mRNA_M-pyrifera_M_contig105817.1247.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105817.1247.1 vs. uniprot
Match: A0A5A8EHS8_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EHS8_CAFRO) HSP 1 Score: 185 bits (470), Expect = 1.050e-51 Identity = 92/151 (60.93%), Postives = 111/151 (73.51%), Query Frame = 1 Query: 1 GTAVRVFETRSGRAVGSAYVHPTEVRQVRLSQHGSGLPRRRLALVDASGDLYVTPVTQHEPEKLATMCESCAWNDASDALLAAADGRSVLWMDPSSVWVDRDLCALAKVETDASDWGRLPTLISFIGPRATVQRGDGAILHTTINPFLPLL 453 G VRVFETRSGR VG YVH VRQV LSQ GL RRLA+VD++GDL+VTPV HEPEKLA+M ES AW DA+DALLA ADGR VLW PS+VWVDRDLC A+ + A +GR+P ++S+ G R V+RGDGA +H +++ PLL Sbjct: 540 GRTVRVFETRSGRPVGVPYVHTVAVRQVALSQFTPGLAERRLAIVDSAGDLWVTPVLVHEPEKLASMVESAAWCDAADALLACADGRRVLWHCPSAVWVDRDLCEAAREDVAAPAFGRIPRVLSYRGSRCVVRRGDGAAVHASVSVNTPLL 690
BLAST of mRNA_M-pyrifera_M_contig105817.1247.1 vs. uniprot
Match: UPI001E1DB922 (intraflagellar transport protein 80 homolog isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB922) HSP 1 Score: 116 bits (290), Expect = 2.870e-27 Identity = 62/154 (40.26%), Postives = 94/154 (61.04%), Query Frame = 1 Query: 10 VRVFETRSGRAVGSA--YVHPTEVRQVRLSQHGSGLPRRRLALVDASGDLYVTPV----TQHEPEKLATMCESCAWNDASDALLAAADGRSVLWMDPSSVWVDRDLCALAKVETDASDWGRLPTLISFIGPRATVQRGDGAILHTTINPFLPLL 453 V VF+ SG+ +G H EV ++ L Q G G RRLA++D + DLY+T V T + KL TM S AWNDA++ L A ADG+ +W PS+V+VDRDL E +AS++G+ P L+ F+G ++R +G+++ T+I+P+ +L Sbjct: 450 VYVFDALSGKPLGDGKPITHKLEVMEIALDQCGPGA-ERRLAIIDKNRDLYLTSVRVFGTDRKTVKLGTMIMSLAWNDATNMLAALADGKFTVWYYPSAVYVDRDLLPRTIFEKEASEFGKNPQLLQFVGNHIVIRRAEGSLVSTSISPYPAIL 602
BLAST of mRNA_M-pyrifera_M_contig105817.1247.1 vs. uniprot
Match: A0A482UM66_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UM66_9ARCH) HSP 1 Score: 110 bits (275), Expect = 2.680e-26 Identity = 53/119 (44.54%), Postives = 77/119 (64.71%), Query Frame = 1 Query: 106 GLPRRRLALVDASGDLYVTPVTQHEPEKLATMCESCAWNDASDALLAAADGRSVLWMDPSSVWVDRDLCALAKVETDASD---WGRLPTLISFIGPRATVQRGDGAILHTTINPFLPLL 453 GLP RRLA VD+S DLY+TP+ + +P KL+ M +S AWN+A+D L DG+ W+ PS+ D +LCA AKV +DA+ G P+++ GPR V + DG++LH T + + P+L Sbjct: 5 GLPERRLAFVDSSLDLYITPLLKPQPYKLSAMIDSIAWNEAADMLTCLGDGQCTTWLVPSAASTDSELCAAAKVTSDATLSTLLGPSPSILRAAGPRLCVLKADGSLLHITTSYYAPIL 123
BLAST of mRNA_M-pyrifera_M_contig105817.1247.1 vs. uniprot
Match: A0A835Y449_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y449_9CHLO) HSP 1 Score: 112 bits (280), Expect = 6.310e-26 Identity = 57/151 (37.75%), Postives = 87/151 (57.62%), Query Frame = 1 Query: 1 GTAVRVFETRSGRAVGSAYVHPTEVRQVRLSQHGSGLPRRRLALVDASGDLYVTPVTQHEPEKLATMCESCAWNDASDALLAAADGRSVLWMDPSSVWVDRDLCALAKVETDASDWGRLPTLISFIGPRATVQRGDGAILHTTINPFLPLL 453 GT VR F+T GR +G + H EV+++ LSQ G+ + R+L ++D + DLY+ PV + KLA MC+S W+DA+ L A D R +W PS V+VD+DL + SD+G+ + F G R V+R DG ++ +P+ +L Sbjct: 438 GTTVRFFDTAQGRPLGDPWSHTLEVKEIALSQAGT-INDRQLIVIDRNRDLYLLPVMKRNIAKLAAMCDSAKWHDATPMLGAMVDQRLCVWYYPSEVYVDKDLLNKTRYTKSDSDFGKSAQIQMFAGNRCLVRRSDGVLVSAATSPYPAVL 587
