mRNA_M-pyrifera_M_contig10577.1236.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10577.1236.1
Unique NamemRNA_M-pyrifera_M_contig10577.1236.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig10577.1236.1 vs. uniprot
Match: D8LTE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTE4_ECTSI)

HSP 1 Score: 329 bits (843), Expect = 1.710e-108
Identity = 163/190 (85.79%), Postives = 179/190 (94.21%), Query Frame = 3 
Query:  246 CSRLASEANRLMGGIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPLLLVQAVSQTMRSEGRPGSIVNISSVAAHGGIPKISTYAVSKAALNALTKIHAYELREARIIRVNAINVGWTLTDNEDAIQRVEMDNINWIEEADKGHAMGRLLRPVDVAATVGHLLSDSSAMMTGTIIDLHPEMVNNCWG 815
            CSRL SEA+RLMG IDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGP LLVQAVS++MRS+GRPGSIVNISSV AHGGIPK+STY+VSKAALNA TK+HAYEL+ +RI RVNAINVGWTLTDNE  +QRVEM + NWIE+ADKGHAMGRLLRPVD+AATVGHLLSD+SAMMTGTI+DLHPEMV+NCWG
Sbjct:  101 CSRLVSEADRLMGCIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPFLLVQAVSKSMRSKGRPGSIVNISSVVAHGGIPKVSTYSVSKAALNACTKMHAYELKRSRI-RVNAINVGWTLTDNEHVLQRVEMGSENWIEDADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVDNCWG 289
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BLAST of mRNA_M-pyrifera_M_contig10577.1236.1 vs. uniprot
Match: A0A6H5KWZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWZ8_9PHAE)

HSP 1 Score: 309 bits (792), Expect = 1.970e-102
Identity = 153/179 (85.47%), Postives = 168/179 (93.85%), Query Frame = 3 
Query:  279 MGGIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPLLLVQAVSQTMRSEGRPGSIVNISSVAAHGGIPKISTYAVSKAALNALTKIHAYELREARIIRVNAINVGWTLTDNEDAIQRVEMDNINWIEEADKGHAMGRLLRPVDVAATVGHLLSDSSAMMTGTIIDLHPEMVNNCWG 815
            MG IDGLVNCAAWTARATLDTTTV+VWDRMMNTNVRGP LLVQAVS++MRS+G PGSIVNISSV AHGGIPK+STY+VSKAALNA TK+HAYEL+ ARI RVNAINVGWTLTDNE  +QRVEM + NWIE+ADKGHAMGRLLRPVD+AATVGHLLSD+SAMMTGTI+DLHPEMV+NCWG
Sbjct:    1 MGCIDGLVNCAAWTARATLDTTTVEVWDRMMNTNVRGPFLLVQAVSKSMRSKGHPGSIVNISSVVAHGGIPKVSTYSVSKAALNACTKMHAYELKGARI-RVNAINVGWTLTDNEHVLQRVEMGSENWIEDADKGHAMGRLLRPVDIAATVGHLLSDASAMMTGTIVDLHPEMVDNCWG 178
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BLAST of mRNA_M-pyrifera_M_contig10577.1236.1 vs. uniprot
Match: R1CSP3_EMIHU (Short chain dehydrogenase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CSP3_EMIHU)

HSP 1 Score: 173 bits (438), Expect = 9.330e-48
Identity = 94/172 (54.65%), Postives = 119/172 (69.19%), Query Frame = 3 
Query:  279 MGGIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPLLLVQAVSQTMRSEGRPGSIVNISSVAAHGGIPKISTYAVSKAALNALTKIHAYELREARIIRVNAINVGWTLTDNEDAIQRVEMDNINWIEEADKGHAMGRLLRPVDVAATVGHLLSDSSAMMTGTIIDLHPE 794
            MG IDG+VN AA TAR  L +TT + WD MM  N R P L+ QA ++ M  +G  GSIVNISSVA  GG P +  Y+VSKAA +ALT+ +A EL    I RVN + +GW  TDNEDA+QR  +   +W+++AD    +GR+LRP DVAATV  LLSD+S MMTG ++DLHPE
