mRNA_M-pyrifera_M_contig1055.1178.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1055.1178.1 vs. uniprot
Match: D8LNJ2_ECTSI (Hlip n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNJ2_ECTSI) HSP 1 Score: 288 bits (737), Expect = 4.220e-94 Identity = 168/252 (66.67%), Postives = 188/252 (74.60%), Query Frame = 1 Query: 1 MRLSAGIAVGVGYASLAQVSSFAFVPSATSVSTYSAGLAATEQPRGHRNLCSR--RGGLSVAMSAADDESLGGEGEGVKTDDTSSQVATKRKR--GSELDDIMSEVAGRAD-EPVVVPRAIPASSXXXXXXRGAGIAPMSPGPIKADPIPGMDALDVPGKIILDPETLAAQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRAAMFGVTVGMLTELWTGQSIPQQVETFAQLLGLLPLDYDTYFQ 741 MRLSA +A+GVG S+ QVSSFAFVP + S ++ A + Q SR G L VA+SAAD E GE DDTSS VATK KR ELDD++SE+AGR+D EP+V+PR GAGIAPM+PGPIK DPIPGMD D+PGKI+L PE LA QQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGR+AMFG+TVGMLTE WTGQSIPQQ+ETFAQLLGLLPLDYDTYFQ Sbjct: 1 MRLSASVALGVGCVSVVQVSSFAFVPLGATPSGCTSCTAHSSQATSGSGSSSRVRPGRLLVALSAADGEGGSDSGEETADDDTSSAVATKPKRKVNPELDDLVSEMAGRSDDEPIVIPR-------------GAGIAPMAPGPIKPDPIPGMDDDDIPGKIVLPPEVLAEQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRSAMFGITVGMLTEYWTGQSIPQQIETFAQLLGLLPLDYDTYFQ 239
BLAST of mRNA_M-pyrifera_M_contig1055.1178.1 vs. uniprot
Match: A0A836CEG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG8_9STRA) HSP 1 Score: 124 bits (310), Expect = 6.150e-31 Identity = 69/113 (61.06%), Postives = 86/113 (76.11%), Query Frame = 1 Query: 409 GPIKADPIP--GMDALD-VPGKIILDPETLAAQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRAAMFGVTVGMLTELWTGQSIPQQVETFAQLLGLLPLDYDTYF 738 GP AD + G+ A D VPGKI++D TLA QQ LEK A+QLRR+RLD+EAE+A G+ P AE+ NGRAAMF + VG+LTE WTGQS+PQQVET A ++GLLPLDY++ F Sbjct: 55 GPDTADEVEDEGIIADDNVPGKIVVDDATLAQQQIDLEKYARQLRRQRLDREAEEARLLGWTPAAEINNGRAAMFFIVVGILTEYWTGQSMPQQVETMASVMGLLPLDYESMF 167
BLAST of mRNA_M-pyrifera_M_contig1055.1178.1 vs. uniprot
Match: A0A7V5I693_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5I693_9BACT) HSP 1 Score: 84.3 bits (207), Expect = 2.830e-16 Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 454 VPGKIILDPETLAAQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRAAMFGVTVGMLTELWTGQSIPQQVETFAQLLGLL 714 VPG+ L LA Q++ L +A++ + RL KEAE FGFC AE+ NGR AMF GMLTE WTGQ++PQQ+E ++LG++ Sbjct: 56 VPGRYKLSAVELAEQRRALRAVAERYKAARLAKEAESRRVFGFCRNAEVINGRTAMFFFVTGMLTEYWTGQTMPQQIELLLRILGII 142
BLAST of mRNA_M-pyrifera_M_contig1055.1178.1 vs. uniprot
Match: A0A6U3SNU5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SNU5_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 6.750e-16 Identity = 43/92 (46.74%), Postives = 62/92 (67.39%), Query Frame = 1 Query: 451 DVPGKIILDPETLAAQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRAAMFGVTVGMLTELWTGQSIPQQVETFAQLLGLLPLDY 726 DVPGK++L+ LAAQ L K+ ++ R+ERL KE ++A G+ +AE +NGR AMF + VG+LTE WTG +IP Q+E ++ G + DY Sbjct: 88 DVPGKVVLNDVQLAAQVTALSKLEEKWRKERLQKEYDEARLLGWTSQAETYNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFIGPDY 179
BLAST of mRNA_M-pyrifera_M_contig1055.1178.1 vs. uniprot
Match: A0A2V3IG60_9FLOR (Light-harvesting complex-like protein OHP2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG60_9FLOR) HSP 1 Score: 84.0 bits (206), Expect = 7.580e-16 Identity = 43/87 (49.43%), Postives = 62/87 (71.26%), Query Frame = 1 Query: 454 VPGKIILDPETLAAQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRAAMFGVTVGMLTELWTGQSIPQQVETFAQLLGLL 714 VPGKI LD T+A Q+ LE+ +++LR++RL++E E A FG+ P AE NGR AMF + G+LTE WTG ++P+QVE + LG++ Sbjct: 84 VPGKIQLDELTIAKQRTVLEEYSRELRQKRLEEEREAARIFGWVPYAETLNGRLAMFFLVTGLLTEYWTGYTLPEQVELMLRTLGII 170
BLAST of mRNA_M-pyrifera_M_contig1055.1178.1 vs. uniprot
