mRNA_M-pyrifera_M_contig105103.1098.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105103.1098.1 vs. uniprot
Match: A0A7K1ZEA2_9ACTN (Hydroxymethylglutaryl-CoA synthase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZEA2_9ACTN) HSP 1 Score: 293 bits (749), Expect = 1.470e-94 Identity = 154/212 (72.64%), Postives = 182/212 (85.85%), Query Frame = 1 Query: 1 PAYLEKTNATAIHAALRLEPTIGALDMGGALRSGIGALRTALQGGGTTLVVSADVRDGMATSADEASGGDGAAALLDGDETAGPVIAEYVGAGIATDEFLERWRVPGAERSRVWEERFGEVTYAPLMKAAFETALADAGVEAADIDKLAVAGMHARAIKRGSKAFGAAAEHMIDDLSGTVGNTGTAHPALLLAAALESAGPGELIAVAMLAD 636 PAYLEKTNATAIHAALRL P++GALDMGGALRSGIG LRTAL G GT LVVS+D+RDGMATS+DEA+GGDGAAALL GD+TAG VIAEYVG+G+ATDE LERWR+PGA RSRVWEERFGEV YAPL++ AF ALADAG+ D+D LA+ GMH+RA++R G A + ++DDL+GTVGNTGTAH AL+LA+ALE+AGP E+I + +LAD Sbjct: 73 PAYLEKTNATAIHAALRLAPSVGALDMGGALRSGIGTLRTALTGLGTILVVSSDIRDGMATSSDEAAGGDGAAALLVGDDTAGTVIAEYVGSGVATDEILERWRIPGAPRSRVWEERFGEVAYAPLIQEAFAAALADAGISTDDVDHLALTGMHSRAVQRNRTRLGVATDKIVDDLAGTVGNTGTAHCALMLASALEAAGPNEVIMLVVLAD 284
BLAST of mRNA_M-pyrifera_M_contig105103.1098.1 vs. uniprot
Match: A0A2D6U9M5_9ACTN (Hydroxymethylglutaryl-CoA synthase n=12 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U9M5_9ACTN) HSP 1 Score: 273 bits (698), Expect = 5.910e-87 Identity = 148/212 (69.81%), Postives = 169/212 (79.72%), Query Frame = 1 Query: 1 PAYLEKTNATAIHAALRLEPTIGALDMGGALRSGIGALRTALQGGGTTLVVSADVRDGMATSADEASGGDGAAALLDGDETAGPVIAEYVGAGIATDEFLERWRVPGAERSRVWEERFGEVTYAPLMKAAFETALADAGVEAADIDKLAVAGMHARAIKRGSKAFGAAAEHMIDDLSGTVGNTGTAHPALLLAAALESAGPGELIAVAMLAD 636 PAYLEKTNATA+HAAL+L P +GALD GGALRSG GALRTAL G +TLVV AD R G+ATSADEA+GGDGAAA+L GD+T GPVIAEY+GAGIAT+EFLERWR+PG +RSR WEERFGEVTY PLM A+E ALA + A DIDKL V G H RA+ R +K G E M+DDLSG+VGNTGTAHP L+L + LE A PG+ IAV LAD Sbjct: 72 PAYLEKTNATAVHAALQLSPEVGALDFGGALRSGAGALRTALTAGVSTLVVVADQRGGLATSADEAAGGDGAAAVLIGDDTDGPVIAEYLGAGIATEEFLERWRLPGGDRSRAWEERFGEVTYGPLMSQAWERALAATSLSADDIDKLIVTGTHGRAVARNAKRLGVRDEAMVDDLSGSVGNTGTAHPLLVLTSVLEQASPGKTIAVMTLAD 283
BLAST of mRNA_M-pyrifera_M_contig105103.1098.1 vs. uniprot
Match: A0A6N9EUU2_9ACTN (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EUU2_9ACTN) HSP 1 Score: 234 bits (596), Expect = 1.290e-71 Identity = 129/212 (60.85%), Postives = 156/212 (73.58%), Query Frame = 1 Query: 1 PAYLEKTNATAIHAALRLEPTIGALDMGGALRSGIGALRTALQGGGTTLVVSADVRDGMATSADEASGGDGAAALLDGDETAGPVIAEYVGAGIATDEFLERWRVPGAERSRVWEERFGEVTYAPLMKAAFETALADAGVEAADIDKLAVAGMHARAIKRGSKAFGAAAEHMIDDLSGTVGNTGTAHPALLLAAALESAGPGELIAVAMLAD 636 PAYLEKTNA AIHAALRL+PT+GALD GGA+RSGIGALRTAL G G+TLVV+AD RDG+ T ADEA+ GDGAAA L GD++A PV+AEY+G T E ERWR P RSR WEERFG P A+ ALA++G++ AD+D LA+AG+++RA+ KA G +A ++D L TVGNT AHPALLL +ALE A PGE +AV L D Sbjct: 72 PAYLEKTNAAAIHAALRLDPTVGALDFGGAVRSGIGALRTALAGRGSTLVVAADTRDGLPTGADEAAAGDGAAAALVGDDSAAPVLAEYLGGASRTLEVTERWRTPEGTRSRNWEERFGTHVLGPAAADAWRAALANSGLDGADVDHLALAGLNSRAVASALKAIGVSAGILVDSLLDTVGNTAAAHPALLLCSALEQASPGETVAVVALVD 283