Sbjct:   98 MGAIDGVVNAAATTARGNLASTTAEDWDAMMACNARAPFLITQAATRHMIEKGIRGSIVNISSVAGKGGAPFLMAYSVSKAAASALTRNNAAELAPHGI-RVNCVEMGWCATDNEDALQR-SVKGDDWLQQADASQPLGRILRPADVAATVCFLLSDASLMMTGNVVDLHPE 267
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BLAST of mRNA_M-pyrifera_M_contig10577.1236.1 vs. uniprot
Match: A0A6V1MI94_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MI94_HETAK)

HSP 1 Score: 174 bits (440), Expect = 1.540e-47
Identity = 92/188 (48.94%), Postives = 126/188 (67.02%), Query Frame = 3 
Query:  246 CSRLASEANRLMGGIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPLLLVQAVSQTMRSEGRP--GSIVNISSVAAHGGIPKISTYAVSKAALNALTKIHAYELREARIIRVNAINVGWTLTDNEDAIQRVEMDNINWIEEADKGHAMGRLLRPVDVAATVGHLLSDSSAMMTGTIIDLHPEMVN 803
            C+ L   A    G + GLVN A  T R TL++T    +D ++ TN++GP  L +  ++ MR       GS+VNISS+A+H G P IS Y+V+KAALNA+TK+HA EL+  R+ RVNA+ +GWTLTDNE  IQ VE    +W+E+ D  H  GR+LRPVDVAA  G LLSD++ M++G ++D HP+ VN
Sbjct:  135 CAALVRRALGRFGALHGLVNAAGLTTRGTLESTDEATFDALLATNLKGPFFLTKHAARAMRDTAGASGGSVVNISSIASHAGAPFISCYSVTKAALNAMTKVHALELQRDRV-RVNALAIGWTLTDNEHKIQLVERGP-DWLEKGDAAHPFGRILRPVDVAAAAGFLLSDAALMISGAVLDQHPDFVN 320
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BLAST of mRNA_M-pyrifera_M_contig10577.1236.1 vs. uniprot
Match: I0I718_CALAS (Putative oxidoreductase n=2 Tax=Caldilinea aerophila TaxID=133453 RepID=I0I718_CALAS)

HSP 1 Score: 165 bits (418), Expect = 4.180e-45
Identity = 90/185 (48.65%), Postives = 114/185 (61.62%), Query Frame = 3 
Query:  246 CSRLASEANRLMGGIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPLLLVQAVSQTMRSEGRPGSIVNISSVAAHGGIPKISTYAVSKAALNALTKIHAYELREARIIRVNAINVGWTLTDNEDAIQRVEMDNINWIEEADKGHAMGRLLRPVDVAATVGHLLSDSSAMMTGTIIDLHPEMV 800
            C  +   A+   G IDGLVNCAA T R ++D  T ++WDR+M  N+R P  L+Q  ++ MR EGR GSIVNI S+ AHGG+P ++ Y+ SK  L  LTK  A  L   RI RVN INVGW  T NED +QR E    NW+E AD     GR+LRP DV+  V  LLS   AMM+G +ID   + +
Sbjct:   71 CRTVIRAADERFGRIDGLVNCAASTERGSVDDATPELWDRIMAINLRAPFFLMQEAARVMRREGRGGSIVNIGSINAHGGLPNLTVYSTSKGGLMTLTKNAAVVLGADRI-RVNCINVGWMFTPNEDIVQRAEGRGDNWLEVADAQMPFGRILRPPDVSGLVMWLLSAEGAMMSGAVIDFDHQRI 254
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BLAST of mRNA_M-pyrifera_M_contig10577.1236.1 vs. uniprot
Match: A0A7S2HYS1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYS1_9STRA)

HSP 1 Score: 163 bits (412), Expect = 6.360e-44
Identity = 96/180 (53.33%), Postives = 125/180 (69.44%), Query Frame = 3 
Query:  258 ASEANRLMGGIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPLLLVQAVSQTM-RSEGRPGSIVNISSVAAHGGIPKISTYAVSKAALNALTKIHAYELREARIIRVNAINVGWTLTDNEDAIQRVEMDNINWIEEADKGHAMGRLLRPVDVAATVGHLLSDSSAMMTGTIIDLHPE 794
