mRNA_M-pyrifera_M_contig105058.1085.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig105058.1085.1 vs. uniprot
Match: A0A7Y2II31_9ACTN (MFS transporter n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2II31_9ACTN) HSP 1 Score: 100 bits (250), Expect = 4.170e-22 Identity = 66/156 (42.31%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 19 VTIAATADPVFEANRTALIVDLVPEDDYPSAIQVAGAINQAAQLAGFASGGLLAALLGASGALALNGVTFLFSALLLSQIRTRTETQRSGSKPKLSHAYRFLANDRVSMIAVATTFVTVACAMAIESQAVVYGGDIVDLSDAGTGLLAAVVPAATL 486 V + A DPV+EANR+AL+VD+ +D+Y A + ++NQA+ L G+A GG+L A +G G L N +F+ SA+ + I +++R L A RFL +DRVS+IA+ TT M IE+QA V+G + L+D G+LAA+VPA TL Sbjct: 107 VALVAVIDPVWEANRSALLVDVASDDEYAPAQKFVTSVNQASTLVGWALGGVLVAAVGTVGTLWFNAGSFVVSAMFVGGISVPKDSERPHRSGSLRAAVRFLRSDRVSLIAIVTTVGLTIPGMGIETQAPVFGRE-AGLADQWIGVLAAMVPAVTL 261
BLAST of mRNA_M-pyrifera_M_contig105058.1085.1 vs. uniprot
Match: A0A3N5KCK1_9ACTN (MFS transporter (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3N5KCK1_9ACTN) HSP 1 Score: 60.5 bits (145), Expect = 8.330e-8 Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 1 Query: 67 ALIVDLVPEDDYPSAIQVAGAINQAAQLAGFASGGLLAALLGASGALALNGVTFLFSALLLSQIRTRTETQRSGSKPKLSHAYRFLANDRVSMIAVATTFVTVACAMAIESQAVVYGGDIVDLSDAGTGLLAAVVP 474 AL+ + VP + YP A+ +A ++Q +AG+ GG+L AL+G GAL +N ++F+ SALLL+++ S+ L + D ++ AV A+ ES A VY + + D G G+LAA VP Sbjct: 1 ALLPETVPPNQYPDALALATIVSQVTTVAGYLLGGVLVALIGTRGALVVNALSFVASALLLTRLEVGRTPASKSSRITLRQGASAIYRDVMTRRAVLFFASVNLGAIIPESLATVYALEHLRSGDLGPGILAAAVP 136
BLAST of mRNA_M-pyrifera_M_contig105058.1085.1 vs. uniprot
Match: A0A7G8WG87_9ACTN (MFS transporter n=1 Tax=Nakamurella sp. PAMC28650 TaxID=2762325 RepID=A0A7G8WG87_9ACTN) HSP 1 Score: 58.2 bits (139), Expect = 6.460e-7 Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 1 Query: 49 FEANRTALIVDLVPEDDYPSAIQVAGAINQAAQLAGFASGGLLAALLGASGALALNGVTFLFSALLL 249 ++A +AL+VD++P+ DYP + + A +QAAQLAGFA GGL A +G ALA++ TFL SA+++ Sbjct: 134 WKAAESALVVDILPKSDYPMGLGLRSATSQAAQLAGFAVGGLAVAAIGPRTALAVDAATFLVSAVVI 200
BLAST of mRNA_M-pyrifera_M_contig105058.1085.1 vs. uniprot
Match: A0A3A3YTL6_9ACTN (MFS transporter n=2 Tax=Vallicoccus soli TaxID=2339232 RepID=A0A3A3YTL6_9ACTN) HSP 1 Score: 58.2 bits (139), Expect = 6.530e-7 Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 1 Query: 7 LVIVVTIAATADPVFEANRTALIVDLVPEDDYPSAIQVAGAINQAAQLAGFASGGLLAALLGASGALALNGVTFLFSALLL 249 L++++ +A P F A R A + D++P D Y V Q AQ AGFA GGLL A+LGA GALAL+ VTFL SA L+ Sbjct: 129 LLLLLLLAELCAPPFAAARAAALPDVLPGDRYVVGSAVTTVTTQVAQAAGFALGGLLVAVLGARGALALDAVTFLASAALV 209
BLAST of mRNA_M-pyrifera_M_contig105058.1085.1 vs. uniprot
