mRNA_M-pyrifera_M_contig104997.1079.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig104997.1079.1
Unique NamemRNA_M-pyrifera_M_contig104997.1079.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig104997.1079.1 vs. uniprot
Match: A0A7S4LLF2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLF2_9EUGL)

HSP 1 Score: 105 bits (263), Expect = 8.270e-24
Identity = 71/167 (42.51%), Postives = 87/167 (52.10%), Query Frame = 1
Query:    1 GELEVRLEVGGGGGGLVEQKVEVAFA--CRSLE-QSFQYSFIAKDGAYAYAAAIAPLPPQPPA---ILHTPT----------------------PILVSFHGTGVTARGQADAYKLKAHPPRKVDGGTEEDYTFGVEGVWVVAPERHGAHNWEGVGLETAEVARATL 417
            G     L+VG    G V   V+ +F   CRSL  QSFQ++F+  DGA  +AAAIAPL P   +   +L T +                      P++++ HGTGV A  QADAYK K           + DYTFGVEG WV+AP RHGAHNWEGVG  TA  A   L
Sbjct:  400 GSCPALLQVGVSVDGTVISNVQQSFTLRCRSLATQSFQFTFLDHDGAIGHAAAIAPLLPASSSHLKVLSTNSGERVQKSAELCSSSKYCWNRKWPVIMTLHGTGVKATAQADAYKYKQDK--------QGDYTFGVEGAWVLAPSRHGAHNWEGVGRHTAIAALVHL 558          
BLAST of mRNA_M-pyrifera_M_contig104997.1079.1 vs. uniprot
Match: A0A812JK70_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812JK70_9DINO)

HSP 1 Score: 100 bits (250), Expect = 1.610e-23
Identity = 62/137 (45.26%), Postives = 75/137 (54.74%), Query Frame = 1
Query:    1 GELEVRLEVGGGGGGLVEQK--VEVAFACRSLEQSFQYSFIAKDGAYAYAAAIAPLPPQPPAILHTPTPILVSFHGTGVTARGQADAYKLKAHPPRKVDGGTEEDYTFGVEGVWVVAPERHGAHNWEGVGLETAEVA 405
            GE  +RL   G   G V Q   + V   CR   QSF Y+F   DG+  +AAA+ P   Q     H   P+L+S  GT ++AR  AD+YK KA           EDYTFGV G W++AP RHGAHNWEG GL TA  A
Sbjct:   87 GEKSLRLAFEGAVAGKVVQSSPLRVKLQCRRSTQSFVYTFQDVDGSTQHAAAVLP---QTDCGGHA-CPVLISLSGTSISARDSADSYKFKARG--------SEDYTFGVHGAWLIAPTRHGAHNWEGPGLATARGA 211          
BLAST of mRNA_M-pyrifera_M_contig104997.1079.1 vs. uniprot
Match: UPI0014553F50 (uncharacterized secreted protein ARB_06907-like isoform X1 n=3 Tax=Asterias rubens TaxID=7604 RepID=UPI0014553F50)

HSP 1 Score: 99.4 bits (246), Expect = 1.600e-21
Identity = 60/138 (43.48%), Postives = 79/138 (57.25%), Query Frame = 1
Query:    4 ELEVRLEVGGGGGGLVEQKVEVAFACRSLEQSFQYSFIAKDGAYAYAAAIAPLPPQPPAILHTPTPILVSFHGTGVTARGQADAYKLKAHPPRKVDGGTEEDYTFGVEGVWVVAPERHGAHNWEGVGLETAEVARATL 417
            E  + LEV   G G   Q + V   CR   +SF ++FI  DG+  +AAAI PL   P A+     P+L++ HGTGV A+ QAD+YK      +  DG    ++ FG+E  WV+AP RHGAHNWEG G  TA  +  TL
Sbjct:  380 ETVLPLEVSSAGSG--SQPISVTLRCRKAAESFIFTFIDHDGSIQHAAAILPLMDCPGAMC----PVLLTLHGTGVGAQNQADSYK------QMQDG----NWIFGLENAWVLAPTRHGAHNWEGPGALTAMTSLQTL 501          
BLAST of mRNA_M-pyrifera_M_contig104997.1079.1 vs. uniprot
Match: A0A1Q9DYZ9_SYMMI (Uncharacterized protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DYZ9_SYMMI)