            A+EA   +G I GLVN AA T R  L TTT + +D  M  NVR P L+ Q V++ M  +  + GSIVNI SVAA GG P I  Y+ +KAAL+++TK +A EL   + IRVN +N+GW LT+NED +QR    + +W E+AD G  +GR+LRP DVAATVG LLSD+SAMMTG+++ LHPE
Sbjct:   91 AAEAMSGVGPISGLVNAAATTGRGNLLTTTAEDFDMQMALNVRAPFLVSQGVAKHMIENNVKGGSIVNICSVAALGGAPFIMAYSAAKAALSSMTKNNAAELAP-KGIRVNGVNMGWCLTENEDKLQRQNSGD-DWAEKADAGVPIGRILRPEDVAATVGFLLSDASAMMTGSVVGLHPE 268
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BLAST of mRNA_M-pyrifera_M_contig10577.1236.1 vs. uniprot
Match: B7G702_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G702_PHATC)

HSP 1 Score: 164 bits (414), Expect = 8.470e-44
Identity = 96/175 (54.86%), Postives = 119/175 (68.00%), Query Frame = 3 
Query:  288 IDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPLLLVQAVS------QTMRSEGRPGSIVNISSVAAHGGIPKISTYAVSKAALNALTKIHAYELREARIIRVNAINVGWTLTDNEDAIQRVEMDNINWIEEADKGHAMGRLLRPVDVAATVGHLLSDSSAMMTGTIIDLHPE 794
            + GLVN AA T R  L TTT + +D     NVR P LL QA++      QT R+     SIVNISSVAA+GG P I+ Y+ SKAAL+ LTK +A EL    I RVNAI +GWT TDNEDA+Q  + D  +WI+ AD+G  +GR+LRP DVA TV  LLS++SAM TGT++DLHPE
Sbjct:  135 VSGLVNAAAITTRGNLFTTTSNEFDTQFFVNVRAPFLLTQALAVHCRKQQTQRTSQVRASIVNISSVAAYGGAPFITAYSASKAALSTLTKTNAAELAPHGI-RVNAIQLGWTYTDNEDALQTAQSDR-DWIQRADEGVPLGRILRPHDVAVTVVFLLSEASAMTTGTLVDLHPE 307
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BLAST of mRNA_M-pyrifera_M_contig10577.1236.1 vs. uniprot
Match: A0A7S3U3B9_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U3B9_9SPIT)

HSP 1 Score: 160 bits (405), Expect = 1.610e-43
Identity = 91/181 (50.28%), Postives = 116/181 (64.09%), Query Frame = 3 
Query:  246 CSRLASEANRLMGGIDGLVNCAAWT-ARATLDTTTVDVWDRMMNTNVRGPLLLVQAVSQTMRSEGRPGSIVNISSVAAHGGIPKISTYAVSKAALNALTKIHAYELREARIIRVNAINVGWTLTDNEDAIQRVEMDNINWIEEADKGHAMGRLLRPVDVAATVGHLLSDSSAMMTGTIIDL 785
            C  +   A +  G +DGLVNCAA    R  L+TTT++ W+ MM  N+ GP LL +  +  M+  G  GSIVNI S  AHGG P +  Y+VSK AL  LTK +A ELR A I RVN IN+GW  TD E+A Q  E     W+ EAD    MGR+LRP+D AA+V HLLSD+SAM+TG ++D+
Sbjct:   53 CQAMIDMAVQRFGRLDGLVNCAAICFPRGNLETTTLEHWENMMRINLTGPFLLTKHAAAAMKKAGNGGSIVNIGSNCAHGGAPFVMAYSVSKGALQVLTKNNAAELRSAGI-RVNQINMGWCFTDAENAGQVAEKGE-GWLAEADASSDMGRILRPIDTAASVIHLLSDASAMVTGAVLDI 231
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BLAST of mRNA_M-pyrifera_M_contig10577.1236.1 vs. uniprot
Match: UPI001676F747 (SDR family oxidoreductase n=1 Tax=Thalassobaculum fulvum TaxID=1633335 RepID=UPI001676F747)

HSP 1 Score: 160 bits (406), Expect = 2.820e-43
Identity = 89/185 (48.11%), Postives = 116/185 (62.70%), Query Frame = 3 
Query:  246 CSRLASEANRLMGGIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPLLLVQAVSQTMRSEGRPGSIVNISSVAAHGGIPKISTYAVSKAALNALTKIHAYELREARIIRVNAINVGWTLTDNEDAIQRVEMDNINWIEEADKGHAMGRLLRPVDVAATVGHLLSDSSAMMTGTIIDLHPEMV 800
