mRNA_M-pyrifera_M_contig105914.1265.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105914.1265.1 vs. uniprot
Match: A0A2D5XS16_9BACT (Radical SAM core domain-containing protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5XS16_9BACT) HSP 1 Score: 220 bits (560), Expect = 6.850e-64 Identity = 119/209 (56.94%), Postives = 149/209 (71.29%), Query Frame = 1 Query: 1 VSLQTFHVDEVAEVFRDPDTYGIRVLHDEQADLALYHDFEANSGMSQLEAAEMFDEMMAGLRDALPLFAGDAFFYFMQKSHYFLHLAAGSSPDAFIDKCRRAGLGADAPVALEA-DGLGAVSAHEGLQLVPLAFSYKAVVERLGHPLAKAARPDFLTGTFQPELEAQAARTLGSLERRACVLAYAPGATEFVELSPDSARLLEALIAAG 624 VSLQTFH+DEVAEV+ PD +GI++L DE+ADL LYHD+EA+SGM+Q EAAEMF+EMM GLR++LPLF GD FYFMQKSHYFL LA G PD F++ C A L+A D +++ GL L L FSY +V++ LGHPLA+AARPDFLTG F + E +A LG + R VLAY P EF+E+SPD+ +L+EAL AG Sbjct: 509 VSLQTFHIDEVAEVYHQPDQFGIKILSDEEADLQLYHDYEASSGMTQQEAAEMFEEMMTGLRESLPLFKGDNIFYFMQKSHYFLQLARGLRPDEFVELC------AQRKQKLQARDAHPSLTPTTGLGLRDLPFSYTSVIQTLGHPLARAARPDFLTGRFVTDAEEEARAQLGGVPRGQSVLAYDPLNHEFLEISPDARKLIEALGQAG 711
BLAST of mRNA_M-pyrifera_M_contig105914.1265.1 vs. uniprot
Match: A0A518BNB4_9BACT (Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BNB4_9BACT) HSP 1 Score: 213 bits (541), Expect = 4.030e-61 Identity = 122/215 (56.74%), Postives = 146/215 (67.91%), Query Frame = 1 Query: 1 VSLQTFHVDEVAEVFRDPDTYGIRVLHDEQADLALYHDFEANSGMSQLEAAEMFDEMMAGLRDALPLFAGDAFFYFMQKSHYFLHLAAGSSPDAFIDKC-----RRAGLGADAPVALEADGLGAVSAHEGLQLVPLAFSYKAVVERLGHPLAKAARPDFLTGTFQPELEAQAARTLGSLERRACVLAYAPG-ATEFVELSPDSARLLEALIAAGD 627 VSLQTFH+DEVA +RDP+ +GIR+L + ADL LYHD+E+ SGM+Q EAAEMFDEMM+GLR +LPLF+GD F+FMQKSHYFLHLA PDAF C RRA AD + + + L+LV L F Y V+E LGHPLA+A RPDFLTG F +AA LGS+ R VLAYA G ATEFV L+ D AR+LEA+ AGD Sbjct: 508 VSLQTFHIDEVALTYRDPERFGIRILDEPGADLQLYHDYESESGMTQNEAAEMFDEMMSGLRASLPLFSGDNIFWFMQKSHYFLHLARDVKPDAFERACAERTARRAAGSADPSLRVV----------DSLELVELPFRYGEVIETLGHPLARAVRPDFLTGRFVAGARDEAAAVLGSIAPRPSVLAYAGGGATEFVGLTADGARVLEAIAEAGD 712
BLAST of mRNA_M-pyrifera_M_contig105914.1265.1 vs. uniprot