HSP 1 Score: 96.7 bits (239), Expect = 7.130e-21
Identity = 61/137 (44.53%), Postives = 75/137 (54.74%), Query Frame = 1
Query:    1 GELEVRLEVGGGGGGLVEQK--VEVAFACRSLEQSFQYSFIAKDGAYAYAAAIAPLPPQPPAILHTPTPILVSFHGTGVTARGQADAYKLKAHPPRKVDGGTEEDYTFGVEGVWVVAPERHGAHNWEGVGLETAEVA 405
            GE  +RL   G   G V Q   + V   CR   QSF Y+F   DG+  +AAA+ P             P+L+S  GT ++AR  AD+YK K      V G   EDYTFGV+G W++AP RHGAHNWEG GL TA  A
Sbjct:  277 GEKSLRLAFEGTVAGKVVQSSPLRVKLQCRRSTQSFVYTFQDVDGSTQHAAAVLPQTDCG----GRACPVLISLSGTSISARDSADSYKFK------VRGA--EDYTFGVQGAWLIAPTRHGAHNWEGPGLATARGA 401          
BLAST of mRNA_M-pyrifera_M_contig104997.1079.1 vs. uniprot
Match: A0A6P4ZJ11_BRABE (uncharacterized secreted protein ARB_06907-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZJ11_BRABE)

HSP 1 Score: 96.7 bits (239), Expect = 1.400e-20
Identity = 53/134 (39.55%), Postives = 82/134 (61.19%), Query Frame = 1
Query:    4 ELEVRLEVGGGGGGLVEQKVEVAFACRSLEQSFQYSFIAKDGAYAYAAAIAPLPPQPPAILHTPTPILVSFHGTGVTARGQADAYKLKAHPPRKVDGGTEEDYTFGVEGVWVVAPERHGAHNWEGVGLETAEVA 405
            ++++ L+V G  G    Q + ++  CR+  QSF ++F+  DG+  +AAAI PL       + +  P+L++ HGTGV+A+ QAD+YK       +++GG   D+ FG+E  W +AP RHGAHNWEG G  T+  A
Sbjct:  378 DMKLTLQVSGSEGNT--QVITISLRCRTYGQSFVFTFLDHDGSVQHAAAIPPLQD----CVTSRCPVLLTHHGTGVSAQNQADSYK-------RMEGG---DWKFGIETAWTLAPTRHGAHNWEGPGALTSMTA 495          
BLAST of mRNA_M-pyrifera_M_contig104997.1079.1 vs. uniprot
Match: A0A813A5L2_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813A5L2_SYMMI)

HSP 1 Score: 96.7 bits (239), Expect = 1.430e-20
Identity = 61/137 (44.53%), Postives = 75/137 (54.74%), Query Frame = 1
Query:    1 GELEVRLEVGGGGGGLVEQK--VEVAFACRSLEQSFQYSFIAKDGAYAYAAAIAPLPPQPPAILHTPTPILVSFHGTGVTARGQADAYKLKAHPPRKVDGGTEEDYTFGVEGVWVVAPERHGAHNWEGVGLETAEVA 405
            GE  +RL   G   G V Q   + V   CR   QSF Y+F   DG+  +AAA+ P             P+L+S  GT ++AR  AD+YK K      V G   EDYTFGV+G W++AP RHGAHNWEG GL TA  A
Sbjct:  260 GEKSLRLAFEGTVAGKVVQSSPLRVKLQCRRSTQSFVYTFQDVDGSTQHAAAVLPQTDCG----GRACPVLISLSGTSISARDSADSYKFK------VRGA--EDYTFGVQGAWLIAPTRHGAHNWEGPGLATARGA 384          
BLAST of mRNA_M-pyrifera_M_contig104997.1079.1 vs. uniprot
Match: A0A8B7YN34_ACAPL (uncharacterized secreted protein ARB_06907-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YN34_ACAPL)

HSP 1 Score: 96.3 bits (238), Expect = 1.920e-20
Identity = 57/139 (41.01%), Postives = 77/139 (55.40%), Query Frame = 1
Query:    1 GELEVRLEVGGGGGGLVEQKVEVAFACRSLEQSFQYSFIAKDGAYAYAAAIAPLPPQPPAILHTPTPILVSFHGTGVTARGQADAYKLKAHPPRKVDGGTEEDYTFGVEGVWVVAPERHGAHNWEGVGLETAEVARATL 417
            G+  + LEV   G G   Q++ +   CR + +SF ++F   DG+  +AAAI PL   P    +   P+L++ HGTGV A+ QAD YK + H  R         + FG+E  WV+AP RHGAHNWEG G  TA  A   L
Sbjct:  377 GDTSLVLEVSSSGSG--SQQLPITLRCRKVGESFLFTFFDHDGSVQHAAAIQPLEDCP----NNVCPVLMTLHGTGVRAQNQADGYK-RMHNGR---------WIFGLETAWVLAPTRHGAHNWEGPGALTAMTALEVL 499          
BLAST of mRNA_M-pyrifera_M_contig104997.1079.1 vs. uniprot
Match: UPI0018D7F043 (uncharacterized secreted protein ARB_06907-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D7F043)

