mRNA_M-pyrifera_M_contig105303.1136.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105303.1136.1 vs. uniprot
Match: A0A7C1UEX9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1UEX9_9ACTN) HSP 1 Score: 155 bits (393), Expect = 8.090e-45 Identity = 83/123 (67.48%), Postives = 91/123 (73.98%), Query Frame = 1 Query: 1 GPPVDPFALALAAPSVLLALLLNVCAQHLFAAAAFWVRDARSAWFIYQKLVFVTGGMLLPLEVLPAALESIARWLPFMAMAYAPARLASGHVEPALLLVQLGWLVVFGAGAALAFHRGQEHLV 369 G P D ALALA P++LLAL N+ AQH FAA AFWV DARS WF+YQKLVFV GGMLLPLEVLP + ++AR LPF AMAY PARLASGH EP LLLVQ WLV G A L F G+ HLV Sbjct: 145 GRPPDAAALALALPALLLALATNLLAQHAFAAIAFWVLDARSTWFLYQKLVFVLGGMLLPLEVLPDPVAAVARLLPFSAMAYVPARLASGHFEPELLLVQAFWLVAIGFVAHLVFRAGERHLV 267
BLAST of mRNA_M-pyrifera_M_contig105303.1136.1 vs. uniprot
Match: A0A538F8Y3_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538F8Y3_9ACTN) HSP 1 Score: 149 bits (376), Expect = 1.320e-43 Identity = 77/122 (63.11%), Postives = 90/122 (73.77%), Query Frame = 1 Query: 1 GPPVDPFALALAAPSVLLALLLNVCAQHLFAAAAFWVRDARSAWFIYQKLVFVTGGMLLPLEVLPAALESIARWLPFMAMAYAPARLASGHVEPALLLVQLGWLVVFGAGAALAFHRGQEHL 366 G P AL +AAPS++LA+ N+ AQH FA AFW+RDARS WF+YQKLVFV G MLLPL+VLP L + A WLPF+AMAYAPARLASGH+EPALL +QLGWLVV A F G+ L Sbjct: 36 GEPPRGAALVMAAPSLVLAVTCNLVAQHAFAGLAFWIRDARSTWFLYQKLVFVLGAMLLPLQVLPGWLHTTAAWLPFVAMAYAPARLASGHLEPALLGMQLGWLVVLAGLAWAVFAAGERRL 157
BLAST of mRNA_M-pyrifera_M_contig105303.1136.1 vs. uniprot
Match: A0A538FJM8_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538FJM8_9ACTN) HSP 1 Score: 147 bits (372), Expect = 8.770e-42 Identity = 73/117 (62.39%), Postives = 88/117 (75.21%), Query Frame = 1 Query: 16 PFALALAAPSVLLALLLNVCAQHLFAAAAFWVRDARSAWFIYQKLVFVTGGMLLPLEVLPAALESIARWLPFMAMAYAPARLASGHVEPALLLVQLGWLVVFGAGAALAFHRGQEHL 366 P A LA PS++LA+ N+ AQH FA AAFW+RDARS WF+YQKLVF+ GGML+PL+VLP L ++A LPFMAMAYAPARLASGH++P LL+VQL WL V AA F G+ L Sbjct: 139 PAAALLAVPSLVLAVACNLAAQHAFAGAAFWIRDARSTWFLYQKLVFILGGMLMPLQVLPGWLHALAGALPFMAMAYAPARLASGHLDPQLLVVQLAWLAVLAGAAAAVFGAGERRL 255
BLAST of mRNA_M-pyrifera_M_contig105303.1136.1 vs. uniprot
Match: UPI0013042E0F (ABC-2 family transporter protein n=2 Tax=unclassified Kineosporia TaxID=2626061 RepID=UPI0013042E0F) HSP 1 Score: 140 bits (353), Expect = 1.070e-38 Identity = 74/122 (60.66%), Postives = 87/122 (71.31%), Query Frame = 1 Query: 1 GPPVDPFALALAAPSVLLALLLNVCAQHLFAAAAFWVRDARSAWFIYQKLVFVTGGMLLPLEVLPAALESIARWLPFMAMAYAPARLASGHVEPALLLVQLGWLVVFGAGAALAFHRGQEHL 366 GPP D LA S+ L +++NV AQH+ A+AAF +RD R+ WF+YQK VF+ GGMLLPLEVLP AL ++A W PFMAMAYAPARLA+G LLLVQ GWLVV A AA F RGQ L Sbjct: 155 GPPPDALHGLLALVSLALGVVVNVAAQHVVASAAFRLRDVRATWFLYQKTVFILGGMLLPLEVLPGALRTLALWCPFMAMAYAPARLATGQGTALLLLVQAGWLVVLVAAAAFVFARGQRRL 276
