mRNA_M-pyrifera_M_contig105764.1233.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105764.1233.1 vs. uniprot
Match: A0A7S1CII1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CII1_9STRA) HSP 1 Score: 102 bits (255), Expect = 2.320e-24 Identity = 48/85 (56.47%), Postives = 60/85 (70.59%), Query Frame = 1 Query: 1 KARKVLTLAEKKARNAHDIDYDERNPFKVCAATHKPIYVSSPSVSCPYCGAAHLPEFKGKLCRLCQLSVVGVETLGLVCFADDRK 255 KA+KVL +E KARN+ IDYDERNPF+VC + PIY SP V+CPY A+ PEFK +CR C ++ VG+ETLGLVC A + Sbjct: 259 KAKKVLRASEAKARNSITIDYDERNPFRVCVGSLTPIYKGSPIVACPYTNVAYKPEFKDSVCRACGMAQVGLETLGLVCSAVKTR 343
BLAST of mRNA_M-pyrifera_M_contig105764.1233.1 vs. uniprot
Match: A0A821HMV6_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A821HMV6_9BILA) HSP 1 Score: 89.4 bits (220), Expect = 1.880e-21 Identity = 40/75 (53.33%), Postives = 56/75 (74.67%), Query Frame = 1 Query: 7 RKVLTLAEKKARNAHDIDYDERNPFKVCAATHKPIYVSSPSVSCPYCGAAHLPEFKGKLCRLCQLSVVGVETLGL 231 RKVL++ EK + H ++YDE NPF +CAA++ PIY +P V CP GAA+LPEFKG+LCR+ + + +G E+LGL Sbjct: 14 RKVLSVCEKNPVDEHPLNYDEYNPFDICAASYVPIYRGNPLVKCPLSGAAYLPEFKGQLCRVTKATEIGKESLGL 88
BLAST of mRNA_M-pyrifera_M_contig105764.1233.1 vs. uniprot
Match: A0A7J7MN17_9MAGN (Coatomer subunit alpha n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7MN17_9MAGN) HSP 1 Score: 94.7 bits (234), Expect = 8.840e-21 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 4 ARKVLTLAEKKARNAHDIDYDERNPFKVCAATHKPIYVSSPSVSCPYCGAAHLPEFKGKLCRLCQLSVVGVETLGLVCFADDRK 255 AR+VL +EKK + ++YD RNPF VCAATH PIY V+CPYCGA +P GKLC +C L+VVG + GL+C A ++ Sbjct: 1163 ARQVLQASEKKMTDQTPLNYDFRNPFVVCAATHVPIYRGQKDVACPYCGARFVPAQDGKLCTICDLAVVGSDASGLLCSASQKR 1246
BLAST of mRNA_M-pyrifera_M_contig105764.1233.1 vs. uniprot
Match: A0A7S2RES0_9STRA (Coatomer subunit alpha n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RES0_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.250e-20 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 1 KARKVLTLAEKKARNAHDIDYDERNPFKVCAATHKPIYVSSPSVSCPYCGAAHLPEFKGKLCRLCQLSVVGVETLGLV 234 KA+KV+ +E+ ARN H + YDERNPF + + T PIY SP V C YC AA+ P+ K K+CR C LS+VGVET+GLV Sbjct: 1172 KAQKVVLKSEQMARNEHQLHYDERNPFDIDSDTFLPIYRGSPVVRCAYCNAAYSPDMKNKVCRACGLSLVGVETIGLV 1249
BLAST of mRNA_M-pyrifera_M_contig105764.1233.1 vs. uniprot
Match: A0A183CUA6_9BILA (Uncharacterized protein n=1 Tax=Gongylonema pulchrum TaxID=637853 RepID=A0A183CUA6_9BILA) HSP 1 Score: 92.4 bits (228), Expect = 5.660e-20 Identity = 37/75 (49.33%), Postives = 55/75 (73.33%), Query Frame = 1 Query: 7 RKVLTLAEKKARNAHDIDYDERNPFKVCAATHKPIYVSSPSVSCPYCGAAHLPEFKGKLCRLCQLSVVGVETLGL 231 RKVLT+ EK +AH++ YDE NPF +C+ T KP+Y P V CP+CGA++ P+F G+LC +C+++ VG + +GL Sbjct: 799 RKVLTVTEKDPTDAHELQYDEHNPFVICSRTFKPLYRGKPQVKCPFCGASYAPDFTGELCGVCEVAEVGRDAVGL 873
BLAST of mRNA_M-pyrifera_M_contig105764.1233.1 vs. uniprot
Match: A0A0N5AHK6_9BILA (Coatomer subunit alpha n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5AHK6_9BILA) HSP 1 Score: 91.7 bits (226), Expect = 1.070e-19 Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 7 RKVLTLAEKKARNAHDIDYDERNPFKVCAATHKPIYVSSPSVSCPYCGAAHLPEFKGKLCRLCQLSVVGVETLGL 231 RKVL AEK ++AH ++YDE NPF VCA T P+Y P V CP+CGA + PE GK+C +C+++ +G E GL Sbjct: 1149 RKVLAAAEKDPKDAHKLNYDEHNPFVVCAKTFSPLYRGKPQVKCPFCGACYCPELSGKICNVCEVAEIGKEASGL 1223
