mRNA_M-pyrifera_M_contig10573.1229.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10573.1229.1 vs. uniprot
Match: D8LEH7_ECTSI (Proteasome endopeptidase complex n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEH7_ECTSI) HSP 1 Score: 177 bits (448), Expect = 7.160e-53 Identity = 88/120 (73.33%), Postives = 102/120 (85.00%), Query Frame = 1 Query: 130 ATTILASTFDGGVVIGTDSRTSQGTFVVNRLSDKIAPVYPTGIFLARSGNTADTQYVAGVVEAKLDAYRTQFGRDPTVRAAATVTRNLCYANKDGISASFICAGWDAREGSSVFIVDNVG 489 ATT++A+ FDGGVVIG DSRTSQG+FV N +DKI PV P G+FLARSG++ADTQ+VAGV+EAKL+AYRT+FGR PTVRAAAT TRNLCYANKD +SA ICAGWD+REG SVF V G Sbjct: 22 ATTLVAARFDGGVVIGADSRTSQGSFVANSGTDKITPVSP-GVFLARSGSSADTQFVAGVIEAKLEAYRTEFGRYPTVRAAATATRNLCYANKDQLSAGIICAGWDSREGGSVFSVPQGG 140
BLAST of mRNA_M-pyrifera_M_contig10573.1229.1 vs. uniprot
Match: A0A834RFC4_SARSC (Proteasome subunit beta n=2 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A834RFC4_SARSC) HSP 1 Score: 120 bits (300), Expect = 1.240e-30 Identity = 57/120 (47.50%), Postives = 82/120 (68.33%), Query Frame = 1 Query: 133 TTILASTFDGGVVIGTDSRTSQGTFVVNRLSDKIAPVYPTGIFLARSGNTADTQYVAGVVEAKLDAYRTQFGRDPTVRAAATVTRNLCYANKDGISASFICAGWDAREGSSVFIVDNVGI 492 TTI+A FDGGVV+G DSRT+ G F+VNR++DK+ + I++ RSG+ ADTQ +A +V LD Y + G TV+ AA + R++CY +D ++A ICAGWDAREG+ V+ + G+ Sbjct: 39 TTIMAVEFDGGVVVGADSRTTSGAFIVNRVTDKLTKITDK-IYVCRSGSAADTQAIADIVAYHLDFYEMETGEPATVKIAANLFRDMCYNYRDSLTAGIICAGWDAREGAQVYTIPLGGM 157
BLAST of mRNA_M-pyrifera_M_contig10573.1229.1 vs. uniprot
Match: A0A7S2WTH2_9STRA (Proteasome endopeptidase complex n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTH2_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.160e-30 Identity = 57/115 (49.57%), Postives = 79/115 (68.70%), Query Frame = 1 Query: 133 TTILASTFDGGVVIGTDSRTSQGTFVVNRLSDKIAPVYPTGIFLARSGNTADTQYVAGVVEAKLDAYRTQFGRDPTVRAAATVTRNLCYANKDGISASFICAGWDAREGSSVFIV 477 TTI+A FDGGVV+G DSR S GT++ NR+SDK+A ++ T IF+ RSG+ ADTQ ++ V L ++ T+ R PTV+ AAT+ R + Y NKD + A I GWD EG SV+++ Sbjct: 22 TTIMACCFDGGVVLGADSRVSTGTYIANRVSDKVAALHDT-IFMCRSGSAADTQAISDYVRYWLSSHATEVNRPPTVKTAATLARRIAYENKDALLAGVIVGGWDPVEGGSVYVI 135
BLAST of mRNA_M-pyrifera_M_contig10573.1229.1 vs. uniprot
Match: A0A7S2WTD3_9STRA (Proteasome endopeptidase complex n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTD3_9STRA) HSP 1 Score: 119 bits (297), Expect = 4.950e-30 Identity = 57/115 (49.57%), Postives = 79/115 (68.70%), Query Frame = 1 Query: 133 TTILASTFDGGVVIGTDSRTSQGTFVVNRLSDKIAPVYPTGIFLARSGNTADTQYVAGVVEAKLDAYRTQFGRDPTVRAAATVTRNLCYANKDGISASFICAGWDAREGSSVFIV 477 TTI+A FDGGVV+G DSR S GT++ NR+SDK+A ++ T IF+ RSG+ ADTQ ++ V L ++ T+ R PTV+ AAT+ R + Y NKD + A I GWD EG SV+++ Sbjct: 22 TTIMACCFDGGVVLGADSRVSTGTYIANRVSDKVAALHDT-IFMCRSGSAADTQAISDYVRYWLSSHATEVNRPPTVKTAATLARRIAYENKDALLAGVIVGGWDPVEGGSVYVI 135
