mRNA_M-pyrifera_M_contig105700.1225.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105700.1225.1 vs. uniprot
Match: A0A7S1CIM6_9STRA (Coatomer subunit delta n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIM6_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.160e-21 Identity = 54/129 (41.86%), Postives = 69/129 (53.49%), Query Frame = 1 Query: 175 AVADHVSVESEELLRVKMERDGSVKAMQVNGKLSLLARHVDGSHAQLQLRLGANPGWQMQPHPQLSKPALADEATLRLKDPSRSFPVGERAGLLRWKLPTGADGAEAPLALVCWPEEVGDGNVVMNIEY 561 A V SEE + V M RDG + M+V G L L + D S ++ L G ++ Q HP +SKP E L LKD SR FP G G+LRW+ T D + P+ CWPEEVG G + +NIEY Sbjct: 16 AAGTDVECRSEERITVNMTRDGGLHGMEVKGTLQLQVHNPDASRVRVLLDRGDLTDFKFQSHPNISKPKWNAEGVLELKDASRGFPQGADVGVLRWRSNT-RDATKVPIVFNCWPEEVGGGEINVNIEY 143
BLAST of mRNA_M-pyrifera_M_contig105700.1225.1 vs. uniprot
Match: A0A7R9UGB9_9STRA (Coatomer subunit delta n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGB9_9STRA) HSP 1 Score: 100 bits (249), Expect = 4.980e-21 Identity = 51/124 (41.13%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 190 VSVESEELLRVKMERDGSVKAMQVNGKLSLLARHVDGSHAQLQLRLGANPGWQMQPHPQLSKPALADEATLRLKDPSRSFPVGERAGLLRWKLPTGADGAEAPLALVCWPEEVGDGNVVMNIEY 561 +++ EE L V++ R+G V+AM+V G LSL A + + +QL+L PG Q HP+++K + L LKD + FPVG G+LRW T + A PL++ CWPE+ GDGN ++IEY Sbjct: 293 LTLSVEEKLSVRLSREGVVEAMEVKGALSLTANVNEAARCGVQLQLTGQPGMTFQTHPKIAKGPFDESQMLTLKDQRKGFPVGRGVGVLRWSFATSEESA-LPLSINCWPEDTGDGNFTVSIEY 415
BLAST of mRNA_M-pyrifera_M_contig105700.1225.1 vs. uniprot
Match: A0A1Y2HZC7_9FUNG (Coatomer subunit delta n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HZC7_9FUNG) HSP 1 Score: 98.6 bits (244), Expect = 2.480e-20 Identity = 56/148 (37.84%), Postives = 86/148 (58.11%), Query Frame = 1 Query: 190 VSVESEELLRVKMERDGSVKAMQVNGKLSLLARHVDGSHAQLQLRLGANPGWQMQPHPQLSKPALADEATLRLKDPSRSFPVGERAGLLRWKLPTGADGAEAPLALVCWPEEVGDGNVVMNIEYAFAEPPERSPDATPFSLHNVVVSV 633 V V +E + V + RDG ++ M+V G LS+ + A++Q++L AN Q + HP + K A D +TL L+D S+SFPVG+ +G+L+W+L D + PL++ CWP DG+ +NIEY AT +L NVV++V Sbjct: 314 VHVILDERVVVSVNRDGGLQQMEVKGDLSVHVTTPAAAQARVQVQLPANSAAQFKTHPNMDKKAWTDSSTLTLRDASKSFPVGQPSGVLKWRL-VSKDESAVPLSINCWPNPTNDGHCEVNIEYELL--------ATHMTLRNVVLAV 452
BLAST of mRNA_M-pyrifera_M_contig105700.1225.1 vs. uniprot
Match: A0A0L0T2J1_ALLM3 (Coatomer subunit delta n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T2J1_ALLM3) HSP 1 Score: 90.1 bits (222), Expect = 2.180e-17 Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 190 VSVESEELLRVKMERDGSVKAMQVNGKLSLLARHVDGSHAQLQLRLGAN-PGWQMQPHPQLSKPALADEATLRLKDPSRSFPVGERAGLLRWKLPTGADGAEAPLALVCWPEEVGDGNVVMNIEYAFAEPPERSPDAT 600 V V +E + + RDG ++ ++V G L + D +HA +Q+ L ++ PG Q + HP + K + +TL LKD S++FPVG+ G+L+W+ +D A+ PLA+ CWP DG +NIEY P R + T Sbjct: 300 VHVTLDERVTCIVNRDGGLQQLEVKGDLYVHVTSPDAAHAHVQVTLPSDLPGAQFKTHPNMDKKLWSASSTLALKDASKTFPVGQPTGVLKWRF-VSSDEAQVPLAINCWPNPSADGTCDVNIEYELLVPHLRLTNVT 436
