mRNA_M-pyrifera_M_contig105083.1093.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig105083.1093.1
Unique NamemRNA_M-pyrifera_M_contig105083.1093.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig105083.1093.1 vs. uniprot
Match: A0A1D1UY16_RAMVA (Uncharacterized protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1UY16_RAMVA)

HSP 1 Score: 110 bits (276), Expect = 4.280e-29
Identity = 54/119 (45.38%), Postives = 80/119 (67.23%), Query Frame = 1
Query:   16 LEDVPDVLIDEKGVFKYILMEASVENEDGENGSKMVVVGHEWAGYHVELLEHYMEEWKPKFPSVKLRCRGGGRIQRDEASGISVYGYSVGFGRADHSITTKILRKQFPDESVGWSNDGY 372
            +++VPDV ID+ G+FKY+L++A+    D +N SK +V G+  A YH  + E   +E K K   +   C GGGRI+R+  + ISVYG+S+G+G+ADH +T  IL+K FP   + WSN+GY
Sbjct:    3 IKEVPDVEIDDSGIFKYVLIKAT----DKDNQSKNIVRGNASAEYHANVFEKTEKELKKK--GISTECLGGGRIERN-GNVISVYGHSIGYGKADHEVTVSILKKAFPSSKLTWSNEGY 114          
BLAST of mRNA_M-pyrifera_M_contig105083.1093.1 vs. uniprot
Match: A0A6J1TM05_FRAOC (14 kDa phosphohistidine phosphatase-like isoform X1 n=2 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1TM05_FRAOC)

HSP 1 Score: 111 bits (278), Expect = 5.180e-29
Identity = 52/125 (41.60%), Postives = 80/125 (64.00%), Query Frame = 1
Query:    1 VLPKELEDVPDVLIDEKGVFKYILMEASVENEDGENGSKMVVVGHEWAGYHVELLEHYMEEWKPKFPSVKLRCRGGGRIQRDEASG-ISVYGYSVGFGRADHSITTKILRKQFPDESVGWSNDGY 372
            V+ + L+ +P VLID +GVFKY+L++   + E  +   K++V G +W  +H ++ E   E  K +    +  C GGGRI+ + A   + VYGYS G+GRADH ITT +++K +PD +V W+NDGY
Sbjct:   23 VMEEILKSIPTVLIDSEGVFKYVLIKVHRKEEVVDEREKLIVRGFKWGAFHADIYEETQE--KIEKLGFETECVGGGRIEHNPAEKKLKVYGYSQGYGRADHEITTNLIKKDYPDYNVSWTNDGY 145          
BLAST of mRNA_M-pyrifera_M_contig105083.1093.1 vs. uniprot
Match: V9LD52_CALMI (14 kDa phosphohistidine phosphatase n=2 Tax=Callorhinchus milii TaxID=7868 RepID=V9LD52_CALMI)

HSP 1 Score: 110 bits (276), Expect = 5.390e-29
Identity = 56/121 (46.28%), Postives = 77/121 (63.64%), Query Frame = 1
Query:   13 ELEDVPDVLIDEKGVFKYILMEASVENEDGENGSKMVVVGHEWAGYHVELLEHYMEEWKPKFPSVKLRCRGGGRIQRD-EASGISVYGYSVGFGRADHSITTKILRKQFPDESVGWSNDGY 372
            EL  VPDV ID  G FKY+L+        G  G K +V G  WA YH ++ +  +++ + K   +K  C+GGGRIQ + +   I+VYGYSVGFGRA H ITT+ L+ ++PD S+ WSN+GY
Sbjct:    5 ELAQVPDVDIDADGTFKYVLVRVC-RTGGGXXGKKDIVRGWSWAEYHGDIFDKVVDQLEKK--GMKCDCKGGGRIQHNSQDKTINVYGYSVGFGRAKHEITTEKLKAKYPDYSISWSNEGY 122          
BLAST of mRNA_M-pyrifera_M_contig105083.1093.1 vs. uniprot
Match: UPI001C4CFD7A (14 kDa phosphohistidine phosphatase n=1 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4CFD7A)