BLAST of mRNA_M-pyrifera_M_contig10573.1229.1 vs. uniprot
Match: A0A7S4J7I0_9EUKA (Proteasome subunit beta n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4J7I0_9EUKA) HSP 1 Score: 119 bits (297), Expect = 5.310e-30 Identity = 55/115 (47.83%), Postives = 81/115 (70.43%), Query Frame = 1 Query: 133 TTILASTFDGGVVIGTDSRTSQGTFVVNRLSDKIAPVYPTGIFLARSGNTADTQYVAGVVEAKLDAYRTQFGRDPTVRAAATVTRNLCYANKDGISASFICAGWDAREGSSVFIV 477 T+I+A FDGGV++G DSRTS G ++ NR+SDK+ + I++ RSG+ ADTQ ++ +V A+L +RTQ+G+ P V AA+ R +CY NK+G++A I AGWDA +G V+ V Sbjct: 58 TSIMAVAFDGGVIVGADSRTSTGVYIANRVSDKVTAI-DDKIYVCRSGSAADTQAISDIVTAQLQQHRTQYGKPPKVITAASYFREMCYHNKNGLTAGIIVAGWDAAKGGQVYSV 171
BLAST of mRNA_M-pyrifera_M_contig10573.1229.1 vs. uniprot
Match: A0A7S3M7L5_9STRA (Proteasome subunit beta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7L5_9STRA) HSP 1 Score: 117 bits (294), Expect = 5.500e-30 Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 1 Query: 133 TTILASTFDGGVVIGTDSRTSQGTFVVNRLSDKIAPVYPTGIFLARSGNTADTQYVAGVVEAKLDAYRTQFGRDPTVRAAATVTRNLCYANKDGISASFICAGWDAREGSSVF 471 TTI+A TFDGGVV+G DSRTS G++V NR+SDKI P++ ++ RSG+ ADTQ V+ V+ ++++ T+ GR P V+ A + R +CY NKD + A IC GWD EG V+ Sbjct: 18 TTIMAVTFDGGVVLGADSRTSTGSYVANRVSDKIVPIHDY-VWACRSGSAADTQAVSDYVKYYINSHSTELGRLPRVKTCANLMRKICYNNKDRMQAGMICGGWDPYEGGQVY 129
BLAST of mRNA_M-pyrifera_M_contig10573.1229.1 vs. uniprot
Match: A0A0X3PQH2_SCHSO (Proteasome endopeptidase complex n=2 Tax=Diphyllobothriidae TaxID=28843 RepID=A0A0X3PQH2_SCHSO) HSP 1 Score: 118 bits (295), Expect = 5.670e-30 Identity = 58/120 (48.33%), Postives = 79/120 (65.83%), Query Frame = 1 Query: 133 TTILASTFDGGVVIGTDSRTSQGTFVVNRLSDKIAPVYPTGIFLARSGNTADTQYVAGVVEAKLDAYRTQFGRDPTVRAAATVTRNLCYANKDGISASFICAGWDAREGSSVFIVDNVGI 492 TT++A FDGGVVIG DSRTS GTF NR++DK+ P+ I+ RSG+ ADTQ +A +V +LD + + GR+PTV AATV RNLCY +D + A AGWD+ G ++ + G+ Sbjct: 30 TTLVACQFDGGVVIGADSRTSSGTFATNRITDKLTPLTKY-IYCCRSGSAADTQAIADIVRYQLDFHTIEMGREPTVFEAATVFRNLCYNYRDDLLAGIFVAGWDSENGGQIYSIPVGGM 148
BLAST of mRNA_M-pyrifera_M_contig10573.1229.1 vs. uniprot
Match: A0A4S2LXL8_OPIFE (Proteasome endopeptidase complex n=2 Tax=Opisthorchis TaxID=6197 RepID=A0A4S2LXL8_OPIFE) HSP 1 Score: 118 bits (295), Expect = 5.670e-30 Identity = 58/120 (48.33%), Postives = 79/120 (65.83%), Query Frame = 1 Query: 133 TTILASTFDGGVVIGTDSRTSQGTFVVNRLSDKIAPVYPTGIFLARSGNTADTQYVAGVVEAKLDAYRTQFGRDPTVRAAATVTRNLCYANKDGISASFICAGWDAREGSSVFIVDNVGI 492 TT+ A +DGGVVIG DSRTS GT+VVNR++DK+ P+ I+ RSG+ ADTQ VA +V +LD +R Q +DPTV AA R+LCY+ +D +SA AGWD G ++ + G+ Sbjct: 31 TTLFACQYDGGVVIGADSRTSSGTYVVNRVTDKLTPL-AKNIYCCRSGSAADTQKVADIVRYQLDFHRMQMNKDPTVLEAAVTCRSLCYSYRDDLSAGLFVAGWDESGGGQIYSIPLGGM 149
