mRNA_M-pyrifera_M_contig105587.1203.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105587.1203.1 vs. uniprot
Match: A0A7C8AJX2_9BACT (EpsI family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C8AJX2_9BACT) HSP 1 Score: 150 bits (379), Expect = 5.450e-43 Identity = 71/153 (46.41%), Postives = 101/153 (66.01%), Query Frame = 1 Query: 1 DATIPESLRQELETNTILMREYVSSNGRPVQLTIVQAGKSRRSLHFPEVCFAGQGWETASKALIPVGVYFVGQGLIVQKGETQEAVLYWFKTGDQSTANYAMNTYFWSRETLMMRNPTSQLIRLSTRIGDGGEDRAFRALSDFASGLVPLLLQ 459 D + E +++ L+T+T+L+R Y +G P+QLTIV AG +RRSLHFP+VC GQGWE + +PVG F Q L+V KG ++AVLYWFKTG++ T +Y +N++ W+R L TS L+RLS IG+ E F L DFA+ P+L++ Sbjct: 53 DQEVEEEVQRMLQTSTVLVRNYAGPDGWPLQLTIVYAGTTRRSLHFPQVCLVGQGWEIREQTTMPVGFSFRAQRLVVVKGAQRQAVLYWFKTGERLTGDYFVNSWHWARNQLFSGAATSALVRLSAPIGNRDESAVFSLLEDFAAKFTPILME 205
BLAST of mRNA_M-pyrifera_M_contig105587.1203.1 vs. uniprot
Match: A0A7Y5C9P7_9BACT (EpsI family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5C9P7_9BACT) HSP 1 Score: 150 bits (379), Expect = 4.160e-40 Identity = 71/153 (46.41%), Postives = 99/153 (64.71%), Query Frame = 1 Query: 1 DATIPESLRQELETNTILMREYVSSNGRPVQLTIVQAGKSRRSLHFPEVCFAGQGWETASKALIPVGVYFVGQGLIVQKGETQEAVLYWFKTGDQSTANYAMNTYFWSRETLMMRNPTSQLIRLSTRIGDGGEDRAFRALSDFASGLVPLLLQ 459 D I E+ R+ LET+ I++R+Y + GR VQL+IV AG +RRSLHFPEVC G GWE + +P+G+ F + L++ K + EAVLYWFKTGD T ++ N W+R + PTS +I+L+T IG GE AF L DFA+ P++L+ Sbjct: 362 DYEIDETTRRILETSAIMIRDYAAPGGRFVQLSIVHAGSTRRSLHFPEVCLVGDGWEIVKQRQVPIGILFSAKQLVLVKADRSEAVLYWFKTGDHVTGDFFRNALEWTRNQITFGEPTSAMIKLATPIGPAGERAAFDTLEDFATKFAPVMLE 514
BLAST of mRNA_M-pyrifera_M_contig105587.1203.1 vs. uniprot
Match: A0A1G1MCR5_9BACT (EpsI family protein n=1 Tax=Omnitrophica WOR_2 bacterium RBG_13_41_10 TaxID=1801849 RepID=A0A1G1MCR5_9BACT) HSP 1 Score: 82.4 bits (202), Expect = 1.650e-16 Identity = 46/140 (32.86%), Postives = 71/140 (50.71%), Query Frame = 1 Query: 34 LETNTILMREYVSSNGRPVQLTIVQAGKSRRSLHFPEVCFAGQGWETASKALIPVGVYFVGQGLIVQKGETQEAVLYWFKTGDQSTANYAMNTYFWSRETLMMRNPTSQLIRLSTRIGDGGEDRAFRALSDFASGLVPLL 453 LET + +R+Y + G V L ++ + +R+ H PEVC G G K+LI V LIV+KG++++ V+YWFK G T Y + + + +IR+ST I D G++ A + F S + PLL Sbjct: 62 LETRNLFIRDYKNKKGDSVYLYVIYSEDNRKVSHPPEVCLMGSGVNILDKSLIDVTDDINANKLIVEKGDSRQLVVYWFKAGKLYTDKYIKQQLKVVVDRMFGKRTAGAMIRVSTDIKDHGQESALNLIRTFCSQIEPLL 201
BLAST of mRNA_M-pyrifera_M_contig105587.1203.1 vs. uniprot
Match: A0A1G1PTK5_9BACT (EpsI family protein n=2 Tax=unclassified Candidatus Omnitrophica TaxID=1047005 RepID=A0A1G1PTK5_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 1.850e-15 Identity = 55/161 (34.16%), Postives = 76/161 (47.20%), Query Frame = 1 Query: 1 DATIPESLRQELETNTILMREYVSSNGRPVQLTIVQAGKSRRSLHFPEVCFAGQGWETASKALIPVGVYFVGQG-------LIVQKGETQEAVLYWFKTGDQSTANYAMNT--YFWSRETLMMRNPTS-QLIRLSTRIGDGGEDRAFRALSDFASGLVPLL 453 D I + + Q LET +LMREY+++ G V L IV +G SR + H PE+C+ G G E K + V G+ L+++ QE YWF G + T NY + + W+ + RNP LIR+S R G A F L PLL Sbjct: 51 DIPITKRVYQILETEDVLMREYINARGEKVDLVIVYSGASRAAFHPPEICYLGDGRELLIKNIETVETGVKGEDSTLRTNRLLMKDKFGQEIAWYWFTVGSKITENYYLQQCYFIWNE---LSRNPAGGSLIRVSARTTSGDPSHADATGKGFIRLLAPLL 208
BLAST of mRNA_M-pyrifera_M_contig105587.1203.1 vs. uniprot
