mRNA_M-pyrifera_M_contig105523.1182.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig105523.1182.1
Unique NamemRNA_M-pyrifera_M_contig105523.1182.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig105523.1182.1 vs. uniprot
Match: A0A0L0HKV3_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HKV3_SPIPD)

HSP 1 Score: 80.1 bits (196), Expect = 3.380e-15
Identity = 40/90 (44.44%), Postives = 58/90 (64.44%), Query Frame = 1
Query:   67 EKEEGGHLSHYWLALALWRQGGTKKSAKNMAHRQLLLCAKAEPSFAPAFARLGTFYAEVDQDKAKAKKCYEKALALDAVNDEAGIALTTM 336
            ++E+  HL   WL    W  G   ++ K  AH   L  AK +P++APAFA LG FYAE++QD+ +A +CY +A+ALDA N++A  AL+ M
Sbjct:  523 KREDAVHLC--WLGKVYWAMGDVYRTDKQFAHANWLGAAKRDPNYAPAFACLGQFYAEIEQDRVRAVRCYTRAVALDAGNEQAAKALSRM 610          
BLAST of mRNA_M-pyrifera_M_contig105523.1182.1 vs. uniprot
Match: A0A4P9WG08_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WG08_9FUNG)

HSP 1 Score: 64.7 bits (156), Expect = 8.410e-10
Identity = 39/104 (37.50%), Postives = 60/104 (57.69%), Query Frame = 1
Query:   25 GDAEKAETLLLKSMEKEEGGHLSHYWLALALWRQGGTKKSAKNMAHRQLLLCAKAEPSFAPAFARLGTFYAEVDQDKAKAKKCYEKALALDAVNDEAGIALTTM 336
            GD + A   L +++  EE   L+H  +   +W  G      K +AH  LL  AK +P+ A AF  LG +Y+ V+QD A+A KCY ++LALD  +++A  +L T+
Sbjct:  131 GDFDAARATLEEALAGEETA-LTHLRVGRVVWGLGD-----KPLAHTHLLRAAKLDPNLALAFTHLGHYYSLVEQDAARAIKCYRRSLALDPADEDASRSLVTL 228          
BLAST of mRNA_M-pyrifera_M_contig105523.1182.1 vs. uniprot
Match: A0A433PK41_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PK41_9FUNG)

HSP 1 Score: 63.9 bits (154), Expect = 1.580e-9
Identity = 38/111 (34.23%), Postives = 64/111 (57.66%), Query Frame = 1
Query:    4 GKVALDGGDAEKAETLLLKSMEKEEGGHLSHYWLALA--LWRQGGTKKSAKNMAHRQLLLCAKAEPSFAPAFARLGTFYAEVDQDKAKAKKCYEKALALDAVNDEAGIALT 330
            G +  + G  ++A   L +++E    G  + Y+L L    W  GG   + K+ A+ Q +  AK +P +A AF  LG +Y  V+QD+++AKKCY+KA +LD  + + G+ L+
Sbjct:  524 GSIECELGHYDQALEYLTQAIEM--WGESAVYYLRLGKVYWAIGGDHITDKSYAYTQFIQAAKLDPHYAGAFTYLGHYYRIVEQDRSRAKKCYQKAFSLDPSDVDTGVQLS 632          
BLAST of mRNA_M-pyrifera_M_contig105523.1182.1 vs. uniprot
Match: UPI00201E76CC (tetratricopeptide repeat protein 37-like n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201E76CC)

HSP 1 Score: 61.6 bits (148), Expect = 1.020e-8
Identity = 39/111 (35.14%), Postives = 54/111 (48.65%), Query Frame = 1
Query:    1 RGKVALDGGDAEKAETLLLKSMEKEEGGHLSHYWLALALWRQGGTK--KSAKNMAHRQLLLCAKAEPSFAPAFARLGTFYAEVDQDKAKAKKCYEKALALDAVNDEAGIAL 327
            RG++    G  ++A T   K  E   G     Y L   LW+   T+     +    +  L  AK +P  +  F  LG FYA V ++  KAK+CY+KA  LD  N+EAG AL
Sbjct:  421 RGRILFHTGQHQEALTRFEKLTEDAPGVSGHQYMLGRVLWQLRDTEGQDGVQERCFKAFLKAAKLDPYNSDIFLYLGHFYATVQKENVKAKRCYQKAYDLDPANEEAGAAL 531          
BLAST of mRNA_M-pyrifera_M_contig105523.1182.1 vs. uniprot
Match: K1R944_CRAGI (Tetratricopeptide repeat protein 37 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1R944_CRAGI)