BLAST of mRNA_M-pyrifera_M_contig10573.1229.1 vs. uniprot
Match: A0A1Y1WB45_9FUNG (Proteasome subunit beta n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WB45_9FUNG) HSP 1 Score: 117 bits (292), Expect = 1.020e-29 Identity = 54/113 (47.79%), Postives = 79/113 (69.91%), Query Frame = 1 Query: 133 TTILASTFDGGVVIGTDSRTSQGTFVVNRLSDKIAPVYPTGIFLARSGNTADTQYVAGVVEAKLDAYRTQFGRDPTVRAAATVTRNLCYANKDGISASFICAGWDAREGSSVF 471 TTI+A FDGGVV+G DSRT+ G ++ NR++DK+ ++ I+ RSG+ ADTQ VA +V+ + Y Q G PTV+ AA++ + +CY NK+ +SA I AGWD R+G+SV+ Sbjct: 13 TTIMAVQFDGGVVVGADSRTTTGAYIANRVTDKLTKIHDR-IYCCRSGSAADTQAVADIVQYHMQMYTAQHGEAPTVKVAASLFQEICYQNKNNLSAGIIVAGWDERDGASVY 124
BLAST of mRNA_M-pyrifera_M_contig10573.1229.1 vs. uniprot
Match: T2MGV4_HYDVU (Proteasome subunit beta n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2MGV4_HYDVU) HSP 1 Score: 117 bits (293), Expect = 1.240e-29 Identity = 59/120 (49.17%), Postives = 78/120 (65.00%), Query Frame = 1 Query: 133 TTILASTFDGGVVIGTDSRTSQGTFVVNRLSDKIAPVYPTGIFLARSGNTADTQYVAGVVEAKLDAYRTQFGRDPTVRAAATVTRNLCYANKDGISASFICAGWDAREGSSVFIVDNVGI 492 TTI+A FDGGVV+G DSRT+ G++V NR++DK+ PV IF RSG+ ADTQ +A V +LD + + GR V+ AA + RN+CY +D SA I AGWD REG V+ V G+ Sbjct: 35 TTIMAVEFDGGVVVGADSRTTSGSYVANRVTDKLTPV-TDNIFCCRSGSAADTQAIADQVRYELDMHMAESGRQALVKTAANLFRNVCYERRDSASAGIIVAGWDEREGGQVYSVPIGGM 153 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10573.1229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10573.1229.1 >prot_M-pyrifera_M_contig10573.1229.1 ID=prot_M-pyrifera_M_contig10573.1229.1|Name=mRNA_M-pyrifera_M_contig10573.1229.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp LAIAAAAAVIRCCALRMPSVLGGLAASIAAAASFLLLLATFARATTILASback to top mRNA from alignment at M-pyrifera_M_contig10573:7905..10299+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10573.1229.1 ID=mRNA_M-pyrifera_M_contig10573.1229.1|Name=mRNA_M-pyrifera_M_contig10573.1229.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2395bp|location=Sequence derived from alignment at M-pyrifera_M_contig10573:7905..10299+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10573:7905..10299+ >mRNA_M-pyrifera_M_contig10573.1229.1 ID=mRNA_M-pyrifera_M_contig10573.1229.1|Name=mRNA_M-pyrifera_M_contig10573.1229.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=990bp|location=Sequence derived from alignment at M-pyrifera_M_contig10573:7905..10299+ (Macrocystis pyrifera P11B4 male)back to top |