mRNA_M-pyrifera_M_contig105679.1217.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105679.1217.1 vs. uniprot
Match: W7TWG8_9STRA (Nrap protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWG8_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 5.840e-17 Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 1 Query: 25 RGWLWVCVRVHPSNSLRQVLRGPPSSETVKAQAFRALWGPKAELRRFRDGALLESAVW 198 RGW+WV + + P +LR V RGPP+ E KA+ FRA WG KAELRRF+DGA++E+ VW Sbjct: 405 RGWVWVGISIDPMQALRLVDRGPPAEEETKAREFRAFWGQKAELRRFKDGAIVEAVVW 462
BLAST of mRNA_M-pyrifera_M_contig105679.1217.1 vs. uniprot
Match: A0A4D9D5Y6_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5Y6_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 5.870e-17 Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 1 Query: 25 RGWLWVCVRVHPSNSLRQVLRGPPSSETVKAQAFRALWGPKAELRRFRDGALLESAVW 198 RGW+WV + + P +LR V RGPP+ E KA+ FRA WG KAELRRF+DGA++E+ VW Sbjct: 673 RGWVWVGISIDPMQALRLVDRGPPAEEETKAREFRAFWGQKAELRRFKDGAIVEAVVW 730
BLAST of mRNA_M-pyrifera_M_contig105679.1217.1 vs. uniprot
Match: A0A5A8CC89_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CC89_CAFRO) HSP 1 Score: 80.1 bits (196), Expect = 1.330e-15 Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = 1 Query: 37 WVCVRVHPSNSLRQVLRGPPSSE------TVKAQAFRALWGPKAELRRFRDGALLESAVWPHVEGRECGILMRMVTHLLVMH 264 WVC+R+ PS + + +RGP + + A AFRALWGPKA+LRRF+DGA++ESAV+ + + +R+ THLL +H Sbjct: 760 WVCLRLDPSAAFKATVRGPAAGDGSGRRAQQAAAAFRALWGPKAQLRRFKDGAVVESAVFGGPDTHRTAVPLRIATHLLALH 841
BLAST of mRNA_M-pyrifera_M_contig105679.1217.1 vs. uniprot
Match: A0A433DCS4_9FUNG (U3 small nucleolar RNA-associated protein 22 n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DCS4_9FUNG) HSP 1 Score: 74.7 bits (182), Expect = 1.040e-13 Identity = 35/78 (44.87%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 34 LWVCVRVHPSNSLRQVLRGPPSSETVKAQAFRALWGPKAELRRFRDGALLESAVWPHVEGRECGILM-RMVTHLLVMH 264 L + + ++P ++ R V +GPP+ + + AFR LWG KAELRRF+DG++LES VW + E G+++ R V HLL +H Sbjct: 606 LIIGIILNPEHATRLVDQGPPAEDATASAAFRQLWGDKAELRRFKDGSILESVVWDAKDTEERGLIVGRAVQHLLQLH 683
BLAST of mRNA_M-pyrifera_M_contig105679.1217.1 vs. uniprot
Match: A0A8E2F1T6_9PEZI (U3 small nucleolar RNA-associated protein 22 (Fragment) n=1 Tax=Glonium stellatum TaxID=574774 RepID=A0A8E2F1T6_9PEZI) HSP 1 Score: 73.2 bits (178), Expect = 3.580e-13 Identity = 41/92 (44.57%), Postives = 52/92 (56.52%), Query Frame = 1 Query: 1 WEVEDEPP----RGWLWVCVRVHPSNSLRQVLRGPPSSETVKAQAFRALWGPKAELRRFRDGALLESAVWPHVEGRECGILMRMVTHLLVMH 264 W+V P G + V P+N R V GPP+ +A +FR WG KAELRRF+DG++LES VW EG E IL ++V HLL H Sbjct: 532 WQVGSAKPSEDREGRILVGFITDPANVARTVDHGPPAENKKEAASFRQFWGEKAELRRFKDGSILESTVWSLKEGGE-SILGQIVKHLLRRH 622
BLAST of mRNA_M-pyrifera_M_contig105679.1217.1 vs. uniprot
Match: A0A6A5XF76_9PLEO (U3 small nucleolar RNA-associated protein 22 n=1 Tax=Aaosphaeria arxii CBS 175.79 TaxID=1450172 RepID=A0A6A5XF76_9PLEO) HSP 1 Score: 72.8 bits (177), Expect = 4.920e-13 Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 1 Query: 40 VCVRVHPSNSLRQVLRGPPSSETVKAQAFRALWGPKAELRRFRDGALLESAVWPHVEGRECGILMRMVTHLLVMH 264 V + + PSN+ R V GPP+ + A +FR WG KAELRRF+DG++LES VWP IL +++ H+L H Sbjct: 591 VSLAIDPSNAYRSVDHGPPAEDKKAAASFRQFWGEKAELRRFKDGSILESVVWP--VSNNSSILEQIIRHVLDRH 663