Match: A0A523PRX2_9BACT (Radical SAM protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PRX2_9BACT) HSP 1 Score: 210 bits (534), Expect = 3.100e-60 Identity = 119/215 (55.35%), Postives = 142/215 (66.05%), Query Frame = 1 Query: 1 VSLQTFHVDEVAEVFRDPDTYGIRVLHDEQADLALYHDFEANSGMSQLEAAEMFDEMMAGLRDALPLFAGDAFFYFMQKSHYFLHLAAGSSPDAFIDKC-----RRAGLGADAPVALEADGLGAVSAHEGLQLV--PLAFSYKAVVERLGHPLAKAARPDFLTGTFQPELEAQAARTLGSLERRACVLAYAPGATEFVELSPDSARLLEALIAAG 624 VSLQTFH+DEVA + +P+ +GI +L+DE ADL LYHD+EA SGM+Q EAAEMF+EMMAG R LPLF+GD FYFMQKSHYFLHLA G SPD+F +KC R GAD +A G LV P+AFSY V L HPLA+AARPDFLTG + + E +A R LG+L R VLAY + EFVEL D R+L A+ AG Sbjct: 504 VSLQTFHIDEVAATYTEPEAFGITILNDEDADLQLYHDYEAESGMTQAEAAEMFEEMMAGFRRELPLFSGDNIFYFMQKSHYFLHLARGESPDSFAEKCGARTAARGRRGADRALA------------PGANLVARPIAFSYGEAVAMLAHPLARAARPDFLTGRYVVDAEREAERKLGTLARADRVLAYDGASGEFVELRGDGLRVLNAMREAG 706
BLAST of mRNA_M-pyrifera_M_contig105914.1265.1 vs. uniprot
Match: A0A7C7YVY1_9BACT (Radical SAM protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C7YVY1_9BACT) HSP 1 Score: 207 bits (527), Expect = 3.050e-59 Identity = 112/209 (53.59%), Postives = 143/209 (68.42%), Query Frame = 1 Query: 1 VSLQTFHVDEVAEVFRDPDTYGIRVLHDEQADLALYHDFEANSGMSQLEAAEMFDEMMAGLRDALPLFAGDAFFYFMQKSHYFLHLAAGSSPDAFIDKCRRAGLGADAPVALEADGLGAVSAHEGLQLVPLAFSYKAVVERLGHPLAKAARPDFLTGTFQPELEAQAARTLGSLERRACVLAYAPGATEFVELSPDSARLLEALIAAGD 627 VSLQTFH+DEVA+ +R+P+ +GI++L DE ADL LYHD+ + SGM+Q EAAEMF+E+MAG+R+ LPLFAGD YFMQKSHYFLHLA G++PD F +C A ++ A G+++ G++ L F Y+AV+E L PLA+AARPDFLTG F E QAA L L R A VL Y EF+ L PD +LEAL AAG+ Sbjct: 508 VSLQTFHIDEVAQTYREPEKFGIQILDDEGADLQLYHDYTSESGMTQEEAAEMFEELMAGMREFLPLFAGDNILYFMQKSHYFLHLARGTTPDEFARQCFER-----AERSMPAGAHGSLAVRAGVRTQALPFDYQAVLETLASPLAQAARPDFLTGRFVTSAEDQAAARLAPLGREARVLVYHGAQAEFMTLRPDGLMVLEALRAAGN 711
BLAST of mRNA_M-pyrifera_M_contig105914.1265.1 vs. uniprot
Match: A0A518EQF2_9BACT (Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EQF2_9BACT) HSP 1 Score: 200 bits (508), Expect = 2.070e-56 Identity = 115/213 (53.99%), Postives = 141/213 (66.20%), Query Frame = 1 Query: 1 VSLQTFHVDEVAEVFRDPDTYGIRVLHDEQADLALYHDFEANSGMSQLEAAEMFDEMMAGLRDALPLFAGDAFFYFMQKSHYFLHLAAGSSPDAFIDKC-----RRAGLGADAPVALEADGLGAVSAHEGLQLVPLAFSYKAVVERLGHPLAKAARPDFLTGTFQPELEAQAARTLGSLERRACVLAYAPGATEFVELSPDSARLLEALIAAG 624 VSLQTFH+DEVA+ ++ PD +GIRVL + DLALYHD+ SGM+Q EAAEMF+EMMA R LP+F+GD FYFMQKSHYFLHLA G++PD F+++C R GA+ DGL S GL VPLAFS+ V +G PLA+AARPDFLTG F + EA AA L L VL Y P EF+E+ PD ++L+AL AAG Sbjct: 529 VSLQTFHIDEVAKTYKQPDEFGIRVL-EADGDLALYHDYVCESGMTQEEAAEMFEEMMASFRRNLPIFSGDNIFYFMQKSHYFLHLANGTTPDQFVERCIDRTNSRTARGAE-------DGL---SVSPGLASVPLAFSHSDAVRTMGDPLARAARPDFLTGRFVKDAEAVAAERLKPLPPTDRVLLYDPENGEFIEVRPDGLKVLKALEAAG 730
