mRNA_M-pyrifera_M_contig105762.1231.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105762.1231.1 vs. uniprot
Match: A0A6N7FSS1_9ACTN (Alanine--tRNA ligase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FSS1_9ACTN) HSP 1 Score: 243 bits (621), Expect = 2.730e-72 Identity = 127/199 (63.82%), Postives = 154/199 (77.39%), Query Frame = 1 Query: 1 DTYGFPYEVTEEVVAERGLTVDRAGFDTDMAEQRERAKAARKGVVQAADFEQVQALLEANGVTEFVGREELTDVSAKILAVTGLGSDLVSVFTDRSPFYAESGGQIGDTGTITTPTGTATVLDTLYAVPGVHRHVVEITEGEILAGQDATASVDVERRNAIRRHHTATHMIHWALREVLGERVKQQGSMAAPDRLRSAF 597 DTYGFP EVT+E+ AERG+ VD AGF+ MAEQR RAKAARKGV A FE Q L+E G TE++ RE T +++LAV G + VF DRSPFYAE+GGQIGD+GTI TPTG A VLDT YA+PG+ RH VE+T+GE+LAGQ+A A VDVERR+AIRR+HT TH++HWALR VLG+ V+QQGS+ AP+RLR F Sbjct: 391 DTYGFPLEVTQEITAERGIDVDTAGFEVAMAEQRRRAKAARKGVEAARHFEAYQELVEQFGPTEYLAREH-TKTDSRVLAVVGGPEARLEVFLDRSPFYAEAGGQIGDSGTIATPTGRARVLDTTYALPGLVRHEVEVTDGELLAGQEARAVVDVERRDAIRRNHTGTHLLHWALRGVLGDHVRQQGSLVAPERLRFDF 588
BLAST of mRNA_M-pyrifera_M_contig105762.1231.1 vs. uniprot
Match: A0A7Y2DRT8_9ACTN (Alanine--tRNA ligase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DRT8_9ACTN) HSP 1 Score: 230 bits (587), Expect = 8.970e-69 Identity = 131/208 (62.98%), Postives = 152/208 (73.08%), Query Frame = 1 Query: 1 DTYGFPYEVTEEVVAERGLTVDRAGFDTDMAEQRERAKAARKG-VVQAADFEQVQALLEANGVTEFVGREELTDVSAKILAVTGLGS--DLVSVFTDRSPFYAESGGQIGDTGTI--TTPTGTAT----VLDTLYAVPGVHRHVVEITEGEILAGQDATASVDVERRNAIRRHHTATHMIHWALREVLGERVKQQGSMAAPDRLRSAF 597 DTYGFP EVT EV AERG VD AGFD +MA+QRERAKAA+KG A+D + V L+E +T FVGRE LTDV +++LAVTG + D +S+F +SPFYAE+GGQIGDTG I T G T VLDT YAVP VHRHVVE+ EG AG ASVDV+RR+ IRRHHTATH++HWALREVLGE KQQGS+ APDRLR F Sbjct: 175 DTYGFPKEVTAEVAAERGYGVDLAGFDVEMAKQRERAKAAQKGGSAIASDSDTVATLVERGQLTVFVGREHLTDVQSEVLAVTGSENPDDPISIFLTQSPFYAEAGGQIGDTGEIWKTDADGNVTARGRVLDTTYAVPEVHRHVVEVVEGSFDAGDQVLASVDVDRRDRIRRHHTATHILHWALREVLGEGAKQQGSLVAPDRLRFDF 382
BLAST of mRNA_M-pyrifera_M_contig105762.1231.1 vs. uniprot
Match: A0A7V9EVH9_9ACTN (Alanine--tRNA ligase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9EVH9_9ACTN) HSP 1 Score: 225 bits (574), Expect = 1.660e-67 Identity = 116/199 (58.29%), Postives = 143/199 (71.86%), Query Frame = 1 Query: 1 DTYGFPYEVTEEVVAERGLTVDRAGFDTDMAEQRERAKAARKGVVQAADFEQVQALLEANGVTEFVGREELTDVSAKILAVTGLGSDLVSVFTDRSPFYAESGGQIGDTGTITTPTGTATVLDTLYAVPGVHRHVVEITEGEILAGQDATASVDVERRNAIRRHHTATHMIHWALREVLGERVKQQGSMAAPDRLRSAF 597 DT+GFP E+TEE+ + G+ VDRAGFD MAEQR R K ARKG E + L++ +GVT+F GREE + A++L V G D + VF DR+PFYAESGGQ+GDTGTITT TG VLDT A+PG+HRH + EGEI QDA A++DVERR AIRR+HT TH++HWALRE+LG VKQQGS+ AP+ LR F Sbjct: 104 DTFGFPIEITEEMATDAGVAVDRAGFDAAMAEQRARGKDARKGGSAEVVMETYRELVDQHGVTDFTGREE-HETKARVLGVFGRVGDELEVFLDRTPFYAESGGQVGDTGTITTATGRLDVLDTTLALPGLHRHSARLVEGEITPSQDAVATIDVERRQAIRRNHTGTHLLHWALREILGGHVKQQGSLVAPEYLRFDF 301