BLAST of mRNA_M-pyrifera_M_contig105103.1098.1 vs. uniprot
Match: A0A6N8YBM3_9ACTN (Hydroxymethylglutaryl-CoA synthase family protein (Fragment) n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N8YBM3_9ACTN) HSP 1 Score: 229 bits (583), Expect = 4.870e-71 Identity = 129/213 (60.56%), Postives = 153/213 (71.83%), Query Frame = 1 Query: 1 PAYLEKTNATAIHAALRLEPTIGALDMGGALRSGIGALRTALQGGGTTLVVSADVRDGMATSADEASGGDGAAALLDGDETAGPVIAEYVGAGIATDEFLERWRVPGAERSRVWEERFGEVTYAPLMKAAFETALADAGVEA-ADIDKLAVAGMHARAIKRGSKAFGAAAEHMIDDLSGTVGNTGTAHPALLLAAALESAGPGELIAVAMLAD 636 PAYLEKTNA AIHAALRL+P + ALD GGA+RSGIGAL AL G G TLVV+AD RDG+ ADEA GDGAAA+L GD T GPV+AEY+G T E ERWR+PG RSR WEERFG P A++ AL +GV+ A ID+LAV G+++RA+ KA GA A+ ++D L TVGNT TAHPALLL +AL+ A PGE+IAV LAD Sbjct: 72 PAYLEKTNAAAIHAALRLDPAVSALDFGGAVRSGIGALHAALAGRGPTLVVAADTRDGLPAGADEAHAGDGAAAVLVGDNTDGPVLAEYLGGASRTLEVTERWRIPGGARSRTWEERFGAHVLGPAAAEAWQAALDGSGVDGTAGIDRLAVTGLNSRAVAAALKAIGAKADSLVDPLINTVGNTATAHPALLLCSALDHAAPGEIIAVVALAD 284
BLAST of mRNA_M-pyrifera_M_contig105103.1098.1 vs. uniprot
Match: A0A6B0WKT6_9ACTN (Hydroxymethylglutaryl-CoA synthase n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WKT6_9ACTN) HSP 1 Score: 232 bits (591), Expect = 8.780e-71 Identity = 132/213 (61.97%), Postives = 157/213 (73.71%), Query Frame = 1 Query: 1 PAYLEKTNATAIHAALRLEPTIGALDMGGALRSGIGALRTALQGGGTTLVVSADVRDGMATSADEASGGDGAAALLDGDETAGPVIAEYVGAGIATDEFLERWRVPGAERSRVWEERFGEVTYAPLMKAAFETALADAGVE-AADIDKLAVAGMHARAIKRGSKAFGAAAEHMIDDLSGTVGNTGTAHPALLLAAALESAGPGELIAVAMLAD 636 PAYLEKTNA AIHAALRL+ + ALD+GGA+RSGIGALR AL G G TLVV+AD RDG+ T ADEAS GDGAAA+L GD++ GPV+AEY+G T E ERWR+PG RSR WEERFG P A++ ALA +G++ AA ID+LAV G+++RA+ KA GA A ++D L TVGNT TAHPALLL +ALE A PGE IAV LAD Sbjct: 72 PAYLEKTNAAAIHAALRLDAAVEALDLGGAVRSGIGALRAALGGKGRTLVVAADTRDGLPTGADEASAGDGAAAVLVGDDSDGPVLAEYLGGASRTLEVTERWRIPGGARSRTWEERFGAHVLGPAAAEAWQAALAGSGIDGAAGIDRLAVTGLNSRAVATALKAIGANAGSLVDPLINTVGNTATAHPALLLCSALEHAAPGETIAVVALAD 284
BLAST of mRNA_M-pyrifera_M_contig105103.1098.1 vs. uniprot
Match: A0A6B1EDI9_9ACTN (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EDI9_9ACTN) HSP 1 Score: 230 bits (586), Expect = 4.900e-70 Identity = 132/213 (61.97%), Postives = 153/213 (71.83%), Query Frame = 1 Query: 1 PAYLEKTNATAIHAALRLEPTIGALDMGGALRSGIGALRTALQGGGTTLVVSADVRDGMATSADEASGGDGAAALLDGDETAGPVIAEYVGAGIATDEFLERWRVPGAERSRVWEERFGEVTYAPLMKAAFETALADAGV-EAADIDKLAVAGMHARAIKRGSKAFGAAAEHMIDDLSGTVGNTGTAHPALLLAAALESAGPGELIAVAMLAD 