BLAST of mRNA_M-pyrifera_M_contig105914.1265.1 vs. uniprot
Match: A0A2E6D590_9BACT (Radical SAM core domain-containing protein n=3 Tax=cellular organisms TaxID=131567 RepID=A0A2E6D590_9BACT) HSP 1 Score: 191 bits (484), Expect = 4.710e-53 Identity = 107/209 (51.20%), Postives = 136/209 (65.07%), Query Frame = 1 Query: 1 VSLQTFHVDEVAEVFRDPDTYGIRVLHDEQADLALYHDFEANSGMSQLEAAEMFDEMMAGLRDALPLFAGDAFFYFMQKSHYFLHLAAGSSPDAFIDKCRRAGLGADAPVALEADGLGAVSAHEGLQLVPLAFSYKAVVERLGHPLAKAARPDFLTGTFQPELEAQAARTLGSLERRACVLAYAPGATEFVELSPDSARLLEALIAAGD 627 VSLQTFH+DEVA +RDP+ + I++L DL LYHD+ + GM+Q EAAEMFDEMM LR LP+F+GD +YFMQKSHYFLHLA G++PD F+ +C++ +A A EA GL +A +P FS+ A L HPLA+AARPDFLTG F + +A A L L + CVL Y EFVELS D R+LEA+ AG+ Sbjct: 510 VSLQTFHIDEVALTYRDPEQFNIKILDGAGTDLQLYHDYLSEQGMTQQEAAEMFDEMMNALRADLPIFSGDNIYYFMQKSHYFLHLARGTTPDEFVAQCQQR---TEAHQAREAAGLLRANASRTSATLP--FSHVAAANTLAHPLARAARPDFLTGRFVADAQAVAEEQLEPLPPQECVLVYDEVGHEFVELSRDGLRVLEAIERAGN 713
BLAST of mRNA_M-pyrifera_M_contig105914.1265.1 vs. uniprot
Match: A0A518D1X9_9BACT (Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518D1X9_9BACT) HSP 1 Score: 186 bits (471), Expect = 2.970e-51 Identity = 109/209 (52.15%), Postives = 129/209 (61.72%), Query Frame = 1 Query: 1 VSLQTFHVDEVAEVFRDPDTYGIRVLHDEQADLALYHDFEANSGMSQLEAAEMFDEMMAGLRDALPLFAGDAFFYFMQKSHYFLHLAAGSSPDAFIDKCRRAGLGADAPVALEADGLGAVSAHEGLQLVPLAFSYKAVVERLGHPLAKAARPDFLTGTFQPELEAQAARTLGSLERRACVLAYAP-GATEFVELSPDSARLLEALIAAG 624 VSLQTFH+DEVA + PD +GI VL DL LYHD+E+ GMSQ EAAEMFDEMM LR PLF+ D +FMQKSHYFLHLA G++PD F CR P E D AV+ EGL V + +SY VE+L HPLA+A RPDF+TG + +A LG+LE VL +AP A F EL PD LL+AL AAG Sbjct: 504 VSLQTFHIDEVARTYHHPDEFGITVLDGAGTDLQLYHDYESARGMSQSEAAEMFDEMMGELRQHFPLFSADNVLFFMQKSHYFLHLARGTTPDEFAAACRERAQALTDP---EDDADFAVA--EGLSRVEIPYSYARCVEKLAHPLARAIRPDFMTGRYVHGAAERARAALGTLEPTTRVLVHAPRAAAPFTELRPDGLALLDALDAAG 707
BLAST of mRNA_M-pyrifera_M_contig105914.1265.1 vs. uniprot