BLAST of mRNA_M-pyrifera_M_contig105303.1136.1 vs. uniprot
Match: A0A7K0A0I9_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K0A0I9_9ACTN) HSP 1 Score: 137 bits (344), Expect = 1.320e-37 Identity = 68/122 (55.74%), Postives = 86/122 (70.49%), Query Frame = 1 Query: 1 GPPVDPFALALAAPSVLLALLLNVCAQHLFAAAAFWVRDARSAWFIYQKLVFVTGGMLLPLEVLPAALESIARWLPFMAMAYAPARLASGHVEPALLLVQLGWLVVFGAGAALAFHRGQEHL 366 GPP + LA PS++LA+ N+ AQH FA AFW+ DA+SAWF+YQKL+F+ GGMLLPLE+LP A+ AR LPF AM+YAP RL +G+VEP LLL+Q+GWLV A F G+ L Sbjct: 131 GPPPSWNGVGLAIPSLVLAVCCNLAAQHAFAGIAFWLEDAKSAWFLYQKLIFLLGGMLLPLELLPDAMSGAARLLPFWAMSYAPGRLMAGYVEPWLLLLQVGWLVAMVGAAVAVFSSGERRL 252
BLAST of mRNA_M-pyrifera_M_contig105303.1136.1 vs. uniprot
Match: A0A7V9BRA8_9ACTN (ABC-2 family transporter protein n=2 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9BRA8_9ACTN) HSP 1 Score: 134 bits (337), Expect = 1.600e-36 Identity = 68/112 (60.71%), Postives = 82/112 (73.21%), Query Frame = 1 Query: 34 AAPSVLLALLLNVCAQHLFAAAAFWVRDARSAWFIYQKLVFVTGGMLLPLEVLPAALESIARWLPFMAMAYAPARLASGHVEPALLLVQLGWLVVFGAGAALAFHRGQEHLV 369 A P+ LLA+ N+ Q+ FAAAAFWV DA+S WF+YQKL+F+ GGMLLPLE+LP +L IAR LPF AY PARL SGH E LL+VQLGWL+V A A AF G++ LV Sbjct: 145 ALPAALLAVGCNLTMQYSFAAAAFWVEDAKSTWFLYQKLIFLLGGMLLPLELLPESLAGIARLLPFWTTAYVPARLLSGHAEWQLLIVQLGWLIVLVAAALAAFRAGEKRLV 256
BLAST of mRNA_M-pyrifera_M_contig105303.1136.1 vs. uniprot
Match: A0A6L5FXU9_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6L5FXU9_9ACTN) HSP 1 Score: 130 bits (327), Expect = 5.050e-35 Identity = 59/122 (48.36%), Postives = 83/122 (68.03%), Query Frame = 1 Query: 1 GPPVDPFALALAAPSVLLALLLNVCAQHLFAAAAFWVRDARSAWFIYQKLVFVTGGMLLPLEVLPAALESIARWLPFMAMAYAPARLASGHVEPALLLVQLGWLVVFGAGAALAFHRGQEHL 366 GPP A+ LA P++ LA++ N+ +Q+ F AAFW+ DA+ AWF+YQKL+F+ GGML+PLE P A E++A +LPF MAY P RL +GH EP L+++QL W+ V A L F G+ + Sbjct: 134 GPPPSATAVLLALPAMALAVIANMVSQYAFGGAAFWIEDAKGAWFLYQKLIFIVGGMLIPLEFFPGAFETLAHYLPFWTMAYVPGRLMAGHFEPWLIVIQLAWIAVLFPLATLIFRSGERRM 255
BLAST of mRNA_M-pyrifera_M_contig105303.1136.1 vs. uniprot