Match: Q39U43_GEOMG (Exopolysaccharide synthesis periplasmic protein I n=3 Tax=Geobacter TaxID=28231 RepID=Q39U43_GEOMG) HSP 1 Score: 58.2 bits (139), Expect = 2.240e-7 Identity = 37/157 (23.57%), Postives = 70/157 (44.59%), Query Frame = 1 Query: 7 TIPESLRQELETNTILMREYVSSNGRPVQLTIVQAGKSRRSLHFPEVCFAGQGWETASKALIPVGVYFVG--------QGLIVQKGETQEAVLYWFKTGDQSTANYAMNTYFWSRETLMMRNPTSQLIRLSTRIG---DGGEDRAFRALSDFASGLV 444 T+ + ++ LET IL R+Y S G V L++V ++ H PE C G G + + ++P+ V G L++ E + Y++ +GD+ T Y+ + ++ + + P+ ++L + D D A R ++ A L Sbjct: 48 TVEDRVKDILETEYILSRDYSSPQGEHVYLSLVYYPDNKIGFHNPESCNTGVGMKVLDERIVPITVTLAGGKQEQIDLNRLVLGYAEPVRVIYYFYLSGDRMTGKYSTFRWEMLQQQMQFKRPSGAQVQLHVPVRGSVDATRDVATRYMNSLAPALT 204
BLAST of mRNA_M-pyrifera_M_contig105587.1203.1 vs. uniprot
Match: UPI001AC3B376 (Uncharacterized protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=UPI001AC3B376) HSP 1 Score: 53.5 bits (127), Expect = 1.100e-5 Identity = 34/156 (21.79%), Postives = 70/156 (44.87%), Query Frame = 1 Query: 10 IPESLRQELETNTILMREYVSSNGRPVQLTIVQAGKSRRSLHFPEVCFAGQGWETASKALIPVGVYFVG--------QGLIVQKGETQEAVLYWFKTGDQSTANYAMNTYFWSRETLMMRNPTSQLIRLSTRIGDGGEDRAFRALSDFASGLVPLL 453 + + +++ L+T IL R+Y S G V L++V ++ H PE C G G + + ++P+ V G L++ E + Y++ +GD+ T Y+ + ++ + + P+ ++L G D ++ + + L P L Sbjct: 49 VEDRVKEILDTEYILSRDYASPQGEHVYLSLVYYPDNKIGFHNPESCNTGVGMKVLEERIVPITVTPAGGKQEQIDLNMLVLGSTEPVRVIYYFYLSGDRMTGKYSNFRWEMLQQQMQFKRPSGAQVQLHVP-ARGNVDSTRDVVTRYMNSLAPAL 203
BLAST of mRNA_M-pyrifera_M_contig105587.1203.1 vs. uniprot
Match: D8F3F7_9DELT (EpsI family protein n=1 Tax=delta proteobacterium NaphS2 TaxID=88274 RepID=D8F3F7_9DELT) HSP 1 Score: 53.9 bits (128), Expect = 1.740e-5 Identity = 45/151 (29.80%), Postives = 72/151 (47.68%), Query Frame = 1 Query: 34 LETNTILMREYVSSNGRPVQLTIVQAGKSRR--SLHFPEVCFAGQGW--ETASKALIPV----GVYFVGQGLIVQKGETQEAVLYWF-KTGDQSTANYAMNTY-FWSRETLMMRNPTSQLIRLSTRIGDG-GEDRAFRALSDFASGLVPLL 453 L+ + ++ Y +GR V L + R+ S+H P C G GW A + + V G + V Q ++QKGE Q+ V YWF + G T Y + Y FW + + + L+RL T + G G ++A L +F ++P+L Sbjct: 365 LDLSDYVIVNYRDPSGREVNLYVAYYESQRKGESIHTPGTCLPGSGWLFRKAGRRNVNVKGKPGGFPVNQA-VMQKGEHQQVVYYWFPQRGRILTNAYELKFYAFW--DAMTRQRTDGALVRLITPVYAGEGPEKAEARLQEFMGEVLPVL 512 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105587.1203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105587.1203.1 >prot_M-pyrifera_M_contig105587.1203.1 ID=prot_M-pyrifera_M_contig105587.1203.1|Name=mRNA_M-pyrifera_M_contig105587.1203.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=157bp DATIPESLRQELETNTILMREYVSSNGRPVQLTIVQAGKSRRSLHFPEVCback to top mRNA from alignment at M-pyrifera_M_contig105587:149..619- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105587.1203.1 ID=mRNA_M-pyrifera_M_contig105587.1203.1|Name=mRNA_M-pyrifera_M_contig105587.1203.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=471bp|location=Sequence derived from alignment at M-pyrifera_M_contig105587:149..619- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105587:149..619- >mRNA_M-pyrifera_M_contig105587.1203.1 ID=mRNA_M-pyrifera_M_contig105587.1203.1|Name=mRNA_M-pyrifera_M_contig105587.1203.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=942bp|location=Sequence derived from alignment at M-pyrifera_M_contig105587:149..619- (Macrocystis pyrifera P11B4 male)back to top |