mRNA_M-pyrifera_M_contig105798.1240.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig105798.1240.1
Unique NamemRNA_M-pyrifera_M_contig105798.1240.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig105798.1240.1 vs. uniprot
Match: A0A2G8Y3F8_TOXGO (B3GNTL1 protein (Fragment) n=1 Tax=Toxoplasma gondii COUG TaxID=1074873 RepID=A0A2G8Y3F8_TOXGO)

HSP 1 Score: 80.1 bits (196), Expect = 6.380e-16
Identity = 38/78 (48.72%), Postives = 48/78 (61.54%), Query Frame = 1
Query:    4 LPGRISTQVDALLSHPFALIGATFSRDPPDATPRYAKWANSLSTASDFALHEFREVPLVQPTWCMHRHLWDAVGGYVE 237
            LP RI  Q+      P  ++G +F RDPPD+TPRY +W NSLS  S      FRE  L+ PTW MHR ++  VGG+VE
Sbjct:   98 LPERIDAQLREARRRPDTIVGCSFVRDPPDSTPRYTQWLNSLSQ-SQLVTSRFRECTLLMPTWFMHRDVFLRVGGFVE 174          
BLAST of mRNA_M-pyrifera_M_contig105798.1240.1 vs. uniprot
Match: V5BEK6_TOXGV (B3GNTL1 protein n=14 Tax=Toxoplasma gondii TaxID=5811 RepID=V5BEK6_TOXGV)

HSP 1 Score: 80.1 bits (196), Expect = 9.020e-16
Identity = 38/78 (48.72%), Postives = 48/78 (61.54%), Query Frame = 1
Query:    4 LPGRISTQVDALLSHPFALIGATFSRDPPDATPRYAKWANSLSTASDFALHEFREVPLVQPTWCMHRHLWDAVGGYVE 237
            LP RI  Q+      P  ++G +F RDPPD+TPRY +W NSLS  S      FRE  L+ PTW MHR ++  VGG+VE
Sbjct:  433 LPERIDAQLREARRRPDTIVGCSFVRDPPDSTPRYTQWLNSLSQ-SQLVTSRFRECTLLMPTWFMHRDVFLRVGGFVE 509          
BLAST of mRNA_M-pyrifera_M_contig105798.1240.1 vs. uniprot
Match: A0A8J2SGG9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGG9_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 4.810e-13
Identity = 39/78 (50.00%), Postives = 47/78 (60.26%), Query Frame = 1
Query:    7 PGRISTQVDALLSHPFA---LIGATFSRDPPDATPRYAKWANSLSTASDFALHEFREVPLVQPTWCMHRHLWDAVGGY 231
            P R++    A  + P A   L G+ FSR PP+AT RYA WANSLS+   F L  FRE  L+QPTW  HR LW + G Y
Sbjct:  111 PRRVAALRRAAETQPDAKNTLFGSRFSRHPPNATARYAAWANSLSSERLF-LERFRECTLIQPTWFFHRALWRSAGRY 187          
BLAST of mRNA_M-pyrifera_M_contig105798.1240.1 vs. uniprot
Match: A0A2A9M8G3_9APIC (B3GNTL1 protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9M8G3_9APIC)

HSP 1 Score: 70.1 bits (170), Expect = 2.990e-12
Identity = 32/77 (41.56%), Postives = 46/77 (59.74%), Query Frame = 1
Query:    7 PGRISTQVDALLSHPFALIGATFSRDPPDATPRYAKWANSLSTASDFALHEFREVPLVQPTWCMHRHLWDAVGGYVE 237
            P RI+ Q+ A    P  ++G+ F RDPP++TPRY  W N+LS         FRE  L+ PTW M R +++  GG++E
Sbjct:  398 PERIAKQLQAAKMRPNTIVGSGFVRDPPESTPRYTHWLNTLSE-KQLLTSRFRECTLLMPTWFMPREVFERRGGFLE 473          
BLAST of mRNA_M-pyrifera_M_contig105798.1240.1 vs. uniprot
Match: UPI0018A73C07 (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like protein 1 n=2 Tax=Penaeus TaxID=133894 RepID=UPI0018A73C07)

HSP 1 Score: 68.9 bits (167), Expect = 6.780e-12
Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 1
Query:    1 MLPGRISTQVDALLSHPFALIGATFSRDPPDATPRYAKWANSLSTAS-DFALHEFREVPLVQPTWCMHRHLWDAVGGYVE 237
            M P RI  Q +    +  A+IG+ F+RDPPD+T RY+KWAN L  +     ++      ++ PTW  HR+++D VGG+ E
Sbjct:  139 MKPTRIQKQYELAFHNHEAIIGSKFTRDPPDSTLRYSKWANELDESKLTLQIYTSHGPTVIMPTWFCHRNVFDRVGGFSE 218          
BLAST of mRNA_M-pyrifera_M_contig105798.1240.1 vs. uniprot
Match: A0A151ZAJ5_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZAJ5_9MYCE)