            C  + + A+R  G +DGLVN A  T R T+D TT ++WDR+   N R P  L Q   + MR EG PG IVNI ++++HGG PK+  Y+ SKAAL ALT+  A+ LR  RI RVNAIN+GW  T NEDA+QR E    +W+  A+     GRL++P DVA     LLS  S +MTG +ID H + V
Sbjct:   77 CRSIVAAADRAFGRLDGLVNAAGVTDRGTVDDTTPELWDRIFAVNTRAPFFLAQEAVRIMRREGTPGRIVNIVTMSSHGGQPKLVPYSASKAALAALTRNLAHGLRRDRI-RVNAINIGWADTPNEDAVQRAEGQPADWLVRAEAAQPFGRLIKPDDVAKLTLFLLSADSGVMTGAVID-HDQNV 259
[Close]
BLAST of mRNA_M-pyrifera_M_contig10577.1236.1 vs. uniprot
Match: A0A6V2PCJ6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PCJ6_9STRA)

HSP 1 Score: 160 bits (406), Expect = 4.850e-43
Identity = 97/180 (53.89%), Postives = 123/180 (68.33%), Query Frame = 3 
Query:  258 ASEANRLMGGIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPLLLVQAVSQTM-RSEGRPGSIVNISSVAAHGGIPKISTYAVSKAALNALTKIHAYELREARIIRVNAINVGWTLTDNEDAIQRVEMDNINWIEEADKGHAMGRLLRPVDVAATVGHLLSDSSAMMTGTIIDLHPE 794
            A+EA   +G I GLVN AA T R  L TTT + +D  M  NVR P L+ Q  ++ M  ++ R GSIVNI SVAA GG P I  Y+ SKAAL A+TK +A EL   + IRVN +N+GW LT+NED +QR    + +W  +AD G  +GR+LRP DVAATVG LLSD+SAMMTG+++ LHPE
Sbjct:   91 AAEAMSGVGPISGLVNAAATTGRGNLLTTTAEDFDIQMALNVRAPFLVSQGAAKHMIENKVRGGSIVNICSVAALGGAPFIMAYSASKAALAAMTKNNAAELAP-KGIRVNGVNMGWCLTENEDKLQRKNSGD-DWAVKADAGVPIGRILRPEDVAATVGFLLSDASAMMTGSVLSLHPE 268
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10577.1236.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTE4_ECTSI1.710e-10885.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWZ8_9PHAE1.970e-10285.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
R1CSP3_EMIHU9.330e-4854.65Short chain dehydrogenase n=1 Tax=Emiliania huxley... [more]
A0A6V1MI94_HETAK1.540e-4748.94Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
I0I718_CALAS4.180e-4548.65Putative oxidoreductase n=2 Tax=Caldilinea aerophi... [more]
A0A7S2HYS1_9STRA6.360e-4453.33Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B7G702_PHATC8.470e-4454.86Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3U3B9_9SPIT1.610e-4350.28Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
UPI001676F7472.820e-4348.11SDR family oxidoreductase n=1 Tax=Thalassobaculum ... [more]
A0A6V2PCJ6_9STRA4.850e-4353.89Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10577contigM-pyrifera_M_contig10577:5197..9380 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score315.5
Seed ortholog evalue1.6e-83
Seed eggNOG ortholog2880.D8LTE4
Preferred nameTR-1
KEGG rclassRC00144
KEGG koko:K08081
KEGG ReactionR02832
KEGG Pathwayko00960,ko01100,ko01110,map00960,map01100,map01110
Hectar predicted targeting categoryother localisation
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG0725@2759
EC1.1.1.206
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons9
Model size1170
Cds size540