BLAST of mRNA_M-pyrifera_M_contig105764.1233.1 vs. uniprot
Match: A0A817G9C2_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817G9C2_9BILA) HSP 1 Score: 89.4 bits (220), Expect = 1.400e-19 Identity = 40/75 (53.33%), Postives = 56/75 (74.67%), Query Frame = 1 Query: 7 RKVLTLAEKKARNAHDIDYDERNPFKVCAATHKPIYVSSPSVSCPYCGAAHLPEFKGKLCRLCQLSVVGVETLGL 231 RKVL++ EK + H ++YDE NPF +CAA++ PIY +P V CP GAA+LPEFKG+LCR+ + + +G E+LGL Sbjct: 14 RKVLSVCEKNPVDEHPLNYDEYNPFDICAASYVPIYRGNPLVKCPLSGAAYLPEFKGQLCRVTKATEIGKESLGL 88
BLAST of mRNA_M-pyrifera_M_contig105764.1233.1 vs. uniprot
Match: A0A7M7NBK8_STRPU (Coatomer subunit alpha n=3 Tax=Echinacea TaxID=7674 RepID=A0A7M7NBK8_STRPU) HSP 1 Score: 90.9 bits (224), Expect = 1.990e-19 Identity = 38/75 (50.67%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 7 RKVLTLAEKKARNAHDIDYDERNPFKVCAATHKPIYVSSPSVSCPYCGAAHLPEFKGKLCRLCQLSVVGVETLGL 231 RK+L EK +AH ++YDE NPF +CAAT+KPIY P CP GA +LP+FKG++CR+ Q++ +G +T+GL Sbjct: 1143 RKILQACEKSPNDAHKLNYDEHNPFDICAATYKPIYRGKPVEKCPLSGACYLPQFKGEVCRVTQVTEIGKDTIGL 1217
BLAST of mRNA_M-pyrifera_M_contig105764.1233.1 vs. uniprot
Match: A0A7S3GXR2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXR2_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.380e-19 Identity = 40/78 (51.28%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 1 KARKVLTLAEKKARNAHDIDYDERNPFKVCAATHKPIYVSSPSVSCPYCGAAHLPEFKGKLCRLCQLSVVGVETLGLV 234 KA+KVL +E++ RN + IDYDERNPF + +T KP+Y +P V C YC A + ++KGKLC +C +S VG++T+GLV Sbjct: 415 KAQKVLQKSEQQGRNEYTIDYDERNPFSLDCSTLKPLYKGTPLVKCSYCAACYAVDYKGKLCLICGISTVGLDTVGLV 492
BLAST of mRNA_M-pyrifera_M_contig105764.1233.1 vs. uniprot
Match: A0A7S3GXJ7_9STRA (Coatomer subunit alpha n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXJ7_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.720e-19 Identity = 40/78 (51.28%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 1 KARKVLTLAEKKARNAHDIDYDERNPFKVCAATHKPIYVSSPSVSCPYCGAAHLPEFKGKLCRLCQLSVVGVETLGLV 234 KA+KVL +E++ RN + IDYDERNPF + +T KP+Y +P V C YC A + ++KGKLC +C +S VG++T+GLV Sbjct: 1172 KAQKVLQKSEQQGRNEYTIDYDERNPFSLDCSTLKPLYKGTPLVKCSYCAACYAVDYKGKLCLICGISTVGLDTVGLV 1249 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105764.1233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105764.1233.1 >prot_M-pyrifera_M_contig105764.1233.1 ID=prot_M-pyrifera_M_contig105764.1233.1|Name=mRNA_M-pyrifera_M_contig105764.1233.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp KARKVLTLAEKKARNAHDIDYDERNPFKVCAATHKPIYVSSPSVSCPYCGback to top mRNA from alignment at M-pyrifera_M_contig105764:376..633- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105764.1233.1 ID=mRNA_M-pyrifera_M_contig105764.1233.1|Name=mRNA_M-pyrifera_M_contig105764.1233.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=258bp|location=Sequence derived from alignment at M-pyrifera_M_contig105764:376..633- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105764:376..633- >mRNA_M-pyrifera_M_contig105764.1233.1 ID=mRNA_M-pyrifera_M_contig105764.1233.1|Name=mRNA_M-pyrifera_M_contig105764.1233.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig105764:376..633- (Macrocystis pyrifera P11B4 male)back to top |