HSP 1 Score: 67.8 bits (164), Expect = 1.910e-11
Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 1
Query:   13 RISTQ-VDALLSHPFALIGATFSRDPPDATPRYAKWANSLSTASDFALHEFREVPLVQPTWCMHRHLWDAVGGYVE 237
            R+  Q ++AL      LIG+ F R P  ++ RY++W NSL T      H+FRE+P++QPTW M R L++ +GGY E
Sbjct:  212 RVEMQYLEALEKGKNVLIGSNFIRIPEGSSHRYSQWCNSL-TNQQLLWHQFREIPIIQPTWFMSRSLYNRIGGYQE 286          
BLAST of mRNA_M-pyrifera_M_contig105798.1240.1 vs. uniprot
Match: UPI001C70CD43 (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like protein 1 isoform X1 n=2 Tax=Penaeus japonicus TaxID=27405 RepID=UPI001C70CD43)

HSP 1 Score: 65.9 bits (159), Expect = 8.370e-11
Identity = 33/81 (40.74%), Postives = 47/81 (58.02%), Query Frame = 1
Query:    1 MLPGRISTQVD-ALLSHPFALIGATFSRDPPDATPRYAKWANSLSTAS-DFALHEFREVPLVQPTWCMHRHLWDAVGGYVE 237
            M P RI  Q + A  +H   +IG+ F+RDPPD+T RY KWAN L  +     ++      ++ PTW  HR ++D VGG+ E
Sbjct:  130 MKPTRIQKQYEMAFHNHEAQIIGSRFTRDPPDSTLRYTKWANELDESKLTLQVYTSHGPTVIMPTWFCHRAVFDRVGGFSE 210          
BLAST of mRNA_M-pyrifera_M_contig105798.1240.1 vs. uniprot
Match: A0A8J4PRN9_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PRN9_9MYCE)

HSP 1 Score: 65.9 bits (159), Expect = 9.150e-11
Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 1
Query:    1 MLPGRISTQVDALLSHPFALIGATFSRDPPDATPRYAKWANSLSTASDFALHEFREVPLVQPTWCMHRHLWDAVGGYVE 237
            M   R+  Q    +     L+G+ F R P  ++ RY  W N ++    F LH++REV ++QPTW MHR ++D  GGYVE
Sbjct:  248 MYRDRVEMQYRECVKDHNGLVGSNFVRVPLGSSARYTDWCNRMTEQQVF-LHQYREVSVIQPTWFMHRSVFDRQGGYVE 325          
BLAST of mRNA_M-pyrifera_M_contig105798.1240.1 vs. uniprot
Match: UPI000F66C1E5 (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like protein 1 isoform X1 n=2 Tax=Penaeus vannamei TaxID=6689 RepID=UPI000F66C1E5)

HSP 1 Score: 64.7 bits (156), Expect = 2.220e-10
Identity = 30/80 (37.50%), Postives = 47/80 (58.75%), Query Frame = 1
Query:    1 MLPGRISTQVDALLSHPFALIGATFSRDPPDATPRYAKWANSLSTAS-DFALHEFREVPLVQPTWCMHRHLWDAVGGYVE 237
            M P RI  Q +    +  A+IG+ F+RDPPD+T R+ KWAN L  +     ++      ++ PTW  HR++++ VGG+ E
Sbjct:  139 MKPTRIQKQYEMAFHNHEAIIGSRFTRDPPDSTLRFTKWANELDESKLTIQVYTSHGPTVIMPTWFCHRNVFNRVGGFSE 218          
BLAST of mRNA_M-pyrifera_M_contig105798.1240.1 vs. uniprot
Match: A0A7R9BD04_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BD04_9CRUS)