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815566.5114484-UTR-M-pyrifera_M_contig10577:5196..55481622815566.5114484-UTR-M-pyrifera_M_contig10577:5196..5548Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10577 5197..5548 -
1692277466.6849973-UTR-M-pyrifera_M_contig10577:5196..55481692277466.6849973-UTR-M-pyrifera_M_contig10577:5196..5548Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10577 5197..5548 -
1622815566.5948503-UTR-M-pyrifera_M_contig10577:8314..83851622815566.5948503-UTR-M-pyrifera_M_contig10577:8314..8385Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10577 8315..8385 -
1692277466.7896202-UTR-M-pyrifera_M_contig10577:8314..83851692277466.7896202-UTR-M-pyrifera_M_contig10577:8314..8385Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10577 8315..8385 -
1622815566.6036086-UTR-M-pyrifera_M_contig10577:8571..87161622815566.6036086-UTR-M-pyrifera_M_contig10577:8571..8716Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10577 8572..8716 -
1692277466.799168-UTR-M-pyrifera_M_contig10577:8571..87161692277466.799168-UTR-M-pyrifera_M_contig10577:8571..8716Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10577 8572..8716 -
1622815566.6124072-UTR-M-pyrifera_M_contig10577:9318..93801622815566.6124072-UTR-M-pyrifera_M_contig10577:9318..9380Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10577 9319..9380 -
1692277466.8078985-UTR-M-pyrifera_M_contig10577:9318..93801692277466.8078985-UTR-M-pyrifera_M_contig10577:9318..9380Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10577 9319..9380 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815566.5255775-CDS-M-pyrifera_M_contig10577:5548..55691622815566.5255775-CDS-M-pyrifera_M_contig10577:5548..5569Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10577 5549..5569 -
1692277466.6995609-CDS-M-pyrifera_M_contig10577:5548..55691692277466.6995609-CDS-M-pyrifera_M_contig10577:5548..5569Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10577 5549..5569 -
1622815566.5361843-CDS-M-pyrifera_M_contig10577:6166..62831622815566.5361843-CDS-M-pyrifera_M_contig10577:6166..6283Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10577 6167..6283 -
1692277466.7115347-CDS-M-pyrifera_M_contig10577:6166..62831692277466.7115347-CDS-M-pyrifera_M_contig10577:6166..6283Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10577 6167..6283 -
1622815566.5461698-CDS-M-pyrifera_M_contig10577:6712..68151622815566.5461698-CDS-M-pyrifera_M_contig10577:6712..6815Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10577 6713..6815 -
1692277466.7247632-CDS-M-pyrifera_M_contig10577:6712..68151692277466.7247632-CDS-M-pyrifera_M_contig10577:6712..6815Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10577 6713..6815 -