Match: A0A640UR74_9ACTN (MFS transporter n=1 Tax=Streptomyces tubercidicus TaxID=47759 RepID=A0A640UR74_9ACTN) HSP 1 Score: 57.8 bits (138), Expect = 8.930e-7 Identity = 56/157 (35.67%), Postives = 83/157 (52.87%), Query Frame = 1 Query: 25 IAATADPVFEANRTALIVDLVPEDD-YPSAIQVAGAINQAAQLAGFASGGLLAALLGASGALALNGVTFLFSALLLSQIRTRTETQRSGSKPK------LSHAYRFLANDRVSMIAVATTFVTVACAMAIESQAVVYGGDIVDLSDAGTGLLAAVVP 474 + A PVF R A + +++ E + + V +NQ+AQLAGFA+GGLL A++ LAL VTFL SALLL ++ TR R+G + + L R LA+ RV + + T++ A + E+ V Y G ++ AG GLL +P Sbjct: 163 VLAAIAPVFAGTRAATLGEILGEGELFVLGRSVIRIVNQSAQLAGFAAGGLLLAVVSPRAVLALTAVTFLGSALLL-RLGTRARPARNGVRGEALLGASLGGVRRLLADRRVRALLL-LTWLPPAFVVIPEALLVPYAG-LLGTGPAGAGLLMCAMP 316
BLAST of mRNA_M-pyrifera_M_contig105058.1085.1 vs. uniprot
Match: UPI001FE9BFBF (MFS transporter n=1 Tax=Kribbella qitaiheensis TaxID=1544730 RepID=UPI001FE9BFBF) HSP 1 Score: 57.0 bits (136), Expect = 1.480e-6 Identity = 60/168 (35.71%), Postives = 85/168 (50.60%), Query Frame = 1 Query: 10 VIVVTIAATADPVFEANRTALIVDLVPEDDYPSAIQVAGAINQAAQLAGFASGGLLAALLGASGALALNGVTFLFSALLLSQ-IRTRTETQRSGSKPK------LSHAYRFLANDR-----VSMIAVATTFVTVACAMAIESQAVVYGGDIVDLSDAGTGLLAAVVPA 477 V+++ + A P F++ RTAL+ ++ D Y +A V+ QAAQLAGF +GG + A LGAS ALALN +F SA+LL + R GS + LS R + NDR ++I V ++TV +A A V GG + G+L A PA Sbjct: 117 VLLIAVQLLAAP-FQSARTALMATIMTGDKYKAATGVSAITGQAAQLAGFVTGGTIVAALGASQALALNAASFAISAVLLQLGVGERPVPSGDGSAGRPSWWGSLSAGARLVWNDRRLRYLTALICVPGFYITVE-GLAAPYAASVGGGPV------AVGILFAANPA 276
BLAST of mRNA_M-pyrifera_M_contig105058.1085.1 vs. uniprot
Match: A0A2B8AS87_9ACTN (MFS transporter n=1 Tax=Streptomyces sp. Ru87 TaxID=2044307 RepID=A0A2B8AS87_9ACTN) HSP 1 Score: 52.8 bits (125), Expect = 4.680e-5 Identity = 47/114 (41.23%), Postives = 62/114 (54.39%), Query Frame = 1 Query: 25 IAATADPVFEANRTALIVDLVPEDDY----PSAIQVAGAINQAAQLAGFASGGLLAALLGASGALALNGVTFLFSALLLSQIRTRTETQRSGS-----KPKLSHAYRFLANDRV 339 + A PVF R A + D++ E D S I++ ++QAAQLAGFA+GGLL A L GAL + VTFL SALLL ++ TR R G + LS LA+ R+ Sbjct: 120 LTALVAPVFTGTRAASLGDILGEGDLFVLGRSLIRI---VSQAAQLAGFAAGGLLIAALSPRGALGVTVVTFLGSALLL-RLGTRRRPARGGGAGPVLRSSLSGTGALLADRRI 229
BLAST of mRNA_M-pyrifera_M_contig105058.1085.1 vs. uniprot
Match: A0A7R7HY04_9ACTN (MFS transporter n=2 Tax=Actinocatenispora thailandica TaxID=227318 RepID=A0A7R7HY04_9ACTN) HSP 1 Score: 52.4 bits (124), Expect = 6.390e-5 Identity = 58/157 (36.94%), Postives = 76/157 (48.41%), Query Frame = 1 Query: 28 AATADPVFEANRTALIVDLVPEDDYPSAIQVAGAINQAAQLAGFASGGLLAALLGASGALALNGVTFLFSALLLSQIRTRTETQRSGSKPKLSHAYRFL----ANDRVSMIAVATTFVTVACAMAIESQAVVYGGDIVDLSDAGTGLLAAVVPAATL 486 +AT P+F A R A I ++VP A + + QAAQLAGFA GGLL L+ AL F+ SALLL +I TR R G+ L + R L R+ + +A +V A+A E+ A Y I G GLL VPA T+ Sbjct: 135 SATVTPIFGAARAASIPEIVPGPAAVLARSLIRVVTQAAQLAGFAVGGLLLVLVSPRFALVGEAAGFVVSALLL-RIGTRWRPARGGAGSMLGDSVRGLRAVFGAPRIRAL-LALWWVPPVFAVAPEALAAPYAHGI-GQGPVGLGLLMTAVPAGTV 288