HSP 1 Score: 61.2 bits (147), Expect = 3.560e-9
Identity = 32/81 (39.51%), Postives = 46/81 (56.79%), Query Frame = 1
Query:    1 MLPGRISTQVDALLSHPFALIGATFSRDPPDATPRYAKWANSLSTASDFALHEFRE--VPLVQPTWCMHRHLWDAVGGYVE 237
            M P RI  Q+ A   HP A+IG+  +R+PPD+T R+ +WAN+L      A   F      L+ PTW   R +++ VGG+ E
Sbjct:   99 MRPERIDIQLRAAKLHPNAIIGSRVTRNPPDSTQRFTRWANNLDRVK-LATQIFTSHGPTLLMPTWFCDRRVFERVGGFEE 178          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105798.1240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A2G8Y3F8_TOXGO6.380e-1648.72B3GNTL1 protein (Fragment) n=1 Tax=Toxoplasma gond... [more]
V5BEK6_TOXGV9.020e-1648.72B3GNTL1 protein n=14 Tax=Toxoplasma gondii TaxID=5... [more]
A0A8J2SGG9_9STRA4.810e-1350.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A2A9M8G3_9APIC2.990e-1241.56B3GNTL1 protein n=1 Tax=Besnoitia besnoiti TaxID=9... [more]
UPI0018A73C076.780e-1240.00UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltr... [more]
A0A151ZAJ5_9MYCE1.910e-1143.42Uncharacterized protein n=1 Tax=Tieghemostelium la... [more]
UPI001C70CD438.370e-1140.74UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltr... [more]
A0A8J4PRN9_9MYCE9.150e-1139.24Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
UPI000F66C1E52.220e-1037.50UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltr... [more]
A0A7R9BD04_9CRUS3.560e-939.51Hypothetical protein n=1 Tax=Notodromas monacha Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105798contigM-pyrifera_M_contig105798:391..627 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeApicomplexa
Seed ortholog score83.6
Seed ortholog evalue4.6e-14
Seed eggNOG ortholog99158.XP_008889031.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Glycosyl transferase, group 2 family domain-containing protein
EggNOG OGs3YH26@5794,3YNIE@5796,3YUPZ@5809,COG0463@1,KOG2977@2759
COG Functional cat.M
Best tax levelSarcocystidae
Best eggNOG OGNA|NA|NA
Exons1
Model size237
Cds size237
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815566.81851-CDS-M-pyrifera_M_contig105798:390..6271622815566.81851-CDS-M-pyrifera_M_contig105798:390..627Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105798 391..627 -
1692277466.870827-CDS-M-pyrifera_M_contig105798:390..6271692277466.870827-CDS-M-pyrifera_M_contig105798:390..627Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105798 391..627 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105798.1240.1prot_M-pyrifera_M_contig105798.1240.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig105798 391..627 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig105798.1240.1

>prot_M-pyrifera_M_contig105798.1240.1 ID=prot_M-pyrifera_M_contig105798.1240.1|Name=mRNA_M-pyrifera_M_contig105798.1240.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=79bp
MLPGRISTQVDALLSHPFALIGATFSRDPPDATPRYAKWANSLSTASDFA
LHEFREVPLVQPTWCMHRHLWDAVGGYVE
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mRNA from alignment at M-pyrifera_M_contig105798:391..627-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig105798.1240.1 ID=mRNA_M-pyrifera_M_contig105798.1240.1|Name=mRNA_M-pyrifera_M_contig105798.1240.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=237bp|location=Sequence derived from alignment at M-pyrifera_M_contig105798:391..627- (Macrocystis pyrifera P11B4 male)
ATGCTTCCTGGTCGTATTTCTACGCAAGTTGACGCCCTTCTATCCCACCC GTTTGCTCTCATAGGTGCAACCTTCTCCCGTGACCCTCCAGATGCCACTC CACGGTATGCGAAATGGGCAAATTCCCTCTCCACTGCATCCGACTTTGCT CTGCATGAGTTTCGAGAAGTTCCTCTTGTGCAACCAACTTGGTGCATGCA TCGTCACCTGTGGGATGCTGTTGGAGGGTACGTGGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig105798:391..627-

>mRNA_M-pyrifera_M_contig105798.1240.1 ID=mRNA_M-pyrifera_M_contig105798.1240.1|Name=mRNA_M-pyrifera_M_contig105798.1240.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=474bp|location=Sequence derived from alignment at M-pyrifera_M_contig105798:391..627- (Macrocystis pyrifera P11B4 male)
ATGCTTCCTGGTCGTATTTCTACGCAAGTTGACGCCCTTCTATCCCACCC
GTTTGCTCTCATAGGTGCAACCTTCTCCCGTGACCCTCCAGATGCCACTC
CACGGTATGCGAAATGGGCAAATTCCCTCTCCACTGCATCCGACTTTGCT
CTGCATGAGTTTCGAGAAGTTCCTCTTGTGCAACCAACTTGGTGCATGCA
TCGTCACCTGTGGGATGCTGTTGGAGGGTACGTGGAGATGCTTCCTGGTC
GTATTTCTACGCAAGTTGACGCCCTTCTATCCCACCCGTTTGCTCTCATA
GGTGCAACCTTCTCCCGTGACCCTCCAGATGCCACTCCACGGTATGCGAA
ATGGGCAAATTCCCTCTCCACTGCATCCGACTTTGCTCTGCATGAGTTTC
GAGAAGTTCCTCTTGTGCAACCAACTTGGTGCATGCATCGTCACCTGTGG
GATGCTGTTGGAGGGTACGTGGAG
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