BLAST of mRNA_M-pyrifera_M_contig105817.1247.1 vs. uniprot
Match: UPI001EE5F7DE (intraflagellar transport protein 80 homolog n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE5F7DE) HSP 1 Score: 112 bits (279), Expect = 8.660e-26 Identity = 58/150 (38.67%), Postives = 91/150 (60.67%), Query Frame = 1 Query: 10 VRVFETRSGRAVGSA--YVHPTEVRQVRLSQHGSGLPRRRLALVDASGDLYVTPV----TQHEPEKLATMCESCAWNDASDALLAAADGRSVLWMDPSSVWVDRDLCALAKVETDASDWGRLPTLISFIGPRATVQRGDGAILHTTINPF 441 V VF+ ++G+++G H EV +V L Q G RRLA++D + DLY+T V T + KL TM +S AWND ++ L A DG ++W P++V+VDRDL DAS++G+ P LI F+G ++R +G+++ TT++P+ Sbjct: 443 VYVFDAQTGKSMGDGKPVTHKVEVMEVALDQFGPAT-ERRLAIIDKNRDLYLTSVRVFGTDRKSVKLGTMIQSLAWNDDTNMLAAMTDGCVLVWYYPNAVFVDRDLLPKTLYRKDASEFGKAPQLIDFVGNHLILRRSEGSLISTTVSPY 591
BLAST of mRNA_M-pyrifera_M_contig105817.1247.1 vs. uniprot
Match: A0A1S3HLL6_LINUN (intraflagellar transport protein 80 homolog isoform X1 n=3 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HLL6_LINUN) HSP 1 Score: 110 bits (274), Expect = 4.060e-25 Identity = 59/154 (38.31%), Postives = 91/154 (59.09%), Query Frame = 1 Query: 10 VRVFETRSGRAVGSA--YVHPTEVRQVRLSQHGSGLPRRRLALVDASGDLYVTPV----TQHEPEKLATMCESCAWNDASDALLAAADGRSVLWMDPSSVWVDRDLCALAKVETDASDWGRLPTLISFIGPRATVQRGDGAILHTTINPFLPLL 453 + +FE +G+ +G H EV ++ L Q G RRLA++D + DLY+T V T+ + KL TM S WND S+ L A ADG+ +W P+ +VDRDL E DAS++G+ P L+SF+G +++R DG+++ T I+P+ +L Sbjct: 443 IHLFEATTGKPLGDGKPITHKLEVMEIALDQCGPS-NERRLAIIDKNRDLYLTSVRTFGTERKTVKLGTMILSQVWNDNSNMLAAMADGKFTVWYYPNVAYVDRDLLPKTVCEKDASEFGKNPQLLSFLGSHVSLRRADGSLVSTGISPYPAML 595
BLAST of mRNA_M-pyrifera_M_contig105817.1247.1 vs. uniprot
Match: K1R508_CRAGI (Intraflagellar transport protein 80-like protein n=5 Tax=Crassostrea TaxID=6564 RepID=K1R508_CRAGI) HSP 1 Score: 109 bits (272), Expect = 7.470e-25 Identity = 54/154 (35.06%), Postives = 95/154 (61.69%), Query Frame = 1 Query: 10 VRVFETRSGRAVGSA--YVHPTEVRQVRLSQHGSGLPRRRLALVDASGDLYVTPV----TQHEPEKLATMCESCAWNDASDALLAAADGRSVLWMDPSSVWVDRDLCALAKVETDASDWGRLPTLISFIGPRATVQRGDGAILHTTINPFLPLL 453 + VF+ ++G+ +G H EV ++ L Q G RRLA++D + DLY+T V ++ + KL M +S WND+++ L A ADG+ +W P++++VDRDL + E +AS++G+ P L++FIG ++R +G+++ T I+P+ +L Sbjct: 381 IYVFDAQNGKPLGDGKPITHKLEVMEIALDQCGPAT-ERRLAIIDKNRDLYLTSVRVFGSERKSNKLGNMIQSLCWNDSANMLAALADGKFTVWYYPNTIYVDRDLASRTVFEKEASEFGKNPQLLNFIGNHIIIRRAEGSLVGTGISPYPAIL 533
BLAST of mRNA_M-pyrifera_M_contig105817.1247.1 vs. uniprot
Match: A0A1V9YGR8_9STRA (Intraflagellar Transport protein 80 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGR8_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.030e-24 Identity = 56/148 (37.84%), Postives = 88/148 (59.46%), Query Frame = 1 Query: 10 VRVFETRSGRAVGSAYVHPTEVRQVRLSQHGSGLPRRRLALVDASGDLYVTPVTQHEPEKLATMCESCAWNDASDALLAAADGRSVLWMDPSSVWVDRDLCALAKVETDASDWGRLPTLISFIGPRATVQRGDGAILHTTINPFLPLL 453 VR F+ SG+A+ A+ H EV ++ LS +G+ R+L +D + DL++ VT KL ++ AWNDAS+ L+A +D + W+ P+ V+VDR L A D D+ ++ + SF+GPR TV+R DGAIL ++P+ +L Sbjct: 446 VRCFDINSGKALPVAFTHSLEVAELALSHYGT-FADRKLFFIDTNRDLHLARVTHKGTFKLQAQVDTAAWNDASEMLVAISDAKVFCWLYPNMVYVDRTLLPEAIETKDGVDYMKMAQITSFVGPRFTVRRADGAILAGGVSPYSTVL 592