BLAST of mRNA_M-pyrifera_M_contig105058.1085.1 vs. uniprot
Match: A0A5P9PEV3_9PSEU (Enterobactin exporter EntS n=2 Tax=Amycolatopsis sp. YIM 10 TaxID=2653857 RepID=A0A5P9PEV3_9PSEU) HSP 1 Score: 52.4 bits (124), Expect = 6.480e-5 Identity = 38/98 (38.78%), Postives = 57/98 (58.16%), Query Frame = 1 Query: 13 IVVTIAATADPVFEANRTALIVDLVPEDDYPSAIQVAGAINQAAQLAGFASGGLLAALLGASGALALNGVTFLFSALLLS---QIRTRTETQRSGSKP 297 ++ + A+A P F+A + ALI ++ D Y + + Q Q+AGF +GG+L ALLG SG LA+N VTF SALL+ + R +Q +G +P Sbjct: 111 LIAVLTASAAP-FKAAQLALIPTMLSADLYQAGLAARQMSVQVVQVAGFGAGGVLVALLGPSGVLAVNAVTFTLSALLIVIGVRSRPAARSQDAGGQP 207
BLAST of mRNA_M-pyrifera_M_contig105058.1085.1 vs. uniprot
Match: A0A1C6QCZ1_9ACTN (Transmembrane secretion effector n=8 Tax=Streptomyces TaxID=1883 RepID=A0A1C6QCZ1_9ACTN) HSP 1 Score: 52.4 bits (124), Expect = 6.490e-5 Identity = 54/166 (32.53%), Postives = 84/166 (50.60%), Query Frame = 1 Query: 7 LVIVVTIAATADPVFEANRTALIVDLVPEDD-YPSAIQVAGAINQAAQLAGFASGGLLAALLGASGALALNGVTFLFSALLLSQIRTRTETQRSGSK---------PKLSHAYRFLANDRVSMIAVATTFVTVACAMAIESQAVVYGGDIVDLSDAGTGLLAAVVP 474 L+++ + A PVF R A + +++ E + + V +NQ+AQLAGFA+GGLL ++ LAL FL SALLL ++ T R G++ L R LA+ RV + + T++ A + E+ V Y G ++ + AGTGLL +P Sbjct: 135 LLVLRCVLAAIAPVFAGTRAATLGEILGEGELFVLGRSVIRIVNQSAQLAGFAAGGLLLVVVSPGAVLALTAGAFLGSALLL-RLGTLARPARDGARGAERGALLAASLGGIRRLLADRRVRALLL-LTWLPPAFVVIPEALLVAYAG-LLGVGPAGTGLLMCAMP 297 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105058.1085.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig105058.1085.1 >prot_M-pyrifera_M_contig105058.1085.1 ID=prot_M-pyrifera_M_contig105058.1085.1|Name=mRNA_M-pyrifera_M_contig105058.1085.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp LPLVIVVTIAATADPVFEANRTALIVDLVPEDDYPSAIQVAGAINQAAQLback to top mRNA from alignment at M-pyrifera_M_contig105058:48..533+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig105058.1085.1 ID=mRNA_M-pyrifera_M_contig105058.1085.1|Name=mRNA_M-pyrifera_M_contig105058.1085.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig105058:48..533+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig105058:48..533+ >mRNA_M-pyrifera_M_contig105058.1085.1 ID=mRNA_M-pyrifera_M_contig105058.1085.1|Name=mRNA_M-pyrifera_M_contig105058.1085.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=972bp|location=Sequence derived from alignment at M-pyrifera_M_contig105058:48..533+ (Macrocystis pyrifera P11B4 male)back to top |