HSP 1 Score: 60.5 bits (145), Expect = 2.590e-8
Identity = 34/97 (35.05%), Postives = 49/97 (50.52%), Query Frame = 1
Query:   37 KAETLLLKSMEKEEGGHLSHYWLALALWRQGGTKKSAKNMAHRQLLLCAKAEPSFAPAFARLGTFYAEVDQDKAKAKKCYEKALALDAVNDEAGIAL 327
            K+  +  + M+K       H   A +LW    +  +     +  LL  AK +P  +  F  LG FY E+ +DK K K+CY+KA  LD  ND+AG AL
Sbjct:  433 KSAVIFCELMKKVSTSSEYHLMYAKSLWYDKNSLSNNLQTCYTALLKSAKLDPYSSEPFEYLGRFYTEIQKDKGKGKRCYQKAFDLDRNNDKAGEAL 529          
BLAST of mRNA_M-pyrifera_M_contig105523.1182.1 vs. uniprot
Match: A0A8B8E415_CRAVI (tetratricopeptide repeat protein 37-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8E415_CRAVI)

HSP 1 Score: 60.1 bits (144), Expect = 3.540e-8
Identity = 32/108 (29.63%), Postives = 54/108 (50.00%), Query Frame = 1
Query:    4 GKVALDGGDAEKAETLLLKSMEKEEGGHLSHYWLALALWRQGGTKKSAKNMAHRQLLLCAKAEPSFAPAFARLGTFYAEVDQDKAKAKKCYEKALALDAVNDEAGIAL 327
            G +     +  K+  +  + +++       H   A +LW    + ++     H  LL  AK +P  +  F  LG FY+++ +DK KAK+C++KA  LD  N+ AG AL
Sbjct:  422 GHLMFQRAEYSKSAAIFTELIKQTSNNSEHHLMYAKSLWENKSSLQNNLQTCHTALLKSAKLDPYRSEPFEYLGRFYSQIQRDKVKAKRCFQKAFDLDRTNEGAGEAL 529          
BLAST of mRNA_M-pyrifera_M_contig105523.1182.1 vs. uniprot
Match: A0A210PMT7_MIZYE (Tetratricopeptide repeat protein 37 n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PMT7_MIZYE)

HSP 1 Score: 60.1 bits (144), Expect = 3.550e-8
Identity = 36/94 (38.30%), Postives = 52/94 (55.32%), Query Frame = 1
Query:   46 TLLLKSMEKEEGGHLSHYWLALALWRQGGTKKSAKNMAHRQLLLCAKAEPSFAPAFARLGTFYAEVDQDKAKAKKCYEKALALDAVNDEAGIAL 327
            TL L++   E   HL       A+W++  +++SA+  ++   L  AK +P  + AF  LG F  +V  DK KA KCY+K   LD  ND+AG AL
Sbjct:  446 TLALEAAPSESENHLMLGKALWAVWKEDKSRESAEK-SYMSFLKAAKLDPYNSEAFLYLGHFSLDVQHDKVKATKCYQKGFDLDNDNDDAGAAL 538          
BLAST of mRNA_M-pyrifera_M_contig105523.1182.1 vs. uniprot
Match: A0A830BPS5_9LAMI (Tetratricopeptide repeat protein 37 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830BPS5_9LAMI)

HSP 1 Score: 58.5 bits (140), Expect = 1.210e-7
Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 1
Query:   94 HYWLALALWRQGGTKKSAKNMAHRQLLLCAKAEPSFAPAFARLGTFYAEVDQDKAKAKKCYEKALALDAVNDEAGIAL 327
            H+ L + LW +G  ++  +  +   L++ AK  P  A AF  LG +YA V  D  +A KCY++ALAL+  + EAG A+
Sbjct:   32 HFNLGVLLWEKGERRQEMREKSVEHLMIAAKLNPQNAAAFRYLGHYYAHVLPDPQRALKCYQRALALNPDDSEAGEAI 109          
BLAST of mRNA_M-pyrifera_M_contig105523.1182.1 vs. uniprot
Match: A0A8J5GSI1_ZINOF (Uncharacterized protein n=8 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5GSI1_ZINOF)