1622815566.5558226-CDS-M-pyrifera_M_contig10577:7141..72501622815566.5558226-CDS-M-pyrifera_M_contig10577:7141..7250Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10577 7142..7250 -
1692277466.7349622-CDS-M-pyrifera_M_contig10577:7141..72501692277466.7349622-CDS-M-pyrifera_M_contig10577:7141..7250Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10577 7142..7250 -
1622815566.5675814-CDS-M-pyrifera_M_contig10577:7535..75961622815566.5675814-CDS-M-pyrifera_M_contig10577:7535..7596Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10577 7536..7596 -
1692277466.7511325-CDS-M-pyrifera_M_contig10577:7535..75961692277466.7511325-CDS-M-pyrifera_M_contig10577:7535..7596Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10577 7536..7596 -
1622815566.5767307-CDS-M-pyrifera_M_contig10577:7909..80171622815566.5767307-CDS-M-pyrifera_M_contig10577:7909..8017Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10577 7910..8017 -
1692277466.766224-CDS-M-pyrifera_M_contig10577:7909..80171692277466.766224-CDS-M-pyrifera_M_contig10577:7909..8017Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10577 7910..8017 -
1622815566.5858903-CDS-M-pyrifera_M_contig10577:8293..83141622815566.5858903-CDS-M-pyrifera_M_contig10577:8293..8314Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10577 8294..8314 -
1692277466.7801642-CDS-M-pyrifera_M_contig10577:8293..83141692277466.7801642-CDS-M-pyrifera_M_contig10577:8293..8314Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10577 8294..8314 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10577.1236.1prot_M-pyrifera_M_contig10577.1236.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10577 5549..8314 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10577.1236.1

>prot_M-pyrifera_M_contig10577.1236.1 ID=prot_M-pyrifera_M_contig10577.1236.1|Name=mRNA_M-pyrifera_M_contig10577.1236.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp
MGGIDGLVNCAAWTARATLDTTTVDVWDRMMNTNVRGPLLLVQAVSQTMR
SEGRPGSIVNISSVAAHGGIPKISTYAVSKAALNALTKIHAYELREARII
RVNAINVGWTLTDNEDAIQRVEMDNINWIEEADKGHAMGRLLRPVDVAAT
VGHLLSDSSAMMTGTIIDLHPEMVNNCWG*
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mRNA from alignment at M-pyrifera_M_contig10577:5197..9380-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10577.1236.1 ID=mRNA_M-pyrifera_M_contig10577.1236.1|Name=mRNA_M-pyrifera_M_contig10577.1236.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4184bp|location=Sequence derived from alignment at M-pyrifera_M_contig10577:5197..9380- (Macrocystis pyrifera P11B4 male)
ACAGGGAGGTCATTCCTGGTCACCGGTGGCACTCAAGGCATGGGCCTCGT
CATCTCCGCCTGGTAATGTACCCAGTCTTGAGTTGCTGCTCGATTATTGC
CAGTTATTCTTCACATGGCGGCTGCAAGAATGATTGAGATCTCTTTTTTT
TTGCTGCTGAATCTGATATGTGCTGCCCGCACCGCAAAGTTCAACGCAGG
GGTATGAGGTACCGGTCACCCATTGCAGATCAACCGCCCTGAAGACTTTG
CGACAGCGACCACGCAAGACTTGGCTTATGTTGTTATCCATCCCTCCTCC