Match: A9BKE1_HEMAN (Hlip n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BKE1_HEMAN) HSP 1 Score: 82.0 bits (201), Expect = 1.480e-15 Identity = 38/89 (42.70%), Postives = 61/89 (68.54%), Query Frame = 1 Query: 448 LDVPGKIILDPETLAAQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRAAMFGVTVGMLTELWTGQSIPQQVETFAQLLGLL 714 L +PGKIIL ++ ++ L+ ++++ ++ER+ KE D FGF +E+ NGR AMF + G+LTE+WTGQ+IP Q+ET + LG++ Sbjct: 43 LKIPGKIILSKTVISERELKLKSLSEKWKKERIAKENFDKKAFGFTKNSEILNGRIAMFFIITGLLTEIWTGQTIPDQIETIIRTLGII 131
BLAST of mRNA_M-pyrifera_M_contig1055.1178.1 vs. uniprot
Match: M1V653_CYAM1 (Similar to high light inducible protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V653_CYAM1) HSP 1 Score: 84.0 bits (206), Expect = 1.680e-15 Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 454 VPGKIILDPETLAAQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRAAMFGVTVGMLTELWTGQSIPQQVETFAQLLGLL 714 VPG+ L LA Q++ L +A++ + RL KEAE FGFC AE+ NGR AMF GMLTE WTGQ++PQQ+E ++LG++ Sbjct: 119 VPGRYKLSAIELAEQRRALRAVAERYKAARLAKEAESRRVFGFCRNAEVINGRTAMFFFVTGMLTEYWTGQTMPQQIELLLRILGII 205
BLAST of mRNA_M-pyrifera_M_contig1055.1178.1 vs. uniprot
Match: A0A7S2A473_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A473_TRICV) HSP 1 Score: 80.9 bits (198), Expect = 1.780e-15 Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = 1 Query: 451 DVPGKIILDPETLAAQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRAAMFGVTVGMLTELWTGQSIPQQVETFAQLLGLLPLDY 726 +VPGKI+L+ LAAQ L + ++ R+ER+ KE ++A G+ RAE +NGR AMF + VG+LTE WTG +IP Q+E ++ G + DY Sbjct: 10 NVPGKIVLNEVELAAQVAALGNLEEKWRKERMQKEYDEARILGWTARAETYNGRFAMFFLVVGLLTEYWTGVTIPGQIEEMLRVGGFIGPDY 101
BLAST of mRNA_M-pyrifera_M_contig1055.1178.1 vs. uniprot
Match: K0TDY7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TDY7_THAOC) HSP 1 Score: 83.2 bits (204), Expect = 1.870e-15 Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 1 Query: 451 DVPGKIILDPETLAAQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRAAMFGVTVGMLTELWTGQSIPQQVETFAQLLGLLPLDY 726 +VPGKI+++ LAAQ L K+ + R+ R D+E EDA GF P+AE++NGRAAMF + VG+LTE W+G SI Q+E A++ G + D+ Sbjct: 90 NVPGKIVVNEVDLAAQVTELTKLEDKYRKIREDQEYEDARIIGFVPKAEMYNGRAAMFFLVVGLLTEYWSGISITGQIEEMARVGGFIGPDF 181
BLAST of mRNA_M-pyrifera_M_contig1055.1178.1 vs. uniprot
Match: A0A7J7IMA7_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMA7_9RHOD) HSP 1 Score: 84.0 bits (206), Expect = 2.350e-15 Identity = 43/94 (45.74%), Postives = 60/94 (63.83%), Query Frame = 1 Query: 436 GMDALD-VPGKIILDPETLAAQQKGLEKIAQQLRRERLDKEAEDAITFGFCPRAELWNGRAAMFGVTVGMLTELWTGQSIPQQVETFAQLLGLL 714 G D L+ PG+ L LA Q++ + +A++ + ER+ +EAE FGFC AE+ NGR AMF GMLTE WTGQ++PQQ+E ++LG L Sbjct: 129 GSDRLERAPGRYKLSAAELAEQRRAIRAVAERYKAERIAREAEARRVFGFCRNAEIINGRTAMFFFATGMLTEYWTGQTMPQQIELLLRILGFL 222 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1055.1178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1055.1178.1 >prot_M-pyrifera_M_contig1055.1178.1 ID=prot_M-pyrifera_M_contig1055.1178.1|Name=mRNA_M-pyrifera_M_contig1055.1178.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=248bp MRLSAGIAVGVGYASLAQVSSFAFVPSATSVSTYSAGLAATEQPRGHRNLback to top mRNA from alignment at M-pyrifera_M_contig1055:20689..25903- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1055.1178.1 ID=mRNA_M-pyrifera_M_contig1055.1178.1|Name=mRNA_M-pyrifera_M_contig1055.1178.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5215bp|location=Sequence derived from alignment at M-pyrifera_M_contig1055:20689..25903- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1055:20689..25903- >mRNA_M-pyrifera_M_contig1055.1178.1 ID=mRNA_M-pyrifera_M_contig1055.1178.1|Name=mRNA_M-pyrifera_M_contig1055.1178.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1488bp|location=Sequence derived from alignment at M-pyrifera_M_contig1055:20689..25903- (Macrocystis pyrifera P11B4 male)back to top |