mRNA_M-pyrifera_M_contig10568.1218.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10568.1218.1 vs. uniprot
Match: D7FY73_ECTSI (Topoisomerase 6 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY73_ECTSI) HSP 1 Score: 216 bits (549), Expect = 5.990e-64 Identity = 101/108 (93.52%), Postives = 104/108 (96.30%), Query Frame = 1 Query: 1 QYHKSGKHCVEYRRSGEKRWVNMLRTAFYIVERAQPNGGEVKEMEPDPTEGLAPIEKWHYEEDISPEFCVALSLLHRAYGSRVQETGHKTVGHTCVTDRDKVTARQVK 324 QYHKSGKHCVEYRRSGEKRWVNML+TAFYIVERAQP GGEVKEMEPDPTEGLAPIEKWHY EDISPEFC+ALSLLHRAYG RVQETGHKTVGHTCVTDRDKV AR+VK Sbjct: 196 QYHKSGKHCVEYRRSGEKRWVNMLKTAFYIVERAQPTGGEVKEMEPDPTEGLAPIEKWHYHEDISPEFCMALSLLHRAYGCRVQETGHKTVGHTCVTDRDKVAAREVK 303
BLAST of mRNA_M-pyrifera_M_contig10568.1218.1 vs. uniprot
Match: A0A6H5KB73_9PHAE (DOT1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB73_9PHAE) HSP 1 Score: 212 bits (539), Expect = 1.350e-62 Identity = 99/108 (91.67%), Postives = 104/108 (96.30%), Query Frame = 1 Query: 1 QYHKSGKHCVEYRRSGEKRWVNMLRTAFYIVERAQPNGGEVKEMEPDPTEGLAPIEKWHYEEDISPEFCVALSLLHRAYGSRVQETGHKTVGHTCVTDRDKVTARQVK 324 QYHKSGKHCVEYRRSGEKRWVNML++AFYIVERAQP GGEVKEME DPTEGLAPIEKWHYEEDISPEFC+ALSLLHRAYG RVQETGH+TVGHTCVTDRDKV AR+VK Sbjct: 193 QYHKSGKHCVEYRRSGEKRWVNMLKSAFYIVERAQPTGGEVKEMESDPTEGLAPIEKWHYEEDISPEFCMALSLLHRAYGCRVQETGHRTVGHTCVTDRDKVAAREVK 300
BLAST of mRNA_M-pyrifera_M_contig10568.1218.1 vs. uniprot
Match: A0A7S3HRH5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HRH5_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.730e-29 Identity = 58/109 (53.21%), Postives = 77/109 (70.64%), Query Frame = 1 Query: 1 QYHKSGKHCVEYRRSGEKRWVNMLRTAFYIVERAQPNGGEVKEMEPDPTEGLAPIE-KWHYEEDISPEFCVALSLLHRAYGSRVQETGHKTVGHTCVTDRDKVTARQVK 324 Q+HKSGKH VE+R+ EKRW+ M + AFYI+ER G E E + D TEGLAP+E W + EDIS ++ A S+L + YG+ +QETGH T GHTC+TD D++ A+ VK Sbjct: 117 QFHKSGKHYVEFRQVNEKRWLIMKKIAFYILERPASEGKEESEFKEDETEGLAPVEDNWVFCEDISLDYTFAQSVLFKIYGNSIQETGHLTKGHTCLTDADRLNAQYVK 225
BLAST of mRNA_M-pyrifera_M_contig10568.1218.1 vs. uniprot
Match: A0A7S4DH00_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DH00_HETAK) HSP 1 Score: 116 bits (291), Expect = 1.180e-28 Identity = 58/111 (52.25%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 4 YHKSGKHCVEYRRSGEKRWVNMLRTAFYIVERAQPNG----GEVKEMEPDPTEGLAPIEKWHYEEDISPEFCVALSLLHRAYGSRVQETGHKTVGHTCVTDRDKVTARQVK 324 YHKSGKHCVE+ + E+R ML+ AFYI+ER GEVKE E E +AP+E WHY EDI+ E+ A S+L + Y R QETGHKT GH CVT+ D+ A+Q K Sbjct: 115 YHKSGKHCVEFTSNKERRLFKMLKIAFYIIERGSQQSSSGEGEVKEAEDIDMENMAPLEDWHYCEDITIEYAHAQSVLQKVYEGRAQETGHKTAGHLCVTEEDRALAKQSK 225
BLAST of mRNA_M-pyrifera_M_contig10568.1218.1 vs. uniprot
Match: A0A7S3NGR3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NGR3_9STRA) HSP 1 Score: 110 bits (276), Expect = 2.730e-26 Identity = 61/110 (55.45%), Postives = 73/110 (66.36%), Query Frame = 1 Query: 1 QYHK-SGKHCVEYRRSGEKRWVNMLRTAFYIVERAQPNGGEVKEMEPD---PTEGLAPIEKWHYEEDISPEFCVALSLLHRAYGSRVQETGHKTVGHTCVTDRDKVTARQ 318 QYH+ SGKHCVE+R++ +RW+ MLRTAFYIV+R E + EPD T G E W + ED+S + A S LH YGSRVQETGHKTVGHTCVT+ DK A Q Sbjct: 83 QYHRTSGKHCVEFRQTNARRWLVMLRTAFYIVDRCNSTLSE-ETKEPDGIFTTPGKNCTEAWTFAEDLSLLYAKAQSTLHECYGSRVQETGHKTVGHTCVTEEDKRRASQ 191
BLAST of mRNA_M-pyrifera_M_contig10568.1218.1 vs. uniprot
Match: A0A7S3ZW16_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZW16_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.010e-25 Identity = 58/102 (56.86%), Postives = 69/102 (67.65%), Query Frame = 1 Query: 1 QYHKS-GKHCVEYRRSGEKRWVNMLRTAFYIVERAQPNGGEVKEMEPDPTEGLAPIEKWHYEEDISPEFCVALSLLHRAYGSRVQETGHKTVGHTCVTDRDK 303 QYH+S GKHCVE+R SG +RW+ MLRTAFYIV+R + E KE E P A E W + ED+S F A S+LH YG R QETGHKT+GH CVTD D+ Sbjct: 70 QYHRSSGKHCVEFRHSGARRWLLMLRTAFYIVDRGTCDE-ETKEPEGLPVLRNARDEPWTFAEDLSLAFAKAQSVLHDCYGGRTQETGHKTLGHVCVTDDDR 170