BLAST of mRNA_M-pyrifera_M_contig105700.1225.1 vs. uniprot
Match: A0A4Q1BVM2_TREME (Coatomer subunit delta n=2 Tax=Tremella mesenterica TaxID=5217 RepID=A0A4Q1BVM2_TREME) HSP 1 Score: 89.0 bits (219), Expect = 5.090e-17 Identity = 53/152 (34.87%), Postives = 88/152 (57.89%), Query Frame = 1 Query: 184 DHVSVESEELLRVKMERDGSVKAMQVNGKLSLLARHVDGSHAQLQLRLGANPGWQMQ--PHPQLSKPALADEATLRLKDPSRSFPVGERAGLLRWKLPTGADGAEAPLALVCWPEEVGDGNVVMNIEYAFAEPPERSPDATPFSLHNVVVSV 633 D V V +E L + + RDG V++ ++ G L L R D + ++L+L L ++Q HP ++K + + E + LKDPSRSFPVG+ G+LRW++ T D + PL++ CWP+ GDG + +EY +++ +L NV++S+ Sbjct: 259 DSVHVTIKEQLAITLLRDGGVQSFELKGDLDL--RITDAALSKLRLTLAPKDYTELQFKQHPNVAKFSPSGEKIIALKDPSRSFPVGQGLGVLRWRM-TAKDESNVPLSITCWPQPRGDGKSDIAVEYEL--------ESSHLTLRNVLISI 399
BLAST of mRNA_M-pyrifera_M_contig105700.1225.1 vs. uniprot
Match: UPI00193AA37D (coatomer subunit delta-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193AA37D) HSP 1 Score: 87.4 bits (215), Expect = 1.790e-16 Identity = 49/130 (37.69%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 172 AAVADHVSVESEELLRVKMERDGSVKAMQVNGKLSLLARHVDGSHAQLQLRLGANPGWQMQPHPQLSKPALADEATLRLKDPSRSFPVGERAGLLRWKLPTGADGAEAPLALVCWPEEVGDGNVVMNIEY 561 AA+ + V V EE L V +RDG ++ MQ+ G +L L + + G Q+Q HP + K A + LK+ S+SFP+ + G+L+W+L T D + PLA+ CWP E GDG +NIEY Sbjct: 261 AALIESVHVRVEERLNVSADRDGGLQQMQLQGLCTLHITDEKYGFILLNIENNDDTGCQLQTHPNVDKKAFQSNGVIGLKNSSKSFPMKQDVGVLKWRLQT-TDESLMPLAINCWPNESGDGGCDVNIEY 389
BLAST of mRNA_M-pyrifera_M_contig105700.1225.1 vs. uniprot
Match: A0A0D0C6X4_9AGAR (Coatomer subunit delta n=1 Tax=Gymnopus luxurians FD-317 M1 TaxID=944289 RepID=A0A0D0C6X4_9AGAR) HSP 1 Score: 85.1 bits (209), Expect = 1.180e-15 Identity = 44/130 (33.85%), Postives = 76/130 (58.46%), Query Frame = 1 Query: 181 ADHVSVESEELLRVKMERDGSVKAMQVNGKLSLLARHVDGSHAQLQLRLGANP---GWQMQPHPQLSKPALADEATLRLKDPSRSFPVGERAGLLRWKLPTGADGAEAPLALVCWPEEVGDGNVVMNIEY 561 A+ + + +E + + + RDG V++M++ G ++LL D +H ++ L ++ Q + HP ++K + E + LKDPSRSFPVG+ +L+W+ TG D + PL++ CWP DG ++IEY Sbjct: 289 AESIHIAVKEQIALSLLRDGGVQSMELKGDMNLLITDSDLAHVKIHLGQSSSDFGNNLQFKQHPNVAKFSPGKERVIALKDPSRSFPVGQSLAVLKWRY-TGTDESNVPLSINCWPTPSNDGTCEVSIEY 417
BLAST of mRNA_M-pyrifera_M_contig105700.1225.1 vs. uniprot
Match: A0A5M6C188_9TREE (Coatomer subunit delta n=1 Tax=Kwoniella shandongensis TaxID=1734106 RepID=A0A5M6C188_9TREE) HSP 1 Score: 84.3 bits (207), Expect = 2.160e-15 Identity = 57/161 (35.40%), Postives = 89/161 (55.28%), Query Frame = 1 Query: 172 AAVADHVSVES-----EELLRVKMERDGSVKAMQVNGKLSLLARHVDGSHAQLQLRLGANPGWQMQ--PHPQLSKPALADEATLRLKDPSRSFPVGERAGLLRWKLPTGADGAEAPLALVCWPEEVGDGNVVMNIEYAFAEPPERSPDATPFSLHNVVVSV 633 A V D V ES +E L V + RDG V++ ++ G L L R D + ++L+L L ++Q HP ++K + + + LKD SRSFPVG+ G+LRW++ T D + PL++ CWP+ GDG + +EY +A+ +L NVV+S+ Sbjct: 281 ADVLDKVEQESIHVTIKEQLAVTLLRDGGVQSFELKGDLDL--RITDPALSKLRLTLAQKDYSELQFKQHPNVAKFTPSGDKIIALKDASRSFPVGQGLGVLRWRM-TSKDESNVPLSITCWPQPRGDGTSDVAVEYEL--------EASHLTLRNVVISI 430
