mRNA_M-pyrifera_M_contig105059.1086.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105059.1086.1 vs. uniprot
Match: A0A6H5JCR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR2_9PHAE) HSP 1 Score: 135 bits (341), Expect = 5.210e-34 Identity = 70/143 (48.95%), Postives = 98/143 (68.53%), Query Frame = 1 Query: 37 LSEAEEDELAGLLRHAELSRVHVRKVMEFALNKAAAAAEVVRALAASLTLESTPAPRKLARLYALSDVLYNSGASVSNASNYRALLQKHLPEVFESLRSCFHTIQGRATSSRMRDRVMRVLAAWDDWSLFPPLYTSGLAATFL 465 LS+ + D + LLR SR V++ M FAL+ A A+A+VV L SL + TP K+ARLY LSD+L+NS A V AS+YR LQK LPE+F+ L F ++GR T+ ++ DR+M +LAAWD+WS++PPLY +GL A+F+ Sbjct: 637 LSDKDFDAFSALLRGLTNSRAKVKEAMGFALDHADASADVVGVLKESLLVPETPIHVKIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDRIMALLAAWDNWSIYPPLYITGLEASFM 779
BLAST of mRNA_M-pyrifera_M_contig105059.1086.1 vs. uniprot
Match: A0A7S3UX26_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX26_HETAK) HSP 1 Score: 128 bits (322), Expect = 8.500e-32 Identity = 73/152 (48.03%), Postives = 103/152 (67.76%), Query Frame = 1 Query: 13 RGRGGGLALSEAEEDELAGLLRHAELSRVHVRKVMEFALNKAAAAAEVVRALAASLTLESTPAPRKLARLYALSDVLYNSGASVSNASNYRALLQKHLPEVFESLRSCFHT--IQGRATSSRMRDRVMRVLAAWDDWSLFPPLYTSGLAATF 462 RGR AL++ E D+L+ +LR SR +++ M FAL+ A A+ EVV+ LA SL L++TPAP K+ARL+ LSD+L+NS A V +A++YR LQ LP+VF++LR +GR ++ +VMRVL W+ WSL+PPL+ SGL ATF Sbjct: 326 RGRAAKTALTDDEYDQLSDMLRGLTNSRRKIKEAMGFALDHADASEEVVQLLAESLGLKATPAPVKVARLHLLSDILHNSSAPVRHAASYRTRLQDALPQVFDALRLAREAEEAKGRMSAQSFESKVMRVLGVWEGWSLYPPLFISGLEATF 477
BLAST of mRNA_M-pyrifera_M_contig105059.1086.1 vs. uniprot
Match: L8HJJ2_ACACA (RNA recognition motif domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJJ2_ACACA) HSP 1 Score: 125 bits (315), Expect = 1.580e-30 Identity = 66/154 (42.86%), Postives = 99/154 (64.29%), Query Frame = 1 Query: 10 RRGRGGGLALSEAEEDELAGLLRHAELSRVHVRKVMEFALNKAAAAAEVVRALAASLTLESTPAPRKLARLYALSDVLYNSGASVSNASNYRALLQKHLPEVFESLRSCFHTIQGRATSSRMRDRVMRVLAAWDDWSLFPPLYTSGLAATFLCP 471 R+G+G L+E + D+ LLR R +R VM FA++ + AA E+V+ L +LTL+ TP P K+ARL+ +SD+L+NS A+V NA YR+L QK LP VFES + GR ++ +++++VMRVL W+ WS++P + + L TFL P Sbjct: 737 RKGKG----LTEEQRDDFEDLLRGLTTHRQRIRDVMGFAIDNSEAAGEIVQVLTEALTLDETPIPTKIARLFLVSDILHNSTAAVRNAHAYRSLFQKQLPNVFESFSTALRNASGRMSAEQLKEQVMRVLRVWEAWSVYPQPFLTTLHETFLRP 886
BLAST of mRNA_M-pyrifera_M_contig105059.1086.1 vs. uniprot
Match: A0A7S2WJA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJA8_9STRA) HSP 1 Score: 125 bits (313), Expect = 2.710e-30 Identity = 70/150 (46.67%), Postives = 96/150 (64.00%), Query Frame = 1 Query: 19 RGGGLALSEAEEDELAGLLRHAELSRVHVRKVMEFALNKAAAAAEVVRALAASLTLESTPAPRKLARLYALSDVLYNSGASVSNASNYRALLQKHLPEVFESLRSCFHTIQ--GRATSSRMRDRVMRVLAAWDDWSLFPPLYTSGLAATF 462 RGGG +L+ E DEL L+ SR +++ M FAL+ A A+ EVV+ L SL L TP KLARLY LSD+L+NS A V +AS YR LLQ LP++FE L F ++ GR ++ + ++V+ +L W+ WSL+PP Y +GL ATF Sbjct: 521 RGGGGSLANHEYDELQDRLQTLSTSRQTIKEAMGFALDHAEASQEVVKLLKESLLLGETPISVKLARLYLLSDILHNSSAPVQHASTYRTLLQACLPQIFEHLNRIFRDVERLGRMSARSLEEKVLALLGVWEQWSLYPPTYITGLEATF 670