HSP 1 Score: 94.7 bits (234), Expect = 6.360e-20
Identity = 60/139 (43.17%), Postives = 75/139 (53.96%), Query Frame = 1
Query:    1 GELEVRLEVGGGGGGLVEQKVEVAFACRSLEQSFQYSFIAKDGAYAYAAAIAPLPPQPPAILHTPTPILVSFHGTGVTARGQADAYKLKAHPPRKVDGGTEEDYTFGVEGVWVVAPERHGAHNWEGVGLETAEVARATL 417
            GE    LEV   G G   +++ V   CR   +SF ++F+  DG+   AAAI PL   P    +   P+L+S HGTGV A+ QAD YK      R  DG     + FG+E  WV+AP RHGAHNWEG G  TA  A   L
Sbjct:   55 GETSFVLEVTSQGSG--SKQLTVTLRCRKAGESFLFTFLDHDGSVQLAAAIQPLEDCP----NNVCPVLISLHGTGVGAQNQADGYK------RMQDGR----WIFGLETAWVLAPTRHGAHNWEGPGALTAMTALEIL 177          
BLAST of mRNA_M-pyrifera_M_contig104997.1079.1 vs. uniprot
Match: A0A8B7DNG3_HYDVU (uncharacterized protein LOC100209092 n=2 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7DNG3_HYDVU)

HSP 1 Score: 94.7 bits (234), Expect = 6.600e-20
Identity = 51/115 (44.35%), Postives = 70/115 (60.87%), Query Frame = 1
Query:   52 EQKVEVAFACRSLEQSFQYSFIAKDGAYAYAAAIAPLPPQPPAILHTPTPILVSFHGTGVTARGQADAYKLKAHPPRKVDGGTEEDYTFGVEGVWVVAPERHGAHNWEGVGLETA 396
            EQ++ +   CR + QSF ++FI  DG+  +AAAI PL P     L    P+L++ HGTGVTA+ QAD+YK   +            + FGV+ +W++AP RHGAHNWEG G  TA
Sbjct:  377 EQEMLLNLRCREVNQSFLFTFIDHDGSVQHAAAIQPLSP----CLLEKCPVLLTLHGTGVTAQNQADSYKYMKNGK----------FLFGVDKLWLLAPTRHGAHNWEGPGELTA 477          
BLAST of mRNA_M-pyrifera_M_contig104997.1079.1 vs. uniprot
Match: T2M3G7_HYDVU (Afadin-and alpha-actinin-binding protein (Fragment) n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2M3G7_HYDVU)

HSP 1 Score: 94.7 bits (234), Expect = 6.880e-20
Identity = 51/115 (44.35%), Postives = 70/115 (60.87%), Query Frame = 1
Query:   52 EQKVEVAFACRSLEQSFQYSFIAKDGAYAYAAAIAPLPPQPPAILHTPTPILVSFHGTGVTARGQADAYKLKAHPPRKVDGGTEEDYTFGVEGVWVVAPERHGAHNWEGVGLETA 396
            EQ++ +   CR + QSF ++FI  DG+  +AAAI PL P     L    P+L++ HGTGVTA+ QAD+YK   +            + FGV+ +W++AP RHGAHNWEG G  TA
Sbjct:  897 EQEMLLNLRCREVNQSFLFTFIDHDGSVQHAAAIQPLSP----CLLEKCPVLLTLHGTGVTAQNQADSYKYMKNGK----------FLFGVDKLWLLAPTRHGAHNWEGPGELTA 997          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104997.1079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4LLF2_9EUGL8.270e-2442.51Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A812JK70_9DINO1.610e-2345.26Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
UPI0014553F501.600e-2143.48uncharacterized secreted protein ARB_06907-like is... [more]
A0A1Q9DYZ9_SYMMI7.130e-2144.53Uncharacterized protein n=1 Tax=Symbiodinium micro... [more]
A0A6P4ZJ11_BRABE1.400e-2039.55uncharacterized secreted protein ARB_06907-like n=... [more]
A0A813A5L2_SYMMI1.430e-2044.53Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A8B7YN34_ACAPL1.920e-2041.01uncharacterized secreted protein ARB_06907-like n=... [more]
UPI0018D7F0436.360e-2043.17uncharacterized secreted protein ARB_06907-like n=... [more]
A0A8B7DNG3_HYDVU6.600e-2044.35uncharacterized protein LOC100209092 n=2 Tax=Hydra... [more]
T2M3G7_HYDVU6.880e-2044.35Afadin-and alpha-actinin-binding protein (Fragment... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104997contigM-pyrifera_M_contig104997:24..440 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score94.4
Seed ortholog evalue4.6e-17
Seed eggNOG ortholog6087.XP_002155448.2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
EggNOG OGs3A1SU@33154,3BQAZ@33208,COG1052@1,KOG0069@2759
COG Functional cat.C
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons1
Model size417
Cds size417
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815558.3171968-CDS-M-pyrifera_M_contig104997:23..4401622815558.3171968-CDS-M-pyrifera_M_contig104997:23..440Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104997 24..440 +
1692277463.242876-CDS-M-pyrifera_M_contig104997:23..4401692277463.242876-CDS-M-pyrifera_M_contig104997:23..440Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104997 24..440 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104997.1079.1prot_M-pyrifera_M_contig104997.1079.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig104997 24..440 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig104997.1079.1