636 PAYLEKTNA AIHAALRL+P +GALD GGA+RSGIGALRTAL GG TLVV+AD RDG T ADEA+ GDGAAALL GD + GPV+AEY+GA T E ERWR PG RSR WEER G P+ A AL D+G+ + A ID+LAV G+++RA+ KA GA ++D L TVGNT TAHPALLL +ALE A PGE +AV LAD Sbjct: 72 PAYLEKTNAAAIHAALRLDPAVGALDFGGAIRSGIGALRTALAAGGPTLVVAADRRDGPPTGADEAAAGDGAAALLVGDGSDGPVLAEYLGAASRTVEVTERWRTPGEARSRSWEERLGAHVLGPVGAEALHAALVDSGLGDTAGIDRLAVTGLNSRAVAAAVKAIGAEPSSIVDPLIDTVGNTATAHPALLLCSALEQASPGETVAVVALAD 284
BLAST of mRNA_M-pyrifera_M_contig105103.1098.1 vs. uniprot
Match: A0A6G0A989_9ACTN (Hydroxymethylglutaryl-CoA synthase family protein n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A989_9ACTN) HSP 1 Score: 229 bits (584), Expect = 1.100e-69 Identity = 123/214 (57.48%), Postives = 161/214 (75.23%), Query Frame = 1 Query: 1 PAYLEKTNATAIHAALRLEPTIGALDMGGALRSGIGALRTALQGGGTTLVVSADVRDGMATSADEASGGDGAAALLDGDE--TAGPVIAEYVGAGIATDEFLERWRVPGAERSRVWEERFGEVTYAPLMKAAFETALADAGVEAADIDKLAVAGMHARAIKRGSKAFGAAAEHMIDDLSGTVGNTGTAHPALLLAAALESAGPGELIAVAMLAD 636 PAYLEKTNATAIHA LRL+ + A+D G A+R G+GALR AL G TLVV++D+R+G+ T ADE++GGDGAAA L GD+ GPVIAE++GAG AT+EFL+RWR+PG RS+VWEERFGE Y PL + A+ AL A + DID + + G+HARA++ ++ G + ++DDLS TVGNTGTAHP LLLA+AL+ A P E++A+ +LAD Sbjct: 74 PAYLEKTNATAIHAVLRLDTDVAAMDTGAAVRCGVGALRAALSGTEETLVVTSDLRNGLPTGADESAGGDGAAAFLVGDDGDADGPVIAEFLGAGSATEEFLDRWRLPGENRSKVWEERFGETKYLPLAEQAWNGALKQAELGPEDIDAVILTGVHARAVRTAARRLGIDNDKLVDDLSATVGNTGTAHPGLLLASALDKASPAEVVALVVLAD 287
BLAST of mRNA_M-pyrifera_M_contig105103.1098.1 vs. uniprot
Match: A0A6B1C0P8_9ACTN (Hydroxymethylglutaryl-CoA synthase n=6 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1C0P8_9ACTN) HSP 1 Score: 226 bits (576), Expect = 1.190e-68 Identity = 128/212 (60.38%), Postives = 153/212 (72.17%), Query Frame = 1 Query: 1 PAYLEKTNATAIHAALRLEPTIGALDMGGALRSGIGALRTALQGGGTTLVVSADVRDGMATSADEASGGDGAAALLDGDETAGPVIAEYVGAGIATDEFLERWRVPGAERSRVWEERFGEVTYAPLMKAAFETALADAGVEAADIDKLAVAGMHARAIKRGSKAFGAAAEHMIDDLSGTVGNTGTAHPALLLAAALESAGPGELIAVAMLAD 636 PAYLEKTNATAIHAALRL+ ++GALD GGA+RSGIGALRTAL G TLVV+AD+R G+ T ADEA+GGDGAAA + G E GPV+AE +G+ AT+EF++RWR PG+ + WEERFGE Y PL A++ AL AG+ A D+D V G H+RA+KR G A + DDL VGN GTAHP LLLA LE A PG+ IAV MLAD Sbjct: 72 PAYLEKTNATAIHAALRLDSSVGALDFGGAVRSGIGALRTALNAIGPTLVVTADMRGGLPTGADEAAGGDGAAAFMIGTEDDGPVVAELLGSASATEEFVDRWRQPGSPSTSQWEERFGETRYGPLADQAWKEALGAAGIGADDVDVAVVTGSHSRAVKRVVGQLGVA--RVADDLGAVVGNAGTAHPGLLLANELEQAEPGQTIAVVMLAD 281
BLAST of mRNA_M-pyrifera_M_contig105103.1098.1 vs. uniprot