ATGGTGACCGATCACGCGTGCTTCGGTAGGGTTGCACCTCATCTTTTCTG
AGGCTGCTCTCGTGGGGAGCTTCACACCTCACCCCAAACACTACTATAGA
GAGTTAATGATAACCTGACCCGATCAATACCCCCGTGGCCTGCGTGGGTG
TATCTCGAATGATGTAGTGAAACGCTTACGGTATTGCAGCGATGTTGGGT
ACATTATTAATTGTATAAATTGTTCCATCAGTCGAGTCGCCCCGTCAGTT
CAGACTTATTTTGGCCAAACTGTGCTAAATCCCTATCGTAGAACGCCTCA
GACTGCATACACTAGCACATAATATAGCCCTTCGCTTGCTCGCTTGGCCC
GTCTTTGTCAAAAGCATCGCCAAAGCTGGCGCACGTGCGGTGACTATCAG
CGCAAGAAATGAAGACACCGGCAAAAAAGCTGTCGTCCGTCTCGCCGAAA
TTTCACCCTCCTGCCAGGCAAGCATAACAATAGATAAAGGGGGAAAAAAC
TACACAGCAGTAGTGGAAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGG
TTGCACACATTCTTCGTATGAGCCATCGCAGAAACCGCGTCAATACTGTG
TGCGCGTTTGATGAACACTACTCGTACAGCGATACAATGTTGATGTTTCC
CCCATCGCCCACTTGAGAATGGCCGTCCTCGTGTGCACTCGGCAGCTCTA
CTACGTACCAGCCGACGTCGCAACCGAAGAGGGTGCTCCAGGTTAGCGTC
CGAGGCGAACCGGCTGATGGGTGGCATCGACGGTCTGGTGAGCGGTCGCG
CAATGCCATTCGGTTTTCATCCAGCCAACTACGAGAATGCGTTTCTGCGT
CCGACATACCCACATGCATTGGTCGTGCTTGACCTTCAACCAGGCTACAT
TGTTGTGCTCATTCCCCACCGCGAGGTTATGGGGATCCTTGGAGCTATTA
GCTTGGCACGGTTTGCAGGAATCGCGCGGAATTCCTGGGGTTGGAGGCGT
TTCGCTGTACTCCTGATGCTTTGGGTGCTGCCGCTGTGATTGGTCGCCGA
ACGTGCTCCTCAGGTGAATTGCGCCGCCTGGACAGCGAGGGCGACGCTAG
ACACCACGACGGTGGATGTGTGGGACCGAATGATGAACACCAATGTACGA
GGTCCGCTTCTACTGGTCCAGGTACTCTGCAGATGGGTTATGGTGGAAGA
ATTTAGACAAGTGTTACGGAAGGTCCTTTTGAGAATGTGTGGTGCACTGA
GAGAGGAATCACGTAAGTAAGCGTTCTAACCGCGCTCGAGACCACTGTGG
TCCTTCTCGAAATCGCAGGCAAACACGCTGGACGACAGTTGACATATAAG
TACCTTCGACATCCCCGACCACCAGTGCATCTATCATAGCAGGTTCTGAG
TTTTCGGCCTCCTTGCAAAGCTGTGCTGTATATGTGGTAGTTTAACACTC
CGTGTCACAAATTGCGCGGAAACGGAATATGCAGGCCGTATCTCAGACTA
TGAGGAGTGAGGGGCGACCAGGATCGATCGTCAACATTTCTAGCGGTGAG
AAGTCAAGTAAGACTATTCTGTATCCGGCGCGAATACGGTAGTACTGTAA
TACCAGGTATAGACTAACCGTCGATTCGAATACTTTCTGCAAGCGTGGCA
AGGATTTCGTTCTACCTTGTCAGCGTGTAAAGACTCGTGTCCTTGTATAT
ACAACGCATTTACCGCACGCTTGCACACCGCGCTGACACCCGCTCCGTGG
CACTCCTTGCCTGTTTGATTCTGACCAAATGGTGCCGGTGATCTCGGCGG
CCGTGGCTGTTTCTACCGTGGGTCGCGCAGTTGCTGCTCACGGGGGCATT
CCGAAAATTAGCACGTACGCCGTCTCCAAGGCAGCACTCAACGCCCTCAC
CAAGATACATGCGTACGAGCTTAGAGAAGCACGAATCATGTGTGTTCCCA
CCCATTCTGCGTCTTCGATGGTGCATATCTGGTTTTGAAAATTGCCGATG
TATACACGCCGGAGATCTGGTGGCGTTTTCGCGTCAAGCCACCGGCTGAA
CAAAGCGTAGCTAGCTGGATTTACGTCGGTGGCTGTCATTTTGTTTATTT
TGTGTTGGTACTACAGTAAGTACATCCTGTGATACTAATATGTGGACAAT
AGTTGCAACCCCAATCACGTTATTGACATTCGGTATGGCGAGGTAGACTT
TCGCGCGGGATGGACCTTGTTCTTAGCAGTTTGATTGGACACTTCGTTTT
GTTCCGGTGTGTGAGCAGGGTCAACGCAATCAACGTGGGGTGGACGCTGA
CAGATAACGAGGATGCCATTCAGCGGGTGGAGATGGACAACATCAACTGG
ATCGAAGAGGCAGACAAGGTGAAACGCGTGCGGTCGCGCCGCCATTTCTT
GGCCCACGATGAGCGTGTGTACGGACCGTCATGCATCTGCTAGTATGGTA
TCGTCTCGTACAACCATATGGACGTATGGTTACATGGACAGAAACAATGC
GTTGGTGCTCGAAAGCTTATGAAATGCGAGAAACAGACATAACTATAGCA
GCCACTGTGCTTGGCTCGGGGGGCACGGCTGGGTTTTGGGTGAAATATCG
TCGAGTAGATCAATGACGGTTAGAACGGTAGCGTAATGACGCGAGGTAGC
CGCTGAGTATCTGATTCCGGCGCGTCGCTTCAGGATGTGCTGTCCAATCC