HSP 1 Score: 108 bits (270), Expect = 4.260e-28
Identity = 58/120 (48.33%), Postives = 75/120 (62.50%), Query Frame = 1
Query:   16 LEDVPDVLIDEKGVFKYILMEASVENEDGENGSKMVVVGHEWAGYHVELLEHYMEEWKPKFPSVKLRCRGGGRIQRDE-ASGISVYGYSVGFGRADHSITTKILRKQFPDESVGWSNDGY 372
            L+ VPDV ID  GVFKY+L+  + E   G   SK VV G+ WA YH ++ E   EE +     ++ +C GGGRI     A  I VYGYSVGFGRA HS++T+ L+  FPD  V WS++GY
Sbjct:    7 LDRVPDVDIDPDGVFKYVLIRVTPE---GAGPSKDVVRGYAWAEYHADIFERVAEELERL--GLRCQCLGGGRIDHQSGAKKIRVYGYSVGFGRAKHSVSTEKLKAAFPDYQVSWSDEGY 121          
BLAST of mRNA_M-pyrifera_M_contig105083.1093.1 vs. uniprot
Match: T1EEI7_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EEI7_HELRO)

HSP 1 Score: 107 bits (268), Expect = 7.850e-28
Identity = 56/120 (46.67%), Postives = 78/120 (65.00%), Query Frame = 1
Query:   16 LEDVPDVLIDEKGVFKYILMEASVENEDGENGSKMVVVGHEWAGYHVELLEHYMEEWKPKFPSVKLRCRGGGRIQRDEASG-ISVYGYSVGFGRADHSITTKILRKQFPDESVGWSNDGY 372
            LE VP V ID  GVFKYIL+EAS   +      K++V G + + YH ++LE   ++ K +   ++LRC GGGRI  D  +  I VYGYSVGFG+ADH +T  +L++Q+ D  + +SNDGY
Sbjct:    4 LEKVPVVEIDRDGVFKYILVEASSGGQ-----KKLLVRGDQESPYHADVLEKLEDKLKKENLRMELRCTGGGRIDHDSKNKHIKVYGYSVGFGKADHKVTCNLLKEQYKDYKIDFSNDGY 118          
BLAST of mRNA_M-pyrifera_M_contig105083.1093.1 vs. uniprot
Match: A0A6P8ZRB4_THRPL (14 kDa phosphohistidine phosphatase-like isoform X1 n=2 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8ZRB4_THRPL)

HSP 1 Score: 108 bits (270), Expect = 8.420e-28
Identity = 50/120 (41.67%), Postives = 75/120 (62.50%), Query Frame = 1
Query:   16 LEDVPDVLIDEKGVFKYILMEASVENEDGENGSKMVVVGHEWAGYHVELLEHYMEEWKPKFPSVKLRCRGGGRIQRDEASG-ISVYGYSVGFGRADHSITTKILRKQFPDESVGWSNDGY 372
            L  +P V ID +GVFKY+L++     E   +  K +V G +W  YH ++ E   E  K +    +  C GGGRI+ + +   + VYGYS G+GRADH +TT++L+K++PD +V W+NDGY
Sbjct:   28 LNTIPTVSIDNEGVFKYVLIKVHKTEEGATDSEKFIVRGFKWGPYHADIYEATQE--KIEKLGFETECVGGGRIEHNPSEKKLKVYGYSQGYGRADHEVTTELLKKEYPDYNVSWTNDGY 145          
BLAST of mRNA_M-pyrifera_M_contig105083.1093.1 vs. uniprot
Match: UPI000C04FAC2 (14 kDa phosphohistidine phosphatase-like n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C04FAC2)