BLAST of mRNA_M-pyrifera_M_contig105679.1217.1 vs. uniprot
Match: A0A316VQF0_9BASI (U3 small nucleolar RNA-associated protein 22 n=1 Tax=Ceraceosorus guamensis TaxID=1522189 RepID=A0A316VQF0_9BASI) HSP 1 Score: 72.4 bits (176), Expect = 6.720e-13 Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 1 Query: 1 WEVED-EPPRGWLWVCVRVHPSNSLRQVLRGPPSSETVKAQAFRALWGPKAELRRFRDGALLESAVWPHVEGRECGILMRMVTHLLVMH 264 W ++ P + + + + ++LR V GPP + AQ+F+ WG +ELRRFRDG +LES VWP EGR I ++V H+L H Sbjct: 599 WSIDSPRPSNNTVELALVLDAEHALRLVEHGPPPEDAAAAQSFKQFWGDLSELRRFRDGRILESVVWPAAEGR-ARIPRKIVEHILARH 686
BLAST of mRNA_M-pyrifera_M_contig105679.1217.1 vs. uniprot
Match: A0A433PYU5_9FUNG (U3 small nucleolar RNA-associated protein 22 n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PYU5_9FUNG) HSP 1 Score: 72.0 bits (175), Expect = 9.190e-13 Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 1 Query: 7 VEDEPPRGW---------------LWVCVRVHPSNSLRQVLRGPPSSETVKAQAFRALWGPKAELRRFRDGALLESAVWPHVEGRECGILM-RMVTHLLVMH 264 V+ E PR W L + + ++P +++R V +GPP+ +T + FR LWG KAELRRF+DG++LES VW E +++ R V +LL +H Sbjct: 604 VQQELPRNWAISKPPTFKDLSTATLTIGLILNPEHAVRLVDQGPPAEDTAASNEFRKLWGNKAELRRFKDGSILESVVWDAKGAEERNLIVGRAVQYLLQLH 705
BLAST of mRNA_M-pyrifera_M_contig105679.1217.1 vs. uniprot
Match: A0A0L0D852_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D852_THETB) HSP 1 Score: 71.6 bits (174), Expect = 1.250e-12 Identity = 34/77 (44.16%), Postives = 48/77 (62.34%), Query Frame = 1 Query: 34 LWVCVRVHPSNSLRQVLRGPPSSETVKAQAFRALWGPKAELRRFRDGALLESAVWPHVEGRECGILMRMVTHLLVMH 264 LW+ +R+ P +S+ V GP + A+AFRA WG KAELRRF DG++ E+ VW E + I+ +V HLL +H Sbjct: 494 LWIGLRLAPLHSIGIVDMGPSADSGELAEAFRAFWGAKAELRRFVDGSICEAVVWSKYENHQEAIVGAVVKHLLKLH 570
BLAST of mRNA_M-pyrifera_M_contig105679.1217.1 vs. uniprot
Match: A0A7R9U8W3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8W3_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.710e-12 Identity = 32/77 (41.56%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 34 LWVCVRVHPSNSLRQVLRGPPSSETVKAQAFRALWGPKAELRRFRDGALLESAVWPHVEGRECGILMRMVTHLLVMH 264 LW +R+ + + R V RGP +++ A+AF++LWG KAELRRF+DG+L+E+ VW + +L +V H+L H Sbjct: 658 LWFGLRLDLATAGRHVDRGPDAADREAAKAFQSLWGSKAELRRFKDGSLVETVVWGNNTAPRSAVLREIVEHVLATH 734 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105679.1217.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105679.1217.1 >prot_M-pyrifera_M_contig105679.1217.1 ID=prot_M-pyrifera_M_contig105679.1217.1|Name=mRNA_M-pyrifera_M_contig105679.1217.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=88bp WEVEDEPPRGWLWVCVRVHPSNSLRQVLRGPPSSETVKAQAFRALWGPKAback to top mRNA from alignment at M-pyrifera_M_contig105679:367..630+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105679.1217.1 ID=mRNA_M-pyrifera_M_contig105679.1217.1|Name=mRNA_M-pyrifera_M_contig105679.1217.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=264bp|location=Sequence derived from alignment at M-pyrifera_M_contig105679:367..630+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105679:367..630+ >mRNA_M-pyrifera_M_contig105679.1217.1 ID=mRNA_M-pyrifera_M_contig105679.1217.1|Name=mRNA_M-pyrifera_M_contig105679.1217.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig105679:367..630+ (Macrocystis pyrifera P11B4 male)back to top |