HSP 1 Score: 57.0 bits (136), Expect = 4.240e-7
Identity = 34/85 (40.00%), Postives = 44/85 (51.76%), Query Frame = 1
Query:   94 HYWLALALWRQGGTK-------KSAKNMAHRQLLLCAKAEPSFAPAFARLGTFYAEVDQDKAKAKKCYEKALALDAVNDEAGIAL 327
            HY L + LW +           K  K  A    L  AK  PS  PAF  LG +Y EV  D  ++ KCY++A+ALD+ + EAG AL
Sbjct:   31 HYDLGMYLWERAEAMELSAEQVKQLKEKAAEHFLASAKLNPSNGPAFRFLGHYYREVSVDAQRSVKCYQRAVALDSNDSEAGDAL 115          
BLAST of mRNA_M-pyrifera_M_contig105523.1182.1 vs. uniprot
Match: A0A2T7NFW0_POMCA (Uncharacterized protein n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NFW0_POMCA)

HSP 1 Score: 56.6 bits (135), Expect = 5.790e-7
Identity = 37/101 (36.63%), Postives = 54/101 (53.47%), Query Frame = 1
Query:   40 AETLLLKSMEKEEGGHLSHYWLALALWRQGGTKKSAK--NMAHRQLLLCAKAEPSFAPAFARLGTFYAEVDQDKAKAKKCYEKALALDAVNDEAGIALTTM 336
            A T L K + ++    L    L  ALW    T ++ +  +     LL  AK +P  +  F  LG FY E+  D+ +A+KCY+KA AL++ N+EAG AL  M
Sbjct:  339 AVTGLEKCVAEDPNNALYLLRLGCALWELRNTSQTDRLQDRCFNLLLKAAKLDPYQSHTFLYLGHFYRELKNDQQRARKCYQKAFALNSNNEEAGAALCDM 439          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105523.1182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A0L0HKV3_SPIPD3.380e-1544.44Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A4P9WG08_9FUNG8.410e-1037.50Uncharacterized protein (Fragment) n=1 Tax=Blyttio... [more]
A0A433PK41_9FUNG1.580e-934.23Uncharacterized protein n=1 Tax=Endogone sp. FLAS-... [more]
UPI00201E76CC1.020e-835.14tetratricopeptide repeat protein 37-like n=2 Tax=H... [more]
K1R944_CRAGI2.590e-835.05Tetratricopeptide repeat protein 37 n=2 Tax=Crasso... [more]
A0A8B8E415_CRAVI3.540e-829.63tetratricopeptide repeat protein 37-like n=1 Tax=C... [more]
A0A210PMT7_MIZYE3.550e-838.30Tetratricopeptide repeat protein 37 n=2 Tax=Mizuho... [more]
A0A830BPS5_9LAMI1.210e-738.46Tetratricopeptide repeat protein 37 n=1 Tax=Phthei... [more]
A0A8J5GSI1_ZINOF4.240e-740.00Uncharacterized protein n=8 Tax=Zingiber officinal... [more]
A0A2T7NFW0_POMCA5.790e-736.63Uncharacterized protein n=1 Tax=Pomacea canalicula... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105523contigM-pyrifera_M_contig105523:5..444 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score81.3
Seed ortholog evalue3.2e-13
Seed eggNOG ortholog109760.SPPG_03271T0
Preferred nameSKI3
KEGG koko:K12600
KEGG Pathwayko03018,map03018
KEGG ModuleM00392
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000288,GO:0000291,GO:0000956,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0032991,GO:0034427,GO:0034641,GO:0034655,GO:0043170,GO:0043928,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0055087,GO:0060255,GO:0065007,GO:0070478,GO:0070481,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575
EggNOG free text desc.antiviral protein
EggNOG OGs38B8M@33154,3NU3G@4751,KOG1127@1,KOG1127@2759
COG Functional cat.A
Best tax levelFungi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019
Exons2
Model size336
Cds size336
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815563.4655426-CDS-M-pyrifera_M_contig105523:4..781622815563.4655426-CDS-M-pyrifera_M_contig105523:4..78Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105523 5..78 -
1692277465.6584194-CDS-M-pyrifera_M_contig105523:4..781692277465.6584194-CDS-M-pyrifera_M_contig105523:4..78Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105523 5..78 -
1622815563.4801848-CDS-M-pyrifera_M_contig105523:182..4441622815563.4801848-CDS-M-pyrifera_M_contig105523:182..444Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105523 183..444 -
1692277465.6711183-CDS-M-pyrifera_M_contig105523:182..4441692277465.6711183-CDS-M-pyrifera_M_contig105523:182..444Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105523 183..444 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105523.1182.1prot_M-pyrifera_M_contig105523.1182.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig105523 5..444 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig105523.1182.1