BLAST of mRNA_M-pyrifera_M_contig105817.1247.1 vs. uniprot
Match: UPI001CFAA37E (intraflagellar transport protein 80 homolog isoform X1 n=3 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFAA37E) HSP 1 Score: 108 bits (269), Expect = 1.910e-24 Identity = 52/152 (34.21%), Postives = 93/152 (61.18%), Query Frame = 1 Query: 16 VFETRSGRAVGSA--YVHPTEVRQVRLSQHGSGLPRRRLALVDASGDLYVTPVTQHEPE----KLATMCESCAWNDASDALLAAADGRSVLWMDPSSVWVDRDLCALAKVETDASDWGRLPTLISFIGPRATVQRGDGAILHTTINPFLPLL 453 +F+T SG+ +G + H E+ + L+Q G R++A +D + DLY+T V + E K+ TM + AWNDA++ L D ++W PS+V+VD+DL + E DAS++G+ P +++F+G + T++R DG++++T +P+ +L Sbjct: 442 MFDTASGKLLGDGKPFAHKIEILETALNQSGPA-QERKMAFLDKNHDLYITAVQRLGKEQKVFKIGTMVHTMAWNDATNILCGLHDNSFIVWYYPSTVYVDKDLLSKTIFEKDASEFGKTPQIVNFVGSQVTIRRTDGSLVYTNTSPYPAIL 592
BLAST of mRNA_M-pyrifera_M_contig105817.1247.1 vs. uniprot
Match: A0A4W3JLD7_CALMI (Uncharacterized protein n=5 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3JLD7_CALMI) HSP 1 Score: 103 bits (257), Expect = 7.880e-23 Identity = 49/152 (32.24%), Postives = 95/152 (62.50%), Query Frame = 1 Query: 16 VFETRSGRAVGSA--YVHPTEVRQVRLSQHGSGLPRRRLALVDASGDLYVTPVTQHEPE----KLATMCESCAWNDASDALLAAADGRSVLWMDPSSVWVDRDLCALAKVETDASDWGRLPTLISFIGPRATVQRGDGAILHTTINPFLPLL 453 + + SG+++G +H EV ++ L Q GS R++A++D + DLY++ V + E K++TM S AWND + L + V+W P++V+VD++L + E DAS++G+ P +++++G + T++R DG++++T+I+P+ +L Sbjct: 441 LIDALSGKSLGDGKPLIHKIEVMEIALDQFGSP-NERKIAIIDKNRDLYISSVRRFGKEQRIIKMSTMVHSMAWNDTINVLCGLQNMHFVVWYYPNTVYVDKELLSKTVYEKDASEFGKSPQIVNYVGNQVTIRRADGSLIYTSISPYPAIL 591 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105817.1247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105817.1247.1 >prot_M-pyrifera_M_contig105817.1247.1 ID=prot_M-pyrifera_M_contig105817.1247.1|Name=mRNA_M-pyrifera_M_contig105817.1247.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp GTAVRVFETRSGRAVGSAYVHPTEVRQVRLSQHGSGLPRRRLALVDASGDback to top mRNA from alignment at M-pyrifera_M_contig105817:180..632+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105817.1247.1 ID=mRNA_M-pyrifera_M_contig105817.1247.1|Name=mRNA_M-pyrifera_M_contig105817.1247.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=453bp|location=Sequence derived from alignment at M-pyrifera_M_contig105817:180..632+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105817:180..632+ >mRNA_M-pyrifera_M_contig105817.1247.1 ID=mRNA_M-pyrifera_M_contig105817.1247.1|Name=mRNA_M-pyrifera_M_contig105817.1247.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=906bp|location=Sequence derived from alignment at M-pyrifera_M_contig105817:180..632+ (Macrocystis pyrifera P11B4 male)back to top |