BLAST of mRNA_M-pyrifera_M_contig105059.1086.1 vs. uniprot
Match: A0A7S2WJ81_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJ81_9STRA) HSP 1 Score: 125 bits (313), Expect = 2.930e-30 Identity = 70/150 (46.67%), Postives = 96/150 (64.00%), Query Frame = 1 Query: 19 RGGGLALSEAEEDELAGLLRHAELSRVHVRKVMEFALNKAAAAAEVVRALAASLTLESTPAPRKLARLYALSDVLYNSGASVSNASNYRALLQKHLPEVFESLRSCFHTIQ--GRATSSRMRDRVMRVLAAWDDWSLFPPLYTSGLAATF 462 RGGG +L+ E DEL L+ SR +++ M FAL+ A A+ EVV+ L SL L TP KLARLY LSD+L+NS A V +AS YR LLQ LP++FE L F ++ GR ++ + ++V+ +L W+ WSL+PP Y +GL ATF Sbjct: 521 RGGGGSLANHEYDELQDRLQTLSTSRQTIKEAMGFALDHAEASQEVVKLLKESLLLGETPISVKLARLYLLSDILHNSSAPVQHASTYRTLLQACLPQIFEHLNRIFRDVERLGRMSARSLEEKVLALLGVWEQWSLYPPTYITGLEATF 670
BLAST of mRNA_M-pyrifera_M_contig105059.1086.1 vs. uniprot
Match: A0A7S0LSB7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LSB7_9EUKA) HSP 1 Score: 115 bits (288), Expect = 1.830e-29 Identity = 58/134 (43.28%), Postives = 88/134 (65.67%), Query Frame = 1 Query: 28 GLALSEAEEDELAGLLRHAELSRVHVRKVMEFALNKAAAAAEVVRALAASLTLESTPAPRKLARLYALSDVLYNSGASVSNASNYRALLQKHLPEVFESLRSCFHTIQGRATSSRMRDRVMRVLAAWDDWSLFP 429 G L+E E D+L +LR + R +++ M F ++KAAA+ E+V + +L+L TP P+K+ARL+ +SD+L+NS A+V NAS+YR+ Q LP +F SL +C+ I R M+D+V++VL W WSLFP Sbjct: 19 GRELTEDERDDLEDMLRSLVVERAIIKECMGFCISKAAASGEIVETITEALSLSETPVPKKIARLFLVSDILHNSSAAVPNASSYRSHFQNSLPAIFLSLHACYKKITTRMGIETMKDQVVKVLHIWQAWSLFP 152
BLAST of mRNA_M-pyrifera_M_contig105059.1086.1 vs. uniprot
Match: A0A7S2P5M8_BIGNA (Hypothetical protein (Fragment) n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A7S2P5M8_BIGNA) HSP 1 Score: 112 bits (279), Expect = 5.450e-28 Identity = 60/137 (43.80%), Postives = 84/137 (61.31%), Query Frame = 1 Query: 19 RGGGLALSEAEEDELAGLLRHAELSRVHVRKVMEFALNKAAAAAEVVRALAASLTLESTPAPRKLARLYALSDVLYNSGASVSNASNYRALLQKHLPEVFESLRSCFHTIQGRATSSRMRDRVMRVLAAWDDWSLFP 429 RG L E DE LR L++ + M FAL+ A A E+V + SL+L+ TP P+K+ARL+ +SD+LYNS A V NAS YR + LP++FE L + +I+GR T++ MR+RV +VL W WSL+P Sbjct: 65 RGSSRRLRSRERDEFEDRLRGLSLNKTKIAYGMGFALDHAEEAKEIVEIITESLSLDETPIPKKVARLFLVSDILYNSTAPVRNASAYRTEFRDKLPKIFECLHRTYKSIEGRITANAMRERVTKVLRVWQGWSLYP 201
BLAST of mRNA_M-pyrifera_M_contig105059.1086.1 vs. uniprot
Match: A0A7S0ITC6_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0ITC6_9EUKA) HSP 1 Score: 116 bits (291), Expect = 2.690e-27 Identity = 58/134 (43.28%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 28 GLALSEAEEDELAGLLRHAELSRVHVRKVMEFALNKAAAAAEVVRALAASLTLESTPAPRKLARLYALSDVLYNSGASVSNASNYRALLQKHLPEVFESLRSCFHTIQGRATSSRMRDRVMRVLAAWDDWSLFP 429 G L+E E D+L +LR + R +++ M F ++KAAA+ E+V + +L+L TP P+K+ARL+ +SDVL+NS A+V NAS+YR+ Q LP +F SL C+ I R M+++V++VL W WSLFP Sbjct: 522 GRELTEDERDDLEDMLRSLVVERASIKECMGFCISKAAASGEIVETITEALSLSETPVPKKIARLFLVSDVLHNSSAAVPNASSYRSHFQGELPAIFSSLHECYKNITSRMGIETMKEQVVKVLHIWQAWSLFP 655