>prot_M-pyrifera_M_contig104997.1079.1 ID=prot_M-pyrifera_M_contig104997.1079.1|Name=mRNA_M-pyrifera_M_contig104997.1079.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp
GELEVRLEVGGGGGGLVEQKVEVAFACRSLEQSFQYSFIAKDGAYAYAAA
IAPLPPQPPAILHTPTPILVSFHGTGVTARGQADAYKLKAHPPRKVDGGT
EEDYTFGVEGVWVVAPERHGAHNWEGVGLETAEVARATL
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mRNA from alignment at M-pyrifera_M_contig104997:24..440+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig104997.1079.1 ID=mRNA_M-pyrifera_M_contig104997.1079.1|Name=mRNA_M-pyrifera_M_contig104997.1079.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=417bp|location=Sequence derived from alignment at M-pyrifera_M_contig104997:24..440+ (Macrocystis pyrifera P11B4 male)
GGTGAGTTGGAGGTGCGGTTGGAAGTTGGTGGGGGTGGAGGGGGATTGGT GGAGCAGAAAGTAGAGGTTGCCTTTGCGTGTCGTAGTTTGGAGCAATCGT TTCAATACTCTTTCATTGCGAAAGATGGCGCATATGCGTACGCAGCTGCC ATTGCCCCTCTTCCCCCACAACCTCCTGCCATCTTGCACACACCCACTCC CATTCTGGTATCATTTCATGGCACTGGAGTGACAGCAAGAGGACAAGCAG ATGCCTACAAGCTCAAGGCTCACCCACCACGCAAAGTGGACGGTGGGACA GAGGAAGACTACACGTTTGGAGTGGAGGGTGTGTGGGTGGTGGCACCTGA GCGACATGGAGCTCACAATTGGGAAGGAGTGGGATTGGAAACCGCAGAAG TTGCTCGTGCCACTCTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig104997:24..440+

>mRNA_M-pyrifera_M_contig104997.1079.1 ID=mRNA_M-pyrifera_M_contig104997.1079.1|Name=mRNA_M-pyrifera_M_contig104997.1079.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig104997:24..440+ (Macrocystis pyrifera P11B4 male)
GGTGAGTTGGAGGTGCGGTTGGAAGTTGGTGGGGGTGGAGGGGGATTGGT
GGAGCAGAAAGTAGAGGTTGCCTTTGCGTGTCGTAGTTTGGAGCAATCGT
TTCAATACTCTTTCATTGCGAAAGATGGCGCATATGCGTACGCAGCTGCC
ATTGCCCCTCTTCCCCCACAACCTCCTGCCATCTTGCACACACCCACTCC
CATTCTGGTATCATTTCATGGCACTGGAGTGACAGCAAGAGGACAAGCAG
ATGCCTACAAGCTCAAGGCTCACCCACCACGCAAAGTGGACGGTGGGACA
GAGGAAGACTACACGTTTGGAGTGGAGGGTGTGTGGGTGGTGGCACCTGA
GCGACATGGAGCTCACAATTGGGAAGGAGTGGGATTGGAAACCGCAGAAG
TTGCTCGTGCCACTCTCGGTGAGTTGGAGGTGCGGTTGGAAGTTGGTGGG
GGTGGAGGGGGATTGGTGGAGCAGAAAGTAGAGGTTGCCTTTGCGTGTCG
TAGTTTGGAGCAATCGTTTCAATACTCTTTCATTGCGAAAGATGGCGCAT
ATGCGTACGCAGCTGCCATTGCCCCTCTTCCCCCACAACCTCCTGCCATC
TTGCACACACCCACTCCCATTCTGGTATCATTTCATGGCACTGGAGTGAC
AGCAAGAGGACAAGCAGATGCCTACAAGCTCAAGGCTCACCCACCACGCA
AAGTGGACGGTGGGACAGAGGAAGACTACACGTTTGGAGTGGAGGGTGTG
TGGGTGGTGGCACCTGAGCGACATGGAGCTCACAATTGGGAAGGAGTGGG
ATTGGAAACCGCAGAAGTTGCTCGTGCCACTCTC
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