Match: A0A7C4TK58_9ACTN (Hydroxymethylglutaryl-CoA synthase family protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7C4TK58_9ACTN) HSP 1 Score: 223 bits (569), Expect = 1.810e-68 Identity = 125/212 (58.96%), Postives = 152/212 (71.70%), Query Frame = 1 Query: 1 PAYLEKTNATAIHAALRLEPTIGALDMGGALRSGIGALRTALQGGGTTLVVSADVRDGMATSADEASGGDGAAALLDGDETAGPVIAEYVGAGIATDEFLERWRVPGAERSRVWEERFGEVTYAPLMKAAFETALADAGVEAADIDKLAVAGMHARAIKRGSKAFGAAAEHMIDDLSGTVGNTGTAHPALLLAAALESAGPGELIAVAMLAD 636 PAY +KTNAT IHAALR++ I ALD G A RS +GALRTAL GGG +VVSAD+R G SADEA+GGDGAAAL+ GD+ GPV+AEY+G AT+EF+ERWR PG+ S VWEERFGE+ YAPL A++ L AGV +DKL V G+HARA++ + G A E ++DD +GTVGN G A LLL ALE A PG++IAV LAD Sbjct: 125 PAYTDKTNATTIHAALRIDADI-ALDFGAAARSAVGALRTALTGGGCVMVVSADIRTGQPGSADEATGGDGAAALIVGDDDHGPVLAEYLGGASATEEFIERWRTPGSNASGVWEERFGEIQYAPLANDAWKRGLDAAGVAPEQVDKLIVTGLHARAVRTITGRLGVAREAVVDDRTGTVGNVGAAQVGLLLTDALEQASPGQVIAVVSLAD 335
BLAST of mRNA_M-pyrifera_M_contig105103.1098.1 vs. uniprot
Match: A0A8F4FN95_9ACTN (OB-fold domain-containing protein n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4FN95_9ACTN) HSP 1 Score: 224 bits (571), Expect = 7.900e-68 Identity = 125/212 (58.96%), Postives = 155/212 (73.11%), Query Frame = 1 Query: 1 PAYLEKTNATAIHAALRLEPTIGALDMGGALRSGIGALRTALQGGGTTLVVSADVRDGMATSADEASGGDGAAALLDGDETAGPVIAEYVGAGIATDEFLERWRVPGAERSRVWEERFGEVTYAPLMKAAFETALADAGVEAADIDKLAVAGMHARAIKRGSKAFGAAAEHMIDDLSGTVGNTGTAHPALLLAAALESAGPGELIAVAMLAD 636 PAY++KTNATAIHAALRL + A D GGA+RSG+ ALR AL GG LVV+AD+R G+ SADEA+GGD AAALL GD+ GPV+AE +G+G ATDEFL+RWR PG RS+ WEE+FGE++Y PL AF AL AG++AA ID L VAG HARA K + G A + ++DDLS TVGN G A LLL++ALE A PG+++ + LAD Sbjct: 72 PAYVDKTNATAIHAALRLPGDVIAADFGGAIRSGVAALRAALAGGPAALVVTADIRTGLPGSADEAAGGDAAAALLVGDDADGPVVAELLGSGTATDEFLDRWRTPGDVRSKQWEEKFGEMSYLPLGVEAFNAALDAAGIDAAAIDHLVVAGPHARAAKAVVRKLGVAPDKVVDDLSATVGNPGAAQAGLLLSSALERATPGQVVVLLSLAD 283 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105103.1098.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105103.1098.1 >prot_M-pyrifera_M_contig105103.1098.1 ID=prot_M-pyrifera_M_contig105103.1098.1|Name=mRNA_M-pyrifera_M_contig105103.1098.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=212bp PAYLEKTNATAIHAALRLEPTIGALDMGGALRSGIGALRTALQGGGTTLVback to top mRNA from alignment at M-pyrifera_M_contig105103:2..637- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105103.1098.1 ID=mRNA_M-pyrifera_M_contig105103.1098.1|Name=mRNA_M-pyrifera_M_contig105103.1098.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig105103:2..637- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105103:2..637- >mRNA_M-pyrifera_M_contig105103.1098.1 ID=mRNA_M-pyrifera_M_contig105103.1098.1|Name=mRNA_M-pyrifera_M_contig105103.1098.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1272bp|location=Sequence derived from alignment at M-pyrifera_M_contig105103:2..637- (Macrocystis pyrifera P11B4 male)back to top |