BLAST of mRNA_M-pyrifera_M_contig105059.1086.1 vs. uniprot
Match: A0A3B3H4L3_ORYLA (U2 snRNP associated SURP domain containing n=123 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3B3H4L3_ORYLA) HSP 1 Score: 116 bits (290), Expect = 3.640e-27 Identity = 64/143 (44.76%), Postives = 84/143 (58.74%), Query Frame = 1 Query: 37 LSEAEEDELAGLLRHAELSRVHVRKVMEFALNKAAAAAEVVRALAASLTLESTPAPRKLARLYALSDVLYNSGASVSNASNYRALLQKHLPEVFESLRSCFHTIQGRATSSRMRDRVMRVLAAWDDWSLFPPLYTSGLAATFL 465 L E E D+L +LR R V + M F LN A AA E+V +A SL++ TP P+K+ARLY +SDVLYNS A VSNAS YR + L ++F L + + TIQG S + RVM AW+DW+++P Y L FL Sbjct: 468 LKEDERDKLEEMLRGLSPKRGDVAEAMLFCLNHAEAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLYNSSAKVSNASYYRKYFETKLCQIFSDLNATYKTIQGHLQSENFKQRVMSCFRAWEDWAVYPDPYLIKLQNIFL 610
BLAST of mRNA_M-pyrifera_M_contig105059.1086.1 vs. uniprot
Match: A0A3P9HS90_ORYLA (U2 snRNP-associated SURP domain containing n=6 Tax=Oryzias TaxID=8089 RepID=A0A3P9HS90_ORYLA) HSP 1 Score: 116 bits (290), Expect = 3.640e-27 Identity = 64/143 (44.76%), Postives = 84/143 (58.74%), Query Frame = 1 Query: 37 LSEAEEDELAGLLRHAELSRVHVRKVMEFALNKAAAAAEVVRALAASLTLESTPAPRKLARLYALSDVLYNSGASVSNASNYRALLQKHLPEVFESLRSCFHTIQGRATSSRMRDRVMRVLAAWDDWSLFPPLYTSGLAATFL 465 L E E D+L +LR R V + M F LN A AA E+V +A SL++ TP P+K+ARLY +SDVLYNS A VSNAS YR + L ++F L + + TIQG S + RVM AW+DW+++P Y L FL Sbjct: 468 LKEDERDKLEEMLRGLSPKRGDVAEAMLFCLNHAEAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLYNSSAKVSNASYYRKYFETKLCQIFSDLNATYKTIQGHLQSENFKQRVMSCFRAWEDWAVYPDPYLIKLQNIFL 610 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105059.1086.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105059.1086.1 >prot_M-pyrifera_M_contig105059.1086.1 ID=prot_M-pyrifera_M_contig105059.1086.1|Name=mRNA_M-pyrifera_M_contig105059.1086.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=157bp AASRRGRGGGLALSEAEEDELAGLLRHAELSRVHVRKVMEFALNKAAAAAback to top mRNA from alignment at M-pyrifera_M_contig105059:5..540- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105059.1086.1 ID=mRNA_M-pyrifera_M_contig105059.1086.1|Name=mRNA_M-pyrifera_M_contig105059.1086.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=536bp|location=Sequence derived from alignment at M-pyrifera_M_contig105059:5..540- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105059:5..540- >mRNA_M-pyrifera_M_contig105059.1086.1 ID=mRNA_M-pyrifera_M_contig105059.1086.1|Name=mRNA_M-pyrifera_M_contig105059.1086.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=942bp|location=Sequence derived from alignment at M-pyrifera_M_contig105059:5..540- (Macrocystis pyrifera P11B4 male)back to top |