HSP 1 Score: 107 bits (268), Expect = 9.600e-28
Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = 1
Query:   13 ELEDVPDVLIDEKGVFKYILMEASVENEDGENGSKMVVVGHEWAGYHVELLEHYMEEWKPKFPSVKLRCRGGGRIQRDEASG-ISVYGYSVGFGRADHSITTKILRKQFPD-ESVGWSNDGY 372
            +L  VPDV ID  G FKY+L++  V +   EN  K +V G +WA YH ++ E   +E      S+K  C GGGRIQ D     I VYGYS+GFGRADHSIT K L+K +PD ES+ +SN+GY
Sbjct:    8 KLLSVPDVDIDADGKFKYVLIK--VVDPSNENAYKCIVRGSDWACYHADIYEKVEKEIGEM--SMKTECLGGGRIQHDRLDKKILVYGYSMGFGRADHSITVKKLKKAYPDYESITFSNEGY 125          
BLAST of mRNA_M-pyrifera_M_contig105083.1093.1 vs. uniprot
Match: UPI001F4F87FD (sex-regulated protein janus-A-like isoform X2 n=4 Tax=Schistocerca americana TaxID=7009 RepID=UPI001F4F87FD)

HSP 1 Score: 108 bits (270), Expect = 1.080e-27
Identity = 57/123 (46.34%), Postives = 80/123 (65.04%), Query Frame = 1
Query:   10 KELEDVPDVLIDEKGVFKYILMEA-SVENEDGENGSKMVVVGHEWAGYHVELLEHYMEEWKPKFPSVKLRCRGGGRIQRD-EASGISVYGYSVGFGRADHSITTKILRKQFPDESVGWSNDGY 372
            ++L  VPDV ID +G FKY+L+     E  DG+  SK+VV G++ AG+H ++ +  M+  + K   V   C GGGRIQ D  A  I VYGYS GFG+ADHS T +IL+  +PD ++ WS++GY
Sbjct:   34 EKLAAVPDVDIDPEGTFKYVLIRVFGPEGPDGKEPSKLVVRGYKRAGFHSDVYDETMD--RVKGLGVDTECTGGGRIQHDPSAKVIKVYGYSQGFGKADHSKTVEILKTAYPDYNITWSDEGY 154          
BLAST of mRNA_M-pyrifera_M_contig105083.1093.1 vs. uniprot
Match: UPI00142597F1 (14 kDa phosphohistidine phosphatase-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142597F1)

HSP 1 Score: 107 bits (266), Expect = 1.620e-27
Identity = 58/122 (47.54%), Postives = 79/122 (64.75%), Query Frame = 1
Query:   13 ELEDVPDVLIDEKGVFKYILMEASVENEDGENGSKMVVVGHEWAGYHVELLEHYMEEWKPKFPSVKLRCRGGGRIQRDEASG-ISVYGYSVGFGRADHSITTKILRKQFPD-ESVGWSNDGY 372
            +L+ V DV ID  G+FKYIL++       GE  SK +V GH WA YH ++ E   EE       +K  C GGGRI+ D  +  I VYGYSVGFG+ADH+IT  +L+K++PD +S+ W+N+GY
Sbjct:    7 DLDCVTDVDIDSDGIFKYILIKIK-----GEGCSKYIVRGHAWAEYHADIYER--EE--KSLGRIKSECVGGGRIKHDSKNKHIVVYGYSVGFGKADHAITVGLLKKKYPDYDSITWNNEGY 119          
BLAST of mRNA_M-pyrifera_M_contig105083.1093.1 vs. uniprot
Match: A0A8C2TWT2_COTJA (14 kDa phosphohistidine phosphatase n=1 Tax=Coturnix japonica TaxID=93934 RepID=A0A8C2TWT2_COTJA)