BLAST of mRNA_M-pyrifera_M_contig105700.1225.1 vs. uniprot
Match: A0A1R1YAF1_9FUNG (Coatomer subunit delta n=3 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAF1_9FUNG) HSP 1 Score: 84.3 bits (207), Expect = 2.190e-15 Identity = 48/149 (32.21%), Postives = 77/149 (51.68%), Query Frame = 1 Query: 187 HVSVESEELLRVKMERDGSVKAMQVNGKLSLLARHVDGSHAQLQLRLGANPGWQMQPHPQLSKPALADEATLRLKDPSRSFPVGERAGLLRWKLPTGADGAEAPLALVCWPEEVGDGNVVMNIEYAFAEPPERSPDATPFSLHNVVVSV 633 H++VE E + + RDG ++ M+V G LSL+ D S +++ + Q + HP + K ++ L LK+ SR+FP+ + G+L+W+ G PL + CWP GDGN +NIEY + LH+VV+S+ Sbjct: 303 HITVE--ENISAIVNRDGGLELMEVKGDLSLILSEEDKSTTSIRVLCVQDDSTQYKTHPNIDKKQFSESGLLTLKNQSRTFPLNQPVGVLKWRY-VGQSEDSVPLNINCWPSPTGDGNCEVNIEYEL--------NCNHMDLHDVVISI 440
BLAST of mRNA_M-pyrifera_M_contig105700.1225.1 vs. uniprot
Match: A0A1R0GR69_9FUNG (Coatomer subunit delta n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GR69_9FUNG) HSP 1 Score: 84.0 bits (206), Expect = 2.780e-15 Identity = 48/149 (32.21%), Postives = 77/149 (51.68%), Query Frame = 1 Query: 187 HVSVESEELLRVKMERDGSVKAMQVNGKLSLLARHVDGSHAQLQLRLGANPGWQMQPHPQLSKPALADEATLRLKDPSRSFPVGERAGLLRWKLPTGADGAEAPLALVCWPEEVGDGNVVMNIEYAFAEPPERSPDATPFSLHNVVVSV 633 H+S+E E + + RDG ++ M+V G LSL+ D S +++ + Q + HP + K + L LK+PSR+FP+ + G+L+W+ G PL + CWP GDGN ++IEY + LH+VV+S+ Sbjct: 253 HISIE--EHISAIVNRDGGLEMMEVKGDLSLVLSEEDKSGTSVRVLCLHDDSTQYKTHPNIDKRQFNENGLLALKNPSRTFPINQPVGVLKWRY-VGQSEDSVPLNINCWPSPTGDGNCEVSIEYEL--------NVAHMDLHDVVISI 390 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105700.1225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105700.1225.1 >prot_M-pyrifera_M_contig105700.1225.1 ID=prot_M-pyrifera_M_contig105700.1225.1|Name=mRNA_M-pyrifera_M_contig105700.1225.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=211bp GGGGGGGGGGSGSGMGGDSELLSAMAEEGIAAVGGGGGGGESGAAEASLAback to top mRNA from alignment at M-pyrifera_M_contig105700:2..634- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105700.1225.1 ID=mRNA_M-pyrifera_M_contig105700.1225.1|Name=mRNA_M-pyrifera_M_contig105700.1225.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=633bp|location=Sequence derived from alignment at M-pyrifera_M_contig105700:2..634- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105700:2..634- >mRNA_M-pyrifera_M_contig105700.1225.1 ID=mRNA_M-pyrifera_M_contig105700.1225.1|Name=mRNA_M-pyrifera_M_contig105700.1225.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1266bp|location=Sequence derived from alignment at M-pyrifera_M_contig105700:2..634- (Macrocystis pyrifera P11B4 male)back to top |