Match: A0A1K1QU50_9BACL (ABC-2 type transport system permease protein n=1 Tax=Paenibacillus sp. UNCCL117 TaxID=1502764 RepID=A0A1K1QU50_9BACL) HSP 1 Score: 88.2 bits (217), Expect = 1.220e-18 Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 67 NVCAQHLFAAAAFWVRDARSAWFIYQKLVFVTGGMLLPLEVLPAALESIARWLPFMAMAYAPARLASGHVE---PALLLVQLGWLVVFGAGAALAFHRGQEHL 366 N L A AFWV + R F+Y KL+F GGML+PLE+ P L+ I WLPF A+ Y PA+ A + P +L +Q+ WLVV G A L + RG + L Sbjct: 160 NFFLNLLLALCAFWVEETRGLEFVYHKLLFTIGGMLMPLEMFPELLQKICVWLPFQAVLYFPAKAAVQYESSSVPQMLAIQMLWLVVLGLAAVLVYRRGVKKL 262
BLAST of mRNA_M-pyrifera_M_contig105303.1136.1 vs. uniprot
Match: UPI000AF6EEC3 (ABC-2 family transporter protein n=1 Tax=Gorillibacterium timonense TaxID=1689269 RepID=UPI000AF6EEC3) HSP 1 Score: 87.8 bits (216), Expect = 1.760e-18 Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 55 ALLLNVCAQHLFAAAAFWVRDARSAWFIYQKLVFVTGGMLLPLEVLPAALESIARWLPFMAMAYAPARLA---SGHVEPALLLVQLGWLVVFGAGAALAFHRGQEHL 366 A +N + A AAFW+ + R F+Y+KL+F GGM++PLE+ P ++ WLPF + Y PA++A P +L VQLGW++V G A L + +G + L Sbjct: 158 AFTVNFLLNLMLALAAFWIEETRGLEFVYRKLLFTIGGMMMPLEIFPTFFRKLSEWLPFQTVLYFPAKMAVAFDASELPKMLAVQLGWVLVLGVCAVLLYRKGVKKL 264
BLAST of mRNA_M-pyrifera_M_contig105303.1136.1 vs. uniprot
Match: UPI001789218B (ABC-2 family transporter protein n=2 Tax=unclassified Paenibacillus TaxID=185978 RepID=UPI001789218B) HSP 1 Score: 87.8 bits (216), Expect = 2.310e-18 Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 55 ALLLNVCAQHLFAAAAFWVRDARSAWFIYQKLVFVTGGMLLPLEVLPAALESIARWLPFMAMAYAPARLA---SGHVEPALLLVQLGWLVVFGAGAALAFHRG 354 A+ +N A AFWV + R F+Y KL+F GGML+PLE+ P AL+ + RWLPF + Y PAR A S +LL Q W++V GAG AL + G Sbjct: 176 AVTVNFLLNMALALCAFWVEETRGLEFVYHKLLFTIGGMLMPLELFPRALQEVCRWLPFQTVLYVPARTAVRWSDFAIMPMLLTQGIWIIVLGAGVALMYRLG 278 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105303.1136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105303.1136.1 >prot_M-pyrifera_M_contig105303.1136.1 ID=prot_M-pyrifera_M_contig105303.1136.1|Name=mRNA_M-pyrifera_M_contig105303.1136.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=128bp GPPVDPFALALAAPSVLLALLLNVCAQHLFAAAAFWVRDARSAWFIYQKLback to top mRNA from alignment at M-pyrifera_M_contig105303:12..395+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105303.1136.1 ID=mRNA_M-pyrifera_M_contig105303.1136.1|Name=mRNA_M-pyrifera_M_contig105303.1136.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig105303:12..395+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105303:12..395+ >mRNA_M-pyrifera_M_contig105303.1136.1 ID=mRNA_M-pyrifera_M_contig105303.1136.1|Name=mRNA_M-pyrifera_M_contig105303.1136.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig105303:12..395+ (Macrocystis pyrifera P11B4 male)back to top |