HSP 1 Score: 107 bits (266), Expect = 1.670e-27
Identity = 54/120 (45.00%), Postives = 75/120 (62.50%), Query Frame = 1
Query:   16 LEDVPDVLIDEKGVFKYILMEASVENEDGENGSKMVVVGHEWAGYHVELLEHYMEEWKPKFPSVKLRCRGGGRIQ-RDEASGISVYGYSVGFGRADHSITTKILRKQFPDESVGWSNDGY 372
            L+ VPDV ID  GVFKY+L+      + G    K VV GH WA YH ++ +    E +P+   +   C GGGRI  R +   I VYGYSVGFGRA+HS+TT+ L+ ++PD  + W+++GY
Sbjct:    5 LQRVPDVEIDAGGVFKYVLLRVRPRGDAGTG--KDVVRGHGWAEYHADIYDRAAAELEPQ--GLDCECLGGGRISHRSQEKKIHVYGYSVGFGRANHSVTTEKLKAKYPDYEITWADEGY 120          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105083.1093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1D1UY16_RAMVA4.280e-2945.38Uncharacterized protein n=1 Tax=Ramazzottius varie... [more]
A0A6J1TM05_FRAOC5.180e-2941.6014 kDa phosphohistidine phosphatase-like isoform X... [more]
V9LD52_CALMI5.390e-2946.2814 kDa phosphohistidine phosphatase n=2 Tax=Callor... [more]
UPI001C4CFD7A4.260e-2848.3314 kDa phosphohistidine phosphatase n=1 Tax=Scelop... [more]
T1EEI7_HELRO7.850e-2846.67Uncharacterized protein n=1 Tax=Helobdella robusta... [more]
A0A6P8ZRB4_THRPL8.420e-2841.6714 kDa phosphohistidine phosphatase-like isoform X... [more]
UPI000C04FAC29.600e-2850.0014 kDa phosphohistidine phosphatase-like n=1 Tax=S... [more]
UPI001F4F87FD1.080e-2746.34sex-regulated protein janus-A-like isoform X2 n=4 ... [more]
UPI00142597F11.620e-2747.5414 kDa phosphohistidine phosphatase-like n=1 Tax=A... [more]
A0A8C2TWT2_COTJA1.670e-2745.0014 kDa phosphohistidine phosphatase n=1 Tax=Coturn... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105083contigM-pyrifera_M_contig105083:137..511 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score105.5
Seed ortholog evalue1.8e-20
Seed eggNOG ortholog6412.HelroP108413
Preferred namePHPT1
KEGG koko:K01112
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0002682,GO:0002683,GO:0002791,GO:0002793,GO:0003006,GO:0003674,GO:0003824,GO:0004721,GO:0005246,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0007548,GO:0008150,GO:0008152,GO:0008200,GO:0009966,GO:0009968,GO:0009987,GO:0010646,GO:0010647,GO:0010648,GO:0010817,GO:0016247,GO:0016248,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0019855,GO:0022414,GO:0023051,GO:0023056,GO:0023057,GO:0032024,GO:0032502,GO:0032879,GO:0032880,GO:0032956,GO:0032970,GO:0033043,GO:0035774,GO:0035971,GO:0036211,GO:0040012,GO:0040017,GO:0042578,GO:0043086,GO:0043170,GO:0043412,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044325,GO:0044424,GO:0044444,GO:0044464,GO:0046883,GO:0046887,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050708,GO:0050714,GO:0050776,GO:0050789,GO:0050790,GO:0050794,GO:0050796,GO:0050854,GO:0050856,GO:0050858,GO:0050860,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051128,GO:0051222,GO:0051223,GO:0051270,GO:0051272,GO:0051338,GO:0051339,GO:0051348,GO:0051350,GO:0051493,GO:0060341,GO:0061178,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0071704,GO:0090087,GO:0090276,GO:0090277,GO:0098772,GO:0099106,GO:0101006,GO:0140096,GO:1901564,GO:1903530,GO:1903532,GO:1904951,GO:2000145,GO:2000147,GO:2000249,GO:2000983,GO:2000984
EggNOG free text desc.peptidyl-histidine dephosphorylation
EggNOG OGs2CUCZ@1,2S4DR@2759,3A611@33154,3BT9Q@33208,3D9EE@33213
EC3.9.1.3
COG Functional cat.S
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size375
Cds size375
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815558.9186456-CDS-M-pyrifera_M_contig105083:136..5111622815558.9186456-CDS-M-pyrifera_M_contig105083:136..511Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105083 137..511 +
1692277463.5092924-CDS-M-pyrifera_M_contig105083:136..5111692277463.5092924-CDS-M-pyrifera_M_contig105083:136..511Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig105083 137..511 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105083.1093.1prot_M-pyrifera_M_contig105083.1093.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig105083 137..511 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig105083.1093.1