Match: A0A521KN73_9BACT (Radical SAM protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521KN73_9BACT) HSP 1 Score: 176 bits (446), Expect = 9.970e-48 Identity = 107/209 (51.20%), Postives = 135/209 (64.59%), Query Frame = 1 Query: 1 VSLQTFHVDEVAEVFRDPDTYGIRVLHDEQADLALYHDFEANSGMSQLEAAEMFDEMMAGLRDALPLFAGDAFFYFMQKSHYFLHLAAGSSPDAFIDKCRRAGLGADAPVALEA-DGLGAVSAHEGLQLVPLAFSYKAVVERLGHPLAKAARPDFLTGTFQPELEAQAARTLGSLERRACVLAYAPGATEFVELSPDSARLLEALIAAG 624 VSLQTFH+DE+AE + P+ +GI+VL + DL+LYHD+ A SGM+Q EAA MF+E+MA LR PLF+GD +FMQKSHYFLHLA G++PD F C + A +AL A D L +GL V LA S+ V RLG A+A RPDFLTG + QA R LG+L + +LA+APG E VEL+PD+A LL L AG Sbjct: 508 VSLQTFHIDEIAETYHRPEAFGIQVLPAD-GDLSLYHDYTAASGMTQGEAAAMFEEIMAALRREFPLFSGDHIHFFMQKSHYFLHLARGTTPDQFAAACAQR---TRAKLALGARDDL---RVRDGLVTVELAHSWAEAVRRLGTSAARAIRPDFLTGRYVDGAREQAERELGALPQVRKLLAWAPGLFEHVELAPDAAALLGELARAG 709
BLAST of mRNA_M-pyrifera_M_contig105914.1265.1 vs. uniprot
Match: A0A2D6HBB9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HBB9_9BACT) HSP 1 Score: 66.6 bits (161), Expect = 2.810e-9 Identity = 38/98 (38.78%), Postives = 56/98 (57.14%), Query Frame = 1 Query: 1 VSLQTFHVDEVAEVFRDPDTYGI-RVLHDEQADLALYHDFEANSGMSQLEAAEMFDEMMAGLRDALPLFAGDAFFYFMQKSHYFLHLAAGSSPDAFID 291 VS + F++DE +EV++ + I V D ADL +Y+DF ANSGMS+ EA +++ E L+ P+F Y KSHYFL+L S A ++ Sbjct: 495 VSARVFYLDESSEVYKRRSEFDIAEVFPDPTADLQVYYDFRANSGMSRREARDLYLEFTRALQSHFPVFQNTNMLYHELKSHYFLYLNHFGSWGALLE 592 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105914.1265.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105914.1265.1 >prot_M-pyrifera_M_contig105914.1265.1 ID=prot_M-pyrifera_M_contig105914.1265.1|Name=mRNA_M-pyrifera_M_contig105914.1265.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=209bp VSLQTFHVDEVAEVFRDPDTYGIRVLHDEQADLALYHDFEANSGMSQLEAback to top mRNA from alignment at M-pyrifera_M_contig105914:5..631- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105914.1265.1 ID=mRNA_M-pyrifera_M_contig105914.1265.1|Name=mRNA_M-pyrifera_M_contig105914.1265.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=627bp|location=Sequence derived from alignment at M-pyrifera_M_contig105914:5..631- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105914:5..631- >mRNA_M-pyrifera_M_contig105914.1265.1 ID=mRNA_M-pyrifera_M_contig105914.1265.1|Name=mRNA_M-pyrifera_M_contig105914.1265.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1254bp|location=Sequence derived from alignment at M-pyrifera_M_contig105914:5..631- (Macrocystis pyrifera P11B4 male)back to top |