BLAST of mRNA_M-pyrifera_M_contig10568.1218.1 vs. uniprot
Match: A0A7S0SP71_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SP71_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.540e-25 Identity = 61/109 (55.96%), Postives = 74/109 (67.89%), Query Frame = 1 Query: 1 QYHKSGKHCVEYRRSGEKRWVNMLRTAFYIVERAQP--NGGEVKEMEPDPTEG-LAPIE-KWHYEEDISPEFCVALSLLHRAYGSRVQETGHKTVGHTCVTDRDKVTAR 315 Q+HKSGKH VE+R GEKRW+NM + AFYIVER Q + E K+ + +G LAPIE W Y ED++ EF SLL + YG+ +QETGHKT GH CVTD DK AR Sbjct: 114 QFHKSGKHFVEFRLVGEKRWLNMKKVAFYIVERPQMLMDHCEFKDDDYGDIDGSLAPIEDNWVYVEDLTLEFAFVQSLLFKIYGASIQETGHKTKGHVCVTDSDKERAR 222
BLAST of mRNA_M-pyrifera_M_contig10568.1218.1 vs. uniprot
Match: A0A8J2WX67_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WX67_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.830e-25 Identity = 58/102 (56.86%), Postives = 69/102 (67.65%), Query Frame = 1 Query: 1 QYHKS-GKHCVEYRRSGEKRWVNMLRTAFYIVERAQPNGGEVKEMEPDPTEGLAPIEKWHYEEDISPEFCVALSLLHRAYGSRVQETGHKTVGHTCVTDRDK 303 QYH+S GKHCVE+R SG +RW+ MLRTAFYIV+R + E KE E P A E W + ED+S F A S+LH YG R QETGHKT+GH CVTD D+ Sbjct: 70 QYHRSSGKHCVEFRHSGARRWLLMLRTAFYIVDRGTCDE-ETKEPEGLPVLRNARDEPWTFAEDLSLAFAKAQSVLHDCYGGRTQETGHKTLGHVCVTDDDR 170
BLAST of mRNA_M-pyrifera_M_contig10568.1218.1 vs. uniprot
Match: A0A7S2SB25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SB25_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.410e-24 Identity = 51/108 (47.22%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 4 YHKSGKHCVEYRRSGEKRWVNMLRTAFYIVER-AQPNGGEVKEMEPDPTEGLAPIEKWHYEEDISPEFCVALSLLHRAYGSRVQETGHKTVGHTCVTDRDKVTARQVK 324 Y K+GKH V ++ S +KR ++ML+TAFYIVER + N E KE D + LAP+EKW++ EDIS E+ A +++HR +G+++ ETGH+TVGH C+++ D+ A++ K Sbjct: 177 YAKNGKHVVHFKLSDQKRGLHMLKTAFYIVERPSDMNSSESKEAHEDSS--LAPVEKWNFCEDISHEYIQAQTVVHRVFGNKIHETGHRTVGHMCLSEEDRQLAKKTK 282
BLAST of mRNA_M-pyrifera_M_contig10568.1218.1 vs. uniprot
Match: A0A6U4GL22_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GL22_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.920e-18 Identity = 46/98 (46.94%), Postives = 61/98 (62.24%), Query Frame = 1 Query: 13 SGKHCVEYRRSGEKRWVNMLRTAFYIVERAQ-PNGGEVKEMEPDPTEGLAPIEKWHYEEDISPEFCVALSLLHRAYGSRVQETGHKTVGHTCVTDRDK 303 SGKH VE+ GE RW+ M +TA Y++ ++ E KE++ + G E + Y EDIS +FC+A S L+ YG RVQETGHKT GH C+T DK Sbjct: 111 SGKHLVEFEGRGEARWMRMSKTALYVIRPSKIKEAQETKEVDGIES-GPRSFEHYDYVEDISEDFCLAQSRLYHIYGRRVQETGHKTSGHVCITMNDK 207 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10568.1218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10568.1218.1 >prot_M-pyrifera_M_contig10568.1218.1 ID=prot_M-pyrifera_M_contig10568.1218.1|Name=mRNA_M-pyrifera_M_contig10568.1218.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp QYHKSGKHCVEYRRSGEKRWVNMLRTAFYIVERAQPNGGEVKEMEPDPTEback to top mRNA from alignment at M-pyrifera_M_contig10568:187..5781- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10568.1218.1 ID=mRNA_M-pyrifera_M_contig10568.1218.1|Name=mRNA_M-pyrifera_M_contig10568.1218.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5595bp|location=Sequence derived from alignment at M-pyrifera_M_contig10568:187..5781- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10568:187..5781- >mRNA_M-pyrifera_M_contig10568.1218.1 ID=mRNA_M-pyrifera_M_contig10568.1218.1|Name=mRNA_M-pyrifera_M_contig10568.1218.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig10568:187..5781- (Macrocystis pyrifera P11B4 male)back to top |