AGATTCCGTCCTTTGGCGCTGAACGCGATCAATTGTGTGCTCATGTGTGT
ACGCTATCCCCCGGCGACGCGGTGCCGGCACTGGCCTGGCCTTGCAGGGA
CACGCGATGGGTCGGTTGCTACGCCCGGTGGACGTCGCTGCAACCGTCGG
ACATCTACTGTCCGACTCGAGCGCGATGATGACGGGAACAATAATTGATC
TCCATCCCGAAATGGTGAGCATCACCGACCGTGTGATTCGAGAGGCGCAT
TTTTCCTCGAGGCACAAGATCCATGCACCCATTGTGCATTGTACGCCCAG
TGTGCGAGGCCGTTTTTCTGCTTGCCCACAAAGACGAATAGTCAAACTTC
ACCCAGTGTTGGTGAACGATAGGCAACGCACACGGGCGCAATACGCACCG
TGCATAATCCTGATGTAGTGTAAGCCGCGTGGTTAGAGCGCGGAAGAAGC
AGCAGCCGCAGTAGTACTCGCCCATTCAGAGCCACACTAAGCCAAACAGC
TATTGGCGATGTGTGTGCCGGTGCTACGTCACCATGCCCAAACAACGTGA
GGCCCGCCAGTGACACAAGTGACGTTTGCTGACAGAGGAGGCCATTTTGA
GGCGAAGCCAATGAAGCCCGCGTATTGCGGGTACTTGAAGCAAACGCATG
CTCTGTTGTGCCACCATTCGCCGTCATGAAACGCAGGACAAGATTGTTAC
GAAGTACAACAGACTTTTCATGCTTGCCTCCAATGCGCCCGGCTTTGGAC
CTTCAGGAACCCCATGCTCGTAGGTTTCACCCAAGTATGTCCCTCATTGC
GCACGCGACAGGTGAACAACTGCTGGGGCTGATTCTAGGAGAGGTGAAGA
ATTGCAAGGAGCTTCGCTCTTGTTTACGAGCAAAGCTACCAAGGCGTTGT
TATTTACACCACGTCGTGTGCAAGATGTGCGGCCAAGTGTGATACGCTCT
GAGTGTATCTAGTTACGTGGGGCGGAGCTCAAACGCAGTCGGTCCGGCCA
TCAGACGATCGACCTACGACTATCGAATCTACTACCTCCGCCTCTGATAC
GACCTGCAGTGCAAGCGAAATCCGGAGCAGCAGGTTCTCGGTGTTGCAAC
ACCTGTAGTAAATATTAAGGATGGTTGTGGGGTTGTGGGTCGAGGAAGTT
ACTCTTGATGGCAACGAACATAGATATATTCGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig10577:5197..9380-

>mRNA_M-pyrifera_M_contig10577.1236.1 ID=mRNA_M-pyrifera_M_contig10577.1236.1|Name=mRNA_M-pyrifera_M_contig10577.1236.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1080bp|location=Sequence derived from alignment at M-pyrifera_M_contig10577:5197..9380- (Macrocystis pyrifera P11B4 male)
ATGGGTGGCATCGACGGTCTGATGGGTGGCATCGACGGTCTGGTGAATTG
CGCCGCCTGGACAGCGAGGGCGACGCTAGACACCACGACGGTGGATGTGT
GGGACCGAATGATGAACACCAATGTACGAGGTCCGCTTCTACTGGTCCAG
GTGAATTGCGCCGCCTGGACAGCGAGGGCGACGCTAGACACCACGACGGT
GGATGTGTGGGACCGAATGATGAACACCAATGTACGAGGTCCGCTTCTAC
TGGTCCAGGCCGTATCTCAGACTATGAGGAGTGAGGGGCGACCAGGATCG
ATCGTCAACATTTCTAGCGGCCGTATCTCAGACTATGAGGAGTGAGGGGC
GACCAGGATCGATCGTCAACATTTCTAGCGTTGCTGCTCACGGGGGCATT
CCGAAAATTAGCACGTACGCCGTCTCCAAGGCAGCACTCAACGCCCTCAC
CAAGATACATGCGTACGAGCTTAGAGAAGCACGAATCATTTGCTGCTCAC
GGGGGCATTCCGAAAATTAGCACGTACGCCGTCTCCAAGGCAGCACTCAA
CGCCCTCACCAAGATACATGCGTACGAGCTTAGAGAAGCACGAATCATCA
GGGTCAACGCAATCAACGTGGGGTGGACGCTGACAGATAACGAGGATGCC
ATTCAGCGGGTGGAGATGGACAACATCAACTGGATCGAAGAGGCAGACAA
GCAGGGTCAACGCAATCAACGTGGGGTGGACGCTGACAGATAACGAGGAT
GCCATTCAGCGGGTGGAGATGGACAACATCAACTGGATCGAAGAGGCAGA
CAAGGGACACGCGATGGGTCGGTTGCTACGCCCGGTGGACGTCGCTGCAA
CCGTCGGACATCTACTGTCCGACTCGAGCGCGATGATGACGGGAACAATA
ATTGATCTCCATCCCGAAATGGGACACGCGATGGGTCGGTTGCTACGCCC
GGTGGACGTCGCTGCAACCGTCGGACATCTACTGTCCGACTCGAGCGCGA
TGATGACGGGAACAATAATTGATCTCCATCCCGAAATGGTGAACAACTGC
TGGGGCTGAGTGAACAACTGCTGGGGCTGA
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