>prot_M-pyrifera_M_contig105523.1182.1 ID=prot_M-pyrifera_M_contig105523.1182.1|Name=mRNA_M-pyrifera_M_contig105523.1182.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
RGKVALDGGDAEKAETLLLKSMEKEEGGHLSHYWLALALWRQGGTKKSAK
NMAHRQLLLCAKAEPSFAPAFARLGTFYAEVDQDKAKAKKCYEKALALDA
VNDEAGIALTTM
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mRNA from alignment at M-pyrifera_M_contig105523:5..444-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig105523.1182.1 ID=mRNA_M-pyrifera_M_contig105523.1182.1|Name=mRNA_M-pyrifera_M_contig105523.1182.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=440bp|location=Sequence derived from alignment at M-pyrifera_M_contig105523:5..444- (Macrocystis pyrifera P11B4 male)
AGGGGCAAAGTGGCACTGGATGGCGGTGATGCGGAGAAAGCAGAGACTCT CCTGCTCAAGTCCATGGAGAAGGAGGAGGGTGGCCACTTGAGTCACTATT GGCTTGCCCTTGCCCTCTGGCGGCAAGGAGGCACGAAGAAGTCGGCCAAG AACATGGCGCACCGCCAGCTGTTGCTCTGCGCCAAGGCAGAGCCTTCCTT TGCGCCTGCGTTCGCTCGCCTGGGCACCTTCTACGCAGAAGTAGACCAGG ATAAGGCAAAGGGTGCGCCGCCTCAGCTGCAATTCCCCTTTCCCTCTCTC TAACCTCTCACTTTTCTTTCGTACCAAAGCGTTGAGTGGTTACTAATTAT CTGACACGCTGGGCAGCTAAGAAATGCTATGAGAAGGCTCTCGCCCTCGA CGCCGTCAACGATGAGGCAGGTATCGCACTCACTACCATG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig105523:5..444-

>mRNA_M-pyrifera_M_contig105523.1182.1 ID=mRNA_M-pyrifera_M_contig105523.1182.1|Name=mRNA_M-pyrifera_M_contig105523.1182.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig105523:5..444- (Macrocystis pyrifera P11B4 male)
AGGGGCAAAGTGGCACTGGATGGCGGTGATGCGGAGAAAGCAGAGACTCT
CCTGCTCAAGTCCATGGAGAAGGAGGAGGGTGGCCACTTGAGTCACTATT
GGCTTGCCCTTGCCCTCTGGCGGCAAGGAGGCACGAAGAAGTCGGCCAAG
AACATGGCGCACCGCCAGCTGTTGCTCTGCGCCAAGGCAGAGCCTTCCTT
TGCGCCTGCGTTCGCTCGCCTGGGCACCTTCTACGCAGAAGTAGACCAGG
ATAAGGCAAAGGAGGGGCAAAGTGGCACTGGATGGCGGTGATGCGGAGAA
AGCAGAGACTCTCCTGCTCAAGTCCATGGAGAAGGAGGAGGGTGGCCACT
TGAGTCACTATTGGCTTGCCCTTGCCCTCTGGCGGCAAGGAGGCACGAAG
AAGTCGGCCAAGAACATGGCGCACCGCCAGCTGTTGCTCTGCGCCAAGGC
AGAGCCTTCCTTTGCGCCTGCGTTCGCTCGCCTGGGCACCTTCTACGCAG
AAGTAGACCAGGATAAGGCAAAGGCTAAGAAATGCTATGAGAAGGCTCTC
GCCCTCGACGCCGTCAACGATGAGGCAGGTATCGCACTCACTACCATGCT
AAGAAATGCTATGAGAAGGCTCTCGCCCTCGACGCCGTCAACGATGAGGC
AGGTATCGCACTCACTACCATG
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