>prot_M-pyrifera_M_contig105083.1093.1 ID=prot_M-pyrifera_M_contig105083.1093.1|Name=mRNA_M-pyrifera_M_contig105083.1093.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
VLPKELEDVPDVLIDEKGVFKYILMEASVENEDGENGSKMVVVGHEWAGY
HVELLEHYMEEWKPKFPSVKLRCRGGGRIQRDEASGISVYGYSVGFGRAD
HSITTKILRKQFPDESVGWSNDGY*
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mRNA from alignment at M-pyrifera_M_contig105083:137..511+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig105083.1093.1 ID=mRNA_M-pyrifera_M_contig105083.1093.1|Name=mRNA_M-pyrifera_M_contig105083.1093.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=375bp|location=Sequence derived from alignment at M-pyrifera_M_contig105083:137..511+ (Macrocystis pyrifera P11B4 male)
GTGTTGCCGAAAGAACTGGAAGACGTGCCTGACGTGTTGATTGATGAAAA AGGGGTGTTCAAATACATTTTGATGGAAGCTAGTGTGGAGAATGAAGATG GTGAGAATGGGAGTAAGATGGTGGTGGTGGGACATGAGTGGGCAGGATAC CACGTGGAGTTGTTGGAGCATTACATGGAGGAATGGAAGCCCAAGTTTCC TTCTGTGAAGCTCCGTTGTCGAGGTGGAGGTAGGATTCAGCGTGATGAAG CCTCAGGTATCTCGGTGTATGGCTATTCTGTTGGGTTTGGCAGGGCAGAC CATTCTATCACAACCAAAATCCTTCGAAAGCAATTTCCAGATGAATCCGT TGGCTGGTCCAATGATGGATATTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig105083:137..511+

>mRNA_M-pyrifera_M_contig105083.1093.1 ID=mRNA_M-pyrifera_M_contig105083.1093.1|Name=mRNA_M-pyrifera_M_contig105083.1093.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig105083:137..511+ (Macrocystis pyrifera P11B4 male)
GTGTTGCCGAAAGAACTGGAAGACGTGCCTGACGTGTTGATTGATGAAAA
AGGGGTGTTCAAATACATTTTGATGGAAGCTAGTGTGGAGAATGAAGATG
GTGAGAATGGGAGTAAGATGGTGGTGGTGGGACATGAGTGGGCAGGATAC
CACGTGGAGTTGTTGGAGCATTACATGGAGGAATGGAAGCCCAAGTTTCC
TTCTGTGAAGCTCCGTTGTCGAGGTGGAGGTAGGATTCAGCGTGATGAAG
CCTCAGGTATCTCGGTGTATGGCTATTCTGTTGGGTTTGGCAGGGCAGAC
CATTCTATCACAACCAAAATCCTTCGAAAGCAATTTCCAGATGAATCCGT
TGGCTGGTCCAATGATGGATATTAAGTGTTGCCGAAAGAACTGGAAGACG
TGCCTGACGTGTTGATTGATGAAAAAGGGGTGTTCAAATACATTTTGATG
GAAGCTAGTGTGGAGAATGAAGATGGTGAGAATGGGAGTAAGATGGTGGT
GGTGGGACATGAGTGGGCAGGATACCACGTGGAGTTGTTGGAGCATTACA
TGGAGGAATGGAAGCCCAAGTTTCCTTCTGTGAAGCTCCGTTGTCGAGGT
GGAGGTAGGATTCAGCGTGATGAAGCCTCAGGTATCTCGGTGTATGGCTA
TTCTGTTGGGTTTGGCAGGGCAGACCATTCTATCACAACCAAAATCCTTC
GAAAGCAATTTCCAGATGAATCCGTTGGCTGGTCCAATGATGGATATTAA
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