRVQGVADDYSDKYDGLITSKITGQETEVRAMKKQVESWDVRLEQR 416
BLAST of mRNA_M-pyrifera_M_contig105925.1270.1 vs. uniprot
Match: UPI00177FFD63 (flagellar filament capping protein FliD n=1 Tax=Microbacterium sp. Sa4CUA7 TaxID=2762236 RepID=UPI00177FFD63) HSP 1 Score: 91.7 bits (226), Expect = 4.840e-18 Identity = 66/216 (30.56%), Postives = 109/216 (50.46%), Query Frame = 1 Query: 1 GEDAEIRIEGTSP--FTITSSDDVFEDLIPGVDNTLTGVPDGEVTVDVTRDSAALAGRVKALVDAVNSVLEGLS-----AASTYDADENQASLLTGNSTVRRARDELTAALINPVSGAALGSVGLTGVTISREGTFEFDQTVFQEAYKKDPAAVQRVFAVPFGSSEESAMSRMLEEVDDATAFGTGYLRSAEDSEKAQVEDLAESITKWDQRLEIR 627 G+DA++R+ +P T+TS D+ F DL PGVD T++ +TV V+ D AA A V + +VL G++ A T + TG+STVR + LT A+ +PV + ++G ++I R G FD+ F A + D A+V+ VFA +R+ + D + G + + ++ +V +A+ + +WD RLE+R Sbjct: 217 GQDAQVRLWAGTPAEMTVTSDDNTFTDLFPGVDITVSKASTAPITVSVSADPAARAKAAGEFVSQIKAVLTGIANGSKATAPTTAGGSTTLGVFTGDSTVRALQLALTNAVQHPVDAVSPSTIG---ISIDRYGVLSFDEKKFTAALEADEASVEAVFA--------GVAARVQQTTDQYSDKYDGLVTARITGQEGEVNRIADQLERWDVRLEMR 421
BLAST of mRNA_M-pyrifera_M_contig105925.1270.1 vs. uniprot
Match: UPI001B3132F3 (flagellar filament capping protein FliD n=1 Tax=Naasia sp. SYSU D00057 TaxID=2817380 RepID=UPI001B3132F3) HSP 1 Score: 91.7 bits (226), Expect = 4.880e-18 Identity = 65/202 (32.18%), Postives = 104/202 (51.49%), Query Frame = 1 Query: 43 TITSSDDVFEDLIPGVDNTLTGVPDGEVTVDVTRDSAALAGRVKALVDAVNSVLEGLSAASTYDADENQASL-------LTGNSTVRRARDELTAALINPVSGAALGSVGLTGVTISREGTFEFDQTVFQEAYKKDPAAVQRVFAVPFGSSEESAMSRMLEEVDDATAFGTGYLRSAEDSEKAQVEDLAESITKWDQRLEIR 627 T+TSS + F +++ G D T+ VTV V +D A + V ++++ +S S N A TG+STVR+ +D L A+I+PV G +L ++G ++++R+G+ FD F EA K DPA QR+F+ +A +R+ E +DA+ G+L S ++ V+ L E+I WD RL R Sbjct: 234 TLTSSTNTFAEVLGGTDITVAKAATEPVTVTVAQDGNAASAVASGFVAKLSALFGTISVKSKVTPSTNAAGTPIVSAGSFTGDSTVRQLKDALLTAVIDPVEGKSLSTIG---ISVTRDGSVSFDAAKFGEALKSDPAGTQRMFS--------AAAARVQEVAEDASDSLDGFLTSKVTGQENAVKSLNENIAAWDLRLAKR 424
BLAST of mRNA_M-pyrifera_M_contig105925.1270.1 vs. uniprot
Match: UPI0003709E87 (flagellar filament capping protein FliD n=1 Tax=Actinokineospora enzanensis TaxID=155975 RepID=UPI0003709E87) HSP 1 Score: 91.3 bits (225), Expect = 5.770e-18 Identity = 67/193 (34.72%), Postives = 92/193 (47.67%), Query Frame = 1 Query: 40 FTITSSDDVFEDLIPGVDNTLTGVPDGEVTVDVTRDSAALAGRVKALVDAVNSVLEGLSAASTYDADENQASLLTGNSTVRRARDELTAALINPVSGAALGSVGLTGVTISREGTFEFDQTVFQEAYKKDPAAVQRVFAVPFGSSEESAMSRMLEEVDDATAFGTGYLRSAEDSEKAQVEDLAESITKWDQRL 618 F ITS+D+ + LIPGV T V G +TV + DS+ ++ALV AVNS L + AAS Y+ ++ L GN+ VR RD+L A+ G S GV++ R G +FD T FQ + DP + + G S +S DD T TG L + V L + I+ WD RL Sbjct: 211 FKITSADNTYTGLIPGVTVTANKVDTG-ITVSTSPDSSKATSAMQALVSAVNSALSTIDAASAYNPTTKTSAPLAGNTLVRSLRDQLLGAVSKGTDGGT--SFAANGVSLDRNGQVKFDATAFQNSLAADPTGTKAALSTTLGG-RFSTIS------DDTTNSTTGKLTLVIQNGNTYVRRLTDQISDWDDRL 393 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105925.1270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105925.1270.1 >prot_M-pyrifera_M_contig105925.1270.1 ID=prot_M-pyrifera_M_contig105925.1270.1|Name=mRNA_M-pyrifera_M_contig105925.1270.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=209bp GEDAEIRIEGTSPFTITSSDDVFEDLIPGVDNTLTGVPDGEVTVDVTRDSback to top mRNA from alignment at M-pyrifera_M_contig105925:5..631- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105925.1270.1 ID=mRNA_M-pyrifera_M_contig105925.1270.1|Name=mRNA_M-pyrifera_M_contig105925.1270.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=627bp|location=Sequence derived from alignment at M-pyrifera_M_contig105925:5..631- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105925:5..631- >mRNA_M-pyrifera_M_contig105925.1270.1 ID=mRNA_M-pyrifera_M_contig105925.1270.1|Name=mRNA_M-pyrifera_M_contig105925.1270.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1254bp|location=Sequence derived from alignment at M-pyrifera_M_contig105925:5..631- (Macrocystis pyrifera P11B4 male)back to top |