BLAST of mRNA_M-pyrifera_M_contig105762.1231.1 vs. uniprot
Match: UPI001D105136 (alanine--tRNA ligase n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D105136) HSP 1 Score: 230 bits (586), Expect = 3.000e-67 Identity = 126/201 (62.69%), Postives = 148/201 (73.63%), Query Frame = 1 Query: 1 DTYGFPYEVTEEVVAERGLTVDRAGFDTDMAEQRERAKAA--RKGVVQAADFEQVQALLEANGVTEFVGREELTDVSAKILAVTGLGSDLVSVFTDRSPFYAESGGQIGDTGTITTPTGTATVLDTLYAVPGVHRHVVEITEGEILAGQDATASVDVERRNAIRRHHTATHMIHWALREVLGERVKQQGSMAAPDRLRSAF 597 DTYGFP EVT E+ RG+TVD GFD++MA QRER++AA R GV + +ALL +G T F GREE T SA +LAV G G +F DR+PFYAESGGQ+GDTGTITTPTGTA V+DT YA+PG+HRH E+ EG I GQ+ATAS+D ERR AIRR+HT TH++HWALREVLGE VKQQGS PDRLR F Sbjct: 403 DTYGFPLEVTSEMADLRGVTVDLEGFDSEMAAQRERSRAAGKRTGVAAGESADAERALLAEHGPTVFTGREEET-TSATVLAVIGDG-----LFLDRTPFYAESGGQVGDTGTITTPTGTARVVDTTYALPGLHRHTFELVEGTIEPGQEATASIDAERRAAIRRNHTGTHVLHWALREVLGEHVKQQGSWVGPDRLRFDF 597
BLAST of mRNA_M-pyrifera_M_contig105762.1231.1 vs. uniprot
Match: A0A7Y2ICP8_9ACTN (Alanine--tRNA ligase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2ICP8_9ACTN) HSP 1 Score: 222 bits (566), Expect = 2.040e-64 Identity = 120/205 (58.54%), Postives = 144/205 (70.24%), Query Frame = 1 Query: 1 DTYGFPYEVTEEVVAERGLTVDRAGFDTDMAEQRERAKAARKGVVQAADFEQVQALLEANGVTEFVGREELTDVSAKILAVTGLGSDLVSVFTDRSPFYAESGGQIGDTGTIT------TPTGTATVLDTLYAVPGVHRHVVEITEGEILAGQDATASVDVERRNAIRRHHTATHMIHWALREVLGERVKQQGSMAAPDRLRSAF 597 DTYGFP EVT EV AERG +D GF+T+M +QRERAKA++KG V AAD + V L+E +T FVGR+ T+V A++LAVTG S+F ++SPFYAE+GGQ GDTG I A V DT+YAVP V RH+VE+T GE G S+DV+RRN IRRHHTATH+IHWALREVLGE KQQGS+ APDRLR F Sbjct: 392 DTYGFPKEVTAEVAAERGHGIDIDGFETEMTKQRERAKASKKGAVIAADADVVSQLVEDGNLTIFVGRDHFTNVQAEVLAVTGGDDGAPSIFLNQSPFYAEAGGQSGDTGVIQKVDAAGVVVAEARVTDTIYAVPEVARHLVEMTTGEFAPGDSVIVSIDVDRRNRIRRHHTATHLIHWALREVLGEGAKQQGSLVAPDRLRFDF 596
BLAST of mRNA_M-pyrifera_M_contig105762.1231.1 vs. uniprot
Match: A0A7X7D6X9_9ACTN (Alanine--tRNA ligase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7D6X9_9ACTN) HSP 1 Score: 218 bits (555), Expect = 6.310e-64 Identity = 117/203 (57.64%), Postives = 146/203 (71.92%), Query Frame = 1 Query: 1 DTYGFPYEVTEEVVAERGLTVDRAGFDTDMAEQRERAKAARK--GVVQAADFEQVQALLEANGVTEFVGREELTDVSAKILAVTGLGSDLVSVFTDRSPFYAESGGQIGDTGTITTPTGT--ATVLDTLYAVPGVHRHVVEITEGEILAGQDATASVDVERRNAIRRHHTATHMIHWALREVLGERVKQQGSMAAPDRLRSAF 597 DTYGFP +VT E+V +RG ++DR GFD MAEQR RA+ A K GV + + VQA+L+A+G TEFVGRE T +A+++ V + VF DRSPFYAESGGQIGDTGTIT P G+ V+DT+ A+PG+HRHVVE+ G I G A++DV+RRN+IRR+HT TH++HWALREVLG VKQQGS PDRLR F Sbjct: 203 DTYGFPLDVTSEIVDDRGFSLDRPGFDAAMAEQRRRAREAGKKGGVSAGEEADAVQAVLDASGTTEFVGREVDT-ATARVVGVIRSEDGALGVFLDRSPFYAESGGQIGDTGTITAPDGSFVGNVVDTVLALPGLHRHVVEVVSGSIEPGDAVEAAIDVDRRNSIRRNHTGTHLLHWALREVLGTHVKQQGSWVGPDRLRFDF 404
BLAST of mRNA_M-pyrifera_M_contig105762.1231.1 vs. uniprot
Match: A0A7K1C636_9ACTN (Alanine--tRNA ligase n=2 Tax=root TaxID=1 RepID=A0A7K1C636_9ACTN) HSP 1 Score: 221 bits (562), Expect = 8.160e-64 Identity = 113/200 (56.50%), Postives = 146/200 (73.00%), Query Frame = 1 Query: 1 DTYGFPYEVTEEVVAERGLTVDRAGFDTDMAEQRERAKAARKGVVQAAD-FEQVQALLEANGVTEFVGREELTDVSAKILAVTGLGSDLVSVFTDRSPFYAESGGQIGDTGTITTPTGTATVLDTLYAVPGVHRHVVEITEGEILAGQDATASVDVERRNAIRRHHTATHMIHWALREVLGERVKQQGSMAAPDRLRSAF 597 DTYGFP EVTEE+VAER +T+D AGF+ +M QR+RAKAARKG + +Q + +L+A+G TEF+G E ++++AV L + VF DRSPFYAESGGQ+GDTGTIT P GT VLDT +A+PG+ RH+ G++ GQ+ AS+D+ERR AIRRHHTATH++HWALREVLG+ VKQ GS+ +RLR F Sbjct: 407 DTYGFPLEVTEEIVAERNVTIDTAGFEEEMGRQRQRAKAARKGAAHGPERMDQYREILDASGQTEFLGYAE-DSTRSRVVAVVELEDGDLEVFLDRSPFYAESGGQVGDTGTITGPDGTLKVLDTTFALPGLRRHLCRPLGGDVAVGQEVEASIDIERRTAIRRHHTATHVLHWALREVLGDHVKQAGSLVDDERLRFDF 605
BLAST of mRNA_M-pyrifera_M_contig105762.1231.1 vs. uniprot
Match: A0A7V8WWC3_9ACTN (Alanine--tRNA ligase (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V8WWC3_9ACTN) HSP 1 Score: 217 bits (553), Expect = 5.430e-63 Identity = 116/199 (58.29%), Postives = 146/199 (73.37%), Query Frame = 1 Query: 1 DTYGFPYEVTEEVVAERGLTVDRAGFDTDMAEQRERAKAARKGVVQAADFEQVQALLEANGVTEFVGREELTDVSAKILAVTGLGSDLVSVFTDRSPFYAESGGQIGDTGTITTPTGTATVLDTLYAVPGVHRHVVEITEGEILAGQDATASVDVERRNAIRRHHTATHMIHWALREVLGERVKQQGSMAAPDRLRSAF 597 DTYGFP EVT+E+ AERG+ VD GF+ M EQR ++KA K V A+ Q +L+ G +EFVGREE ++ AK+LAV G S+F DR+PFYAESGGQ+GDTG+ITT TG A V DT++A+PG+ RHVVE+ EGE+ GQDA A++DV RR+AIRR+HT TH++HWALREVLG VKQQGS +RLR F Sbjct: 396 DTYGFPLEVTQEMAAERGVAVDLEGFEALMGEQRRQSKAGAKHVDAYANLTSFQEVLDRFGPSEFVGREEF-EIKAKVLAVVG-----DSIFLDRTPFYAESGGQVGDTGSITTDTGRAEVRDTVFALPGLSRHVVEVVEGELTPGQDAIAAIDVARRDAIRRNHTGTHILHWALREVLGSEVKQQGSDVDDERLRFDF 588
BLAST of mRNA_M-pyrifera_M_contig105762.1231.1 vs. uniprot
Match: UPI001AA02ED7 (alanine--tRNA ligase n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA02ED7) HSP 1 Score: 217 bits (552), Expect = 1.950e-62 Identity = 114/199 (57.29%), Postives = 143/199 (71.86%), Query Frame = 1 Query: 1 DTYGFPYEVTEEVVAERGLTVDRAGFDTDMAEQRERAKAARKGVVQAADFEQVQALLEANGVTEFVGREELTDVSAKILAVTGLGSDLVSVFTDRSPFYAESGGQIGDTGTITTPTGTATVLDTLYAVPGVHRHVVEITEGEILAGQDATASVDVERRNAIRRHHTATHMIHWALREVLGERVKQQGSMAAPDRLRSAF 597 DT+GFP E+T+E+ AERG+TVD GF +MAEQR RAK ARK E+ LLE G TEF GREE + A++LAV VS+ DR+PFYAE+GGQ+GDTGTI + TG A V DT+Y PG+ RH + EG++ GQ+ TAS+D +RR+AIRR+HTATH++HWALREVLG+ VKQQGS+ APDRLR F Sbjct: 394 DTHGFPLELTQEIAAERGVTVDEEGFAAEMAEQRRRAKEARKAEGADELAERFSELLEQFGPTEFTGREEY-ESKARVLAVLDDADGAVSIVLDRTPFYAEAGGQVGDTGTIVSETGRAEVFDTVYGAPGLVRHRARVVEGKLDPGQEVTASIDGDRRDAIRRNHTATHLLHWALREVLGDHVKQQGSLVAPDRLRFDF 591
BLAST of mRNA_M-pyrifera_M_contig105762.1231.1 vs. uniprot
Match: A0A6I2YU56_9ACTN (Alanine--tRNA ligase n=7 Tax=root TaxID=1 RepID=A0A6I2YU56_9ACTN) HSP 1 Score: 217 bits (552), Expect = 2.070e-62 Identity = 117/200 (58.50%), Postives = 144/200 (72.00%), Query Frame = 1 Query: 1 DTYGFPYEVTEEVVAERGLTVDRAGFDTDMAEQRERAKAARK-GVVQAADFEQVQALLEANGVTEFVGREELTDVSAKILAVTGLGSDLVSVFTDRSPFYAESGGQIGDTGTITTPTGTATVLDTLYAVPGVHRHVVEITEGEILAGQDATASVDVERRNAIRRHHTATHMIHWALREVLGERVKQQGSMAAPDRLRSAF 597 DTYGFP EVT EV AERG+TVD GFD +M +QRERAK ARK G V + +++ GVTEFVG + A+ILA+ D V VF DRSPFYAESGGQ+GDTG + T +GT V DT +A+PG+ RH I+ G + AGQ A AS+DV+RR+AIRR+HT+TH++HWALREVLG+ VKQQGSM +PDRLR F Sbjct: 400 DTYGFPLEVTTEVTAERGVTVDLPGFDAEMTQQRERAKQARKSGNVGEDRLVAYREIVDQFGVTEFVGYSD-DSCEARILAIIPGDDDTVEVFLDRSPFYAESGGQVGDTGLLVTGSGTVEVADTTFALPGLRRHTGRISAGSVDAGQPAQASIDVDRRSAIRRNHTSTHLLHWALREVLGDHVKQQGSMVSPDRLRFDF 598 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105762.1231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105762.1231.1 >prot_M-pyrifera_M_contig105762.1231.1 ID=prot_M-pyrifera_M_contig105762.1231.1|Name=mRNA_M-pyrifera_M_contig105762.1231.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=199bp DTYGFPYEVTEEVVAERGLTVDRAGFDTDMAEQRERAKAARKGVVQAADFback to top mRNA from alignment at M-pyrifera_M_contig105762:2..598+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105762.1231.1 ID=mRNA_M-pyrifera_M_contig105762.1231.1|Name=mRNA_M-pyrifera_M_contig105762.1231.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=597bp|location=Sequence derived from alignment at M-pyrifera_M_contig105762:2..598+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105762:2..598+ >mRNA_M-pyrifera_M_contig105762.1231.1 ID=mRNA_M-pyrifera_M_contig105762.1231.1|Name=mRNA_M-pyrifera_M_contig105762.1231.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1194bp|location=Sequence derived from alignment at M-pyrifera_M_contig105762:2..598+ (Macrocystis